Cow genome map

Conread name: Liv1-LVRM10114E02

Conread position: 4-304
Cow position: chr3:30048758-30048456 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 35

Conread position: 14-297
Cow position: chr3:40347646-40347360 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 218
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 84, 13

Conread position: 15-155
Cow position: chr3:69219785-69219925 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 105
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 127, 72

Conread position: 15-177
Cow position: chr3:75076686-75076853 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 128
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 6, 93

Conread position: 15-179
Cow position: chr3:28925793-28925958 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 131
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 14, 89

Conread position: 15-179
Cow position: chr3:36543423-36543595 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 125
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 121, 0

Conread position: 15-289
Cow position: chr3:19134707-19134980 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 205
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 79, 68

Conread position: 15-583
Cow position: chr3:7146223-7146789 (view UCSC Genome Browser custom track)
Alignm length: 587
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 94

Conread position: 16-170
Cow position: chr3:59579516-59579359 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 123
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 31, 40

Conread position: 16-320
Cow position: chr3:5053130-5052826 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 117

Conread position: 24-155
Cow position: chr3:56389286-56389154 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 100
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 120, 0

Conread position: 28-162
Cow position: chr3:37255636-37255771 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 106
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 89, 113

Conread position: 29-362
Cow position: chr3:9255755-9255440 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 203, 128

Conread position: 29-362
Cow position: chr3:19230483-19230143 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 174

Conread position: 29-362
Cow position: chr3:67816241-67815895 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 216

Conread position: 37-362
Cow position: chr3:21714733-21715056 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 139

Conread position: 52-310
Cow position: chr3:14756158-14756421 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 201
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 11, 35

Conread position: 59-254
Cow position: chr3:21134887-21135087 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 149
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 74, 48

Conread position: 63-360
Cow position: chr3:40566687-40567007 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 234
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 76, 0

Conread position: 64-319
Cow position: chr3:71471010-71470739 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 0

Conread position: 86-454
Cow position: chr3:63496339-63495958 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 123

Conread position: 93-306
Cow position: chr3:53214533-53214749 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 157
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 61, 37

Conread position: 93-359
Cow position: chr3:14185767-14185487 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 209
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 59, 103

Conread position: 99-310
Cow position: chr3:6711960-6712172 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 160
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 53, 100

Conread position: 110-363
Cow position: chr3:68661635-68661895 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 62

Conread position: 129-368
Cow position: chr3:58594931-58594684 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 240

Conread position: 182-398
Cow position: chr3:74797064-74797288 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 176
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 51, 71

Conread position: 191-510
Cow position: chr3:29842741-29842417 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 36

Conread position: 193-393
Cow position: chr3:28717047-28716834 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 159
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 24, 30

Conread position: 193-510
Cow position: chr3:9188256-9187949 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 96

Conread position: 196-496
Cow position: chr3:54563811-54563508 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 90

Conread position: 199-429
Cow position: chr3:60492409-60492177 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 0

Conread position: 199-474
Cow position: chr3:62740240-62739970 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 13

Conread position: 199-509
Cow position: chr3:51415002-51414690 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 37

Conread position: 199-582
Cow position: chr3:59579355-59578967 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 102

Conread position: 202-505
Cow position: chr3:81991636-81991944 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 52

Conread position: 212-496
Cow position: chr3:41407823-41408115 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 210
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 21, 142

Conread position: 218-516
Cow position: chr3:36747996-36747694 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 37

Conread position: 221-380
Cow position: chr3:3643305-3643468 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 127
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 11, 78

Conread position: 233-429
Cow position: chr3:81527288-81527483 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 153
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 60, 133

Conread position: 238-509
Cow position: chr3:74406829-74406569 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 203
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 11, 90

Conread position: 238-516
Cow position: chr3:21278002-21278266 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 210
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 55, 28

Conread position: 246-497
Cow position: chr3:7813196-7813458 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 186
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 50, 117

Conread position: 255-402
Cow position: chr3:548377-548230 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 113
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 77, 110

Conread position: 268-509
Cow position: chr3:28629846-28630089 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 97

Conread position: 269-510
Cow position: chr3:60535805-60535566 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 117

Conread position: 297-513
Cow position: chr3:23654521-23654307 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 156
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 177, 34

Conread position: 299-498
Cow position: chr3:13636421-13636623 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 149
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 102, 109

Conread position: 299-499
Cow position: chr3:6950088-6950285 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 157
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 104, 33

Conread position: 299-499
Cow position: chr3:30245942-30245739 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 155
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 105, 109

Conread position: 299-513
Cow position: chr3:2085790-2085578 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 166
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 105, 22

Conread position: 299-513
Cow position: chr3:2119511-2119297 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 168
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 104, 114

Conread position: 299-513
Cow position: chr3:24156329-24156542 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 153
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 99, 0

Conread position: 299-513
Cow position: chr3:24503366-24503577 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 169
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 105, 22

Conread position: 299-513
Cow position: chr3:45171293-45171509 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 165
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 88, 27

Conread position: 299-513
Cow position: chr3:60494856-60494634 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 163
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 104, 27

Conread position: 299-513
Cow position: chr3:67824170-67824371 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 163
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 104, 27

Conread position: 299-513
Cow position: chr3:77691832-77692038 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 164
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 100, 27

Conread position: 299-513
Cow position: chr3:81368135-81368344 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 164
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 17, 36

Conread position: 299-516
Cow position: chr3:5640982-5640768 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 167
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 105, 27

Conread position: 311-508
Cow position: chr3:48566129-48565928 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 153
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 93, 97

Conread position: 311-513
Cow position: chr3:23034879-23035081 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 158
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 93, 17

Conread position: 311-518
Cow position: chr3:33158740-33158937 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 158
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 166, 15

Conread position: 313-513
Cow position: chr3:32185648-32185449 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 150
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 99, 11

Conread position: 313-513
Cow position: chr3:48337785-48337590 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 144
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 90, 95

Conread position: 316-518
Cow position: chr3:54325341-54325548 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 154
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 83, 92

Show alignments to all cow chromosomes.