Cow genome map
| Conread name: | Liv1-LVRM10114E02 |
| Conread position: | 4-179 |
| Cow position: | chr7:4454847-4454665 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 135 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 9, 50 |
| Conread position: | 14-157 |
| Cow position: | chr7:17439705-17439562 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 123 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 17, 139 |
| Conread position: | 16-362 |
| Cow position: | chr7:43899993-43899639 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 135, 104 |
| Conread position: | 27-365 |
| Cow position: | chr7:2127135-2127488 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 9 |
| Conread position: | 29-305 |
| Cow position: | chr7:20872692-20872966 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 203 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 65, 90 |
| Conread position: | 29-365 |
| Cow position: | chr7:33468865-33468512 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 200 |
| Conread position: | 29-372 |
| Cow position: | chr7:47884811-47884462 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 93 |
| Conread position: | 30-362 |
| Cow position: | chr7:5026727-5026381 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 177 |
| Conread position: | 57-310 |
| Cow position: | chr7:24411980-24411731 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 190 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 138, 100 |
| Conread position: | 59-362 |
| Cow position: | chr7:21994808-21994494 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 128 |
| Conread position: | 62-309 |
| Cow position: | chr7:28335404-28335659 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 137 |
| Conread position: | 63-362 |
| Cow position: | chr7:45939570-45939859 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 223 |
| Alignm E-value: | 8.99999e-40 |
| Alignm gaps (pig, cow): | 170, 12 |
| Conread position: | 63-432 |
| Cow position: | chr7:17219793-17220161 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 121 |
| Conread position: | 81-513 |
| Cow position: | chr7:32826328-32826760 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 358 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 39 |
| Conread position: | 85-252 |
| Cow position: | chr7:39782905-39783073 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 134 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 76, 64 |
| Conread position: | 95-306 |
| Cow position: | chr7:13826767-13826555 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 57, 141 |
| Conread position: | 164-362 |
| Cow position: | chr7:32919048-32919257 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 20, 112 |
| Conread position: | 184-407 |
| Cow position: | chr7:6320810-6320585 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 166 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 49, 15 |
| Conread position: | 193-516 |
| Cow position: | chr7:28895002-28894680 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 73 |
| Conread position: | 194-513 |
| Cow position: | chr7:16701848-16702170 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 210, 35 |
| Conread position: | 196-485 |
| Cow position: | chr7:38094685-38094974 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 223 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 55, 125 |
| Conread position: | 196-509 |
| Cow position: | chr7:25851780-25852093 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 71 |
| Conread position: | 196-510 |
| Cow position: | chr7:55697092-55697395 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 28 |
| Conread position: | 198-472 |
| Cow position: | chr7:49211792-49211517 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 213 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 107 |
| Conread position: | 198-510 |
| Cow position: | chr7:14869225-14869539 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 212 |
| Conread position: | 199-381 |
| Cow position: | chr7:10279082-10279261 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 137 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 34, 111 |
| Conread position: | 199-505 |
| Cow position: | chr7:2270189-2270496 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 211 |
| Conread position: | 199-516 |
| Cow position: | chr7:23456137-23456460 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 247 |
| Conread position: | 200-571 |
| Cow position: | chr7:16491667-16492065 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 250 |
| Conread position: | 204-361 |
| Cow position: | chr7:52896989-52896840 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 29, 60 |
| Conread position: | 217-510 |
| Cow position: | chr7:1822764-1822467 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 190 |
| Conread position: | 228-511 |
| Cow position: | chr7:57006187-57005915 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 99 |
| Conread position: | 233-500 |
| Cow position: | chr7:8734862-8734597 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 200 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 60, 133 |
| Conread position: | 235-399 |
| Cow position: | chr7:11431172-11431337 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 141 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 299-507 |
| Cow position: | chr7:76182-76386 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 104, 72 |
| Conread position: | 299-509 |
| Cow position: | chr7:44009967-44010168 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 172, 25 |
| Conread position: | 299-510 |
| Cow position: | chr7:907749-907536 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 169 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 172, 27 |
| Conread position: | 299-511 |
| Cow position: | chr7:12423714-12423507 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 104, 33 |
| Conread position: | 299-513 |
| Cow position: | chr7:5217087-5217301 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 104, 83 |
| Conread position: | 299-513 |
| Cow position: | chr7:7245469-7245679 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 104, 22 |
| Conread position: | 299-513 |
| Cow position: | chr7:8983258-8983041 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 169 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 105, 35 |
| Conread position: | 299-513 |
| Cow position: | chr7:14214610-14214824 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 160 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 136, 42 |
| Conread position: | 299-513 |
| Cow position: | chr7:28006561-28006350 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 105, 29 |
| Conread position: | 299-513 |
| Cow position: | chr7:33933254-33933039 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 171 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 104, 25 |
| Conread position: | 299-513 |
| Cow position: | chr7:37206906-37207109 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 299-513 |
| Cow position: | chr7:61777035-61776828 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 161 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 105, 109 |
| Conread position: | 299-567 |
| Cow position: | chr7:14420988-14420727 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 207 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 114, 64 |
| Conread position: | 300-508 |
| Cow position: | chr7:8041168-8040957 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 165 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 104, 108 |
| Conread position: | 303-511 |
| Cow position: | chr7:10035327-10035121 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 169 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 10, 106 |
| Conread position: | 311-523 |
| Cow position: | chr7:4544224-4544008 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 93, 97 |
| Conread position: | 313-513 |
| Cow position: | chr7:40457907-40457704 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 156 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 90, 95 |
| Conread position: | 336-483 |
| Cow position: | chr7:39174241-39174099 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 67, 18 |
| Conread position: | 377-521 |
| Cow position: | chr7:40708477-40708334 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 119 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 35, 29 |
Show alignments to all cow chromosomes.