Cow genome map
| Conread name: | Liv1-LVRM10114E02 |
| Conread position: | 9-499 |
| Cow position: | chr27:13705433-13704935 (view UCSC Genome Browser custom track) |
| Alignm length: | 505 |
| Alignm identity: | 380 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 221 |
| Conread position: | 10-513 |
| Cow position: | chr27:22441450-22441966 (view UCSC Genome Browser custom track) |
| Alignm length: | 520 |
| Alignm identity: | 419 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 84 |
| Conread position: | 13-511 |
| Cow position: | chr27:11595878-11596371 (view UCSC Genome Browser custom track) |
| Alignm length: | 512 |
| Alignm identity: | 379 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 259 |
| Conread position: | 14-497 |
| Cow position: | chr27:31212040-31211564 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 370 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 134, 33 |
| Conread position: | 14-513 |
| Cow position: | chr27:1790873-1791379 (view UCSC Genome Browser custom track) |
| Alignm length: | 514 |
| Alignm identity: | 395 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 39 |
| Conread position: | 14-528 |
| Cow position: | chr27:24716143-24715635 (view UCSC Genome Browser custom track) |
| Alignm length: | 524 |
| Alignm identity: | 410 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 39 |
| Conread position: | 15-150 |
| Cow position: | chr27:14693153-14693018 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 100 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 15-362 |
| Cow position: | chr27:15106575-15106220 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 136, 13 |
| Conread position: | 18-280 |
| Cow position: | chr27:204828-205078 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 195 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 39, 47 |
| Conread position: | 28-151 |
| Cow position: | chr27:26472361-26472483 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 101 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 29-372 |
| Cow position: | chr27:27714466-27714820 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 261 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 116, 169 |
| Conread position: | 41-306 |
| Cow position: | chr27:20610746-20611016 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 204 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 108, 158 |
| Conread position: | 57-362 |
| Cow position: | chr27:4498880-4498579 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 130 |
| Conread position: | 59-362 |
| Cow position: | chr27:11478068-11478375 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 63 |
| Conread position: | 62-360 |
| Cow position: | chr27:24717478-24717780 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 254 |
| Conread position: | 64-367 |
| Cow position: | chr27:29520922-29521232 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 137 |
| Conread position: | 77-354 |
| Cow position: | chr27:2973810-2973523 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 216 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 76, 56 |
| Conread position: | 83-513 |
| Cow position: | chr27:24722734-24722288 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 118 |
| Conread position: | 86-362 |
| Cow position: | chr27:29673922-29673641 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 210 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 83 |
| Conread position: | 97-362 |
| Cow position: | chr27:26124363-26124637 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 102 |
| Conread position: | 191-516 |
| Cow position: | chr27:22630044-22629711 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 111 |
| Conread position: | 197-516 |
| Cow position: | chr27:15218360-15218037 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 52 |
| Conread position: | 199-510 |
| Cow position: | chr27:22277420-22277106 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 167 |
| Conread position: | 201-528 |
| Cow position: | chr27:15408659-15408331 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 66 |
| Conread position: | 203-497 |
| Cow position: | chr27:12472306-12472619 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 221 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 30, 167 |
| Conread position: | 274-513 |
| Cow position: | chr27:18736875-18736642 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 130, 19 |
| Conread position: | 280-511 |
| Cow position: | chr27:1644623-1644385 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 189 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 129 |
| Conread position: | 299-485 |
| Cow position: | chr27:22121397-22121576 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 142, 80 |
| Conread position: | 299-507 |
| Cow position: | chr27:9519388-9519178 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 149 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 104, 109 |
| Conread position: | 299-512 |
| Cow position: | chr27:13654246-13654030 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 158 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 86, 22 |
| Conread position: | 299-513 |
| Cow position: | chr27:6915752-6915968 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 167 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 105, 29 |
| Conread position: | 299-513 |
| Cow position: | chr27:25342405-25342194 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 105, 35 |
| Conread position: | 299-513 |
| Cow position: | chr27:28150751-28150968 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 169, 143 |
| Conread position: | 299-513 |
| Cow position: | chr27:30357130-30356921 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 102, 44 |
| Conread position: | 299-518 |
| Cow position: | chr27:6029821-6029605 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 105, 27 |
| Conread position: | 303-510 |
| Cow position: | chr27:30467216-30467021 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 151 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 52, 132 |
| Conread position: | 303-515 |
| Cow position: | chr27:22335147-22334933 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 100, 105 |
| Conread position: | 311-510 |
| Cow position: | chr27:20831936-20832137 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 31, 15 |
| Conread position: | 311-524 |
| Cow position: | chr27:29837044-29836830 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 171 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 158, 109 |
| Conread position: | 313-513 |
| Cow position: | chr27:15471611-15471814 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 160 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 88, 95 |
| Conread position: | 318-524 |
| Cow position: | chr27:6343388-6343587 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 155 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 86, 16 |
| Conread position: | 336-497 |
| Cow position: | chr27:205092-205256 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 140 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 133, 106 |
| Conread position: | 353-522 |
| Cow position: | chr27:25503306-25503476 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 50, 55 |
Show alignments to all cow chromosomes.