Cow genome map
| Conread name: | Liv1-LVRM10114E02 |
| Conread position: | 14-513 |
| Cow position: | chr4:44846992-44847486 (view UCSC Genome Browser custom track) |
| Alignm length: | 510 |
| Alignm identity: | 400 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 175 |
| Conread position: | 14-513 |
| Cow position: | chr4:53659379-53658873 (view UCSC Genome Browser custom track) |
| Alignm length: | 516 |
| Alignm identity: | 412 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 65 |
| Conread position: | 16-381 |
| Cow position: | chr4:11689374-11689741 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 131, 263 |
| Conread position: | 16-513 |
| Cow position: | chr4:121474-121980 (view UCSC Genome Browser custom track) |
| Alignm length: | 512 |
| Alignm identity: | 414 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 130, 182 |
| Conread position: | 28-363 |
| Cow position: | chr4:20219404-20219730 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 204, 11 |
| Conread position: | 29-360 |
| Cow position: | chr4:63082312-63082646 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 250 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 118, 78 |
| Conread position: | 41-305 |
| Cow position: | chr4:11142812-11142549 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 195 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 53, 27 |
| Conread position: | 48-348 |
| Cow position: | chr4:20906997-20907304 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 9 |
| Conread position: | 59-310 |
| Cow position: | chr4:12262821-12263078 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 185 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 59, 105 |
| Conread position: | 60-349 |
| Cow position: | chr4:60942588-60942288 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 218 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 90, 30 |
| Conread position: | 63-362 |
| Cow position: | chr4:45986353-45986651 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 58 |
| Conread position: | 82-362 |
| Cow position: | chr4:61680219-61680506 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 116 |
| Conread position: | 83-361 |
| Cow position: | chr4:40252189-40252467 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 56 |
| Conread position: | 143-332 |
| Cow position: | chr4:2684834-2685023 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 22, 38 |
| Conread position: | 183-442 |
| Cow position: | chr4:66013598-66013865 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 185 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 49, 8 |
| Conread position: | 199-346 |
| Cow position: | chr4:11011731-11011876 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 121 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 37, 109 |
| Conread position: | 199-509 |
| Cow position: | chr4:23690425-23690722 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 32 |
| Conread position: | 199-510 |
| Cow position: | chr4:21005846-21005539 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 56 |
| Conread position: | 199-511 |
| Cow position: | chr4:43404325-43404638 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 210 |
| Conread position: | 199-513 |
| Cow position: | chr4:32008701-32008387 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 130 |
| Conread position: | 200-508 |
| Cow position: | chr4:68407294-68406985 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 60 |
| Conread position: | 210-510 |
| Cow position: | chr4:42962059-42961765 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 23 |
| Conread position: | 221-509 |
| Cow position: | chr4:10861146-10861426 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 34 |
| Conread position: | 267-510 |
| Cow position: | chr4:62625435-62625204 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 26, 68 |
| Conread position: | 274-512 |
| Cow position: | chr4:41852822-41853060 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 185 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 129, 18 |
| Conread position: | 294-508 |
| Cow position: | chr4:63218250-63218455 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 155 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 109, 9 |
| Conread position: | 299-499 |
| Cow position: | chr4:57571825-57572021 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 148 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 175, 27 |
| Conread position: | 299-508 |
| Cow position: | chr4:55844520-55844733 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 105, 77 |
| Conread position: | 299-513 |
| Cow position: | chr4:4952251-4952041 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 165 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 113, 27 |
| Conread position: | 299-513 |
| Cow position: | chr4:13516048-13515832 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 165 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 105, 109 |
| Conread position: | 299-513 |
| Cow position: | chr4:16007011-16007215 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 156 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 299-513 |
| Cow position: | chr4:25586648-25586443 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 174, 27 |
| Conread position: | 299-518 |
| Cow position: | chr4:50629737-50629520 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 105, 22 |
| Conread position: | 310-523 |
| Cow position: | chr4:43350980-43351191 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 94, 57 |
| Conread position: | 311-447 |
| Cow position: | chr4:67174716-67174847 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 105 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 311-509 |
| Cow position: | chr4:57262861-57262660 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 102, 15 |
| Conread position: | 311-510 |
| Cow position: | chr4:37488975-37489162 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 146 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 93, 18 |
| Conread position: | 311-513 |
| Cow position: | chr4:45462426-45462219 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 93, 101 |
| Conread position: | 311-513 |
| Cow position: | chr4:62609842-62609637 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 158 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 127, 43 |
| Conread position: | 311-513 |
| Cow position: | chr4:65042196-65042005 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 311-516 |
| Cow position: | chr4:19447582-19447370 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 32, 97 |
| Conread position: | 313-513 |
| Cow position: | chr4:66930197-66930396 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 99, 91 |
| Conread position: | 314-516 |
| Cow position: | chr4:10489891-10489688 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 164 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 90, 6 |
| Conread position: | 334-512 |
| Cow position: | chr4:64701430-64701610 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 70, 74 |
| Conread position: | 334-513 |
| Cow position: | chr4:64698055-64697874 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 143 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 70, 74 |
| Conread position: | 338-516 |
| Cow position: | chr4:11012115-11012290 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 145 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 65, 70 |
| Conread position: | 403-510 |
| Cow position: | chr4:67313048-67312941 (view UCSC Genome Browser custom track) |
| Alignm length: | 108 |
| Alignm identity: | 86 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.