Cow genome map
| Conread name: | Liv1-LVRM10114E02 |
| Conread position: | 2-149 |
| Cow position: | chr28:19226385-19226238 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 110 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 27, 78 |
| Conread position: | 14-432 |
| Cow position: | chr28:11096026-11095603 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 43 |
| Conread position: | 15-147 |
| Cow position: | chr28:10779261-10779131 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 102 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 15-198 |
| Cow position: | chr28:10696004-10695820 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 16, 43 |
| Conread position: | 29-362 |
| Cow position: | chr28:1286954-1286607 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 250 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 118, 59 |
| Conread position: | 29-362 |
| Cow position: | chr28:1656270-1656623 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 137 |
| Conread position: | 29-362 |
| Cow position: | chr28:11279789-11279434 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 189 |
| Conread position: | 57-231 |
| Cow position: | chr28:32152947-32152778 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 131 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 105, 33 |
| Conread position: | 83-249 |
| Cow position: | chr28:11312022-11312196 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 68, 116 |
| Conread position: | 108-362 |
| Cow position: | chr28:18714069-18714322 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 193 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 44, 22 |
| Conread position: | 196-468 |
| Cow position: | chr28:11209480-11209761 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 212 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 37, 179 |
| Conread position: | 196-510 |
| Cow position: | chr28:34697257-34697566 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 119 |
| Conread position: | 199-472 |
| Cow position: | chr28:4564009-4564260 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 207 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 34, 126 |
| Conread position: | 199-513 |
| Cow position: | chr28:5709379-5709679 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 68 |
| Conread position: | 233-402 |
| Cow position: | chr28:23011217-23011389 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 97, 10 |
| Conread position: | 247-498 |
| Cow position: | chr28:22834753-22835022 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 193 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 8, 117 |
| Conread position: | 253-583 |
| Cow position: | chr28:30418289-30418614 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 230 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 12, 60 |
| Conread position: | 268-513 |
| Cow position: | chr28:5978762-5978529 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 174 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 136, 28 |
| Conread position: | 299-462 |
| Cow position: | chr28:462780-462616 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 124 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 132, 105 |
| Conread position: | 299-498 |
| Cow position: | chr28:18493622-18493821 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 174, 27 |
| Conread position: | 299-510 |
| Cow position: | chr28:13048870-13049074 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 155 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 166, 56 |
| Conread position: | 299-510 |
| Cow position: | chr28:26290792-26290592 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 70, 27 |
| Conread position: | 299-512 |
| Cow position: | chr28:28602372-28602162 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 156 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 175, 27 |
| Conread position: | 299-513 |
| Cow position: | chr28:1521115-1521324 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 105, 27 |
| Conread position: | 299-513 |
| Cow position: | chr28:12078595-12078384 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 164 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 104, 24 |
| Conread position: | 299-513 |
| Cow position: | chr28:30613192-30612981 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 105, 27 |
| Conread position: | 299-517 |
| Cow position: | chr28:11772351-11772572 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 171 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 102, 109 |
| Conread position: | 299-523 |
| Cow position: | chr28:10144775-10144994 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 105, 27 |
| Conread position: | 299-523 |
| Cow position: | chr28:28556182-28556410 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 175 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 104, 109 |
| Conread position: | 303-518 |
| Cow position: | chr28:26861083-26861298 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 169, 23 |
| Conread position: | 311-513 |
| Cow position: | chr28:5197436-5197227 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 156 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 88, 43 |
| Conread position: | 311-513 |
| Cow position: | chr28:33322061-33321862 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 93, 21 |
| Conread position: | 312-513 |
| Cow position: | chr28:1464671-1464472 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 152 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 162, 22 |
| Conread position: | 313-513 |
| Cow position: | chr28:9697201-9697007 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 153, 87 |
| Conread position: | 317-508 |
| Cow position: | chr28:13646419-13646219 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 86, 91 |
| Conread position: | 317-513 |
| Cow position: | chr28:30048158-30048359 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 157 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 91, 129 |
| Conread position: | 421-511 |
| Cow position: | chr28:11095326-11095237 (view UCSC Genome Browser custom track) |
| Alignm length: | 91 |
| Alignm identity: | 80 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 23, 0 |
Show alignments to all cow chromosomes.