Cow genome map
| Conread name: | Liv1-LVRM10114E02 |
| Conread position: | 5-120 |
| Cow position: | chr8:40044023-40044138 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 90 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 14-512 |
| Cow position: | chr8:1282312-1281824 (view UCSC Genome Browser custom track) |
| Alignm length: | 504 |
| Alignm identity: | 388 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 147, 93 |
| Conread position: | 15-158 |
| Cow position: | chr8:44480034-44479889 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 110 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 15-306 |
| Cow position: | chr8:5955450-5955751 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 222 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 28, 248 |
| Conread position: | 16-179 |
| Cow position: | chr8:45857737-45857905 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 132, 7 |
| Conread position: | 16-235 |
| Cow position: | chr8:40325327-40325101 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 170 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 20, 7 |
| Conread position: | 16-360 |
| Cow position: | chr8:54009242-54009598 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 97 |
| Conread position: | 20-150 |
| Cow position: | chr8:54317020-54316890 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 98 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 20-179 |
| Cow position: | chr8:4051617-4051784 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 126, 0 |
| Conread position: | 29-310 |
| Cow position: | chr8:21056103-21056383 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 212 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 37, 235 |
| Conread position: | 29-313 |
| Cow position: | chr8:24629102-24628815 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 211 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 106, 171 |
| Conread position: | 64-380 |
| Cow position: | chr8:13847687-13847370 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 36 |
| Conread position: | 68-385 |
| Cow position: | chr8:25582628-25582303 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 51 |
| Conread position: | 81-306 |
| Cow position: | chr8:12840979-12840747 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 183 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 66, 42 |
| Conread position: | 97-246 |
| Cow position: | chr8:52013437-52013279 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 193-360 |
| Cow position: | chr8:45857941-45858110 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 199-395 |
| Cow position: | chr8:9804598-9804400 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 163 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 199-481 |
| Cow position: | chr8:18715014-18714733 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 217 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 127 |
| Conread position: | 199-510 |
| Cow position: | chr8:51993831-51993516 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 129 |
| Conread position: | 199-512 |
| Cow position: | chr8:9826804-9826489 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 67 |
| Conread position: | 203-488 |
| Cow position: | chr8:24631403-24631689 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 195 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 29, 41 |
| Conread position: | 213-510 |
| Cow position: | chr8:48761109-48761407 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 176 |
| Conread position: | 235-513 |
| Cow position: | chr8:52013165-52012886 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 160 |
| Conread position: | 293-513 |
| Cow position: | chr8:19965180-19964959 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 168 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 108, 56 |
| Conread position: | 299-427 |
| Cow position: | chr8:50395014-50394885 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 103 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 105, 109 |
| Conread position: | 299-461 |
| Cow position: | chr8:51971973-51971809 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 124 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 105, 109 |
| Conread position: | 299-511 |
| Cow position: | chr8:37472610-37472396 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 163 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 105, 34 |
| Conread position: | 299-513 |
| Cow position: | chr8:51576130-51575914 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 156 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 172, 27 |
| Conread position: | 299-513 |
| Cow position: | chr8:52000803-52000591 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 177, 27 |
| Conread position: | 299-519 |
| Cow position: | chr8:36517094-36517313 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 216, 143 |
| Conread position: | 303-513 |
| Cow position: | chr8:37532846-37533062 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 167 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 100, 105 |
| Conread position: | 311-499 |
| Cow position: | chr8:6865003-6865193 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 92, 97 |
| Conread position: | 311-509 |
| Cow position: | chr8:51237372-51237573 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 147, 137 |
| Conread position: | 313-512 |
| Cow position: | chr8:43021091-43021289 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 159, 110 |
| Conread position: | 313-515 |
| Cow position: | chr8:1284494-1284294 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 150 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 88, 13 |
| Conread position: | 327-490 |
| Cow position: | chr8:8707012-8706854 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 77, 38 |
| Conread position: | 369-513 |
| Cow position: | chr8:53341680-53341827 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 35, 39 |
| Conread position: | 384-510 |
| Cow position: | chr8:9804134-9804009 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 104 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 20, 24 |
Show alignments to all cow chromosomes.