Cow genome map


           Conread name:
           Liv1-LVRM10114E02
        

               Conread position:
               15-231
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               133, 73
               

               Conread position:
               17-505
               

               Cow position:
               
               

               Alignm length:
               499
               

               Alignm identity:
               374
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               135, 84
               

               Conread position:
               20-362
               

               Cow position:
               
               

               Alignm length:
               357
               

               Alignm identity:
               249
               

               Alignm E-value:
               8.99998e-41
               

               Alignm gaps (pig, cow):
               19, 33
               

               Conread position:
               21-272
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               194
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               24, 55
               

               Conread position:
               27-310
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               219
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               119, 246
               

               Conread position:
               28-362
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               125, 206
               

               Conread position:
               29-362
               

               Cow position:
               
               

               Alignm length:
               350
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               118, 172
               

               Conread position:
               29-362
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 172
               

               Conread position:
               41-252
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               160
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               106, 145
               

               Conread position:
               52-361
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 49
               

               Conread position:
               59-320
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               189
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               88, 0
               

               Conread position:
               61-348
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               226
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 0
               

               Conread position:
               61-362
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               221
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               127, 91
               

               Conread position:
               62-362
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               222
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               40, 112
               

               Conread position:
               63-360
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               225
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               84, 135
               

               Conread position:
               65-362
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 69
               

               Conread position:
               66-362
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 20
               

               Conread position:
               66-362
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 54
               

               Conread position:
               66-371
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 55
               

               Conread position:
               78-310
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               191
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               69, 55
               

               Conread position:
               85-362
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               214
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 94
               

               Conread position:
               159-510
               

               Cow position:
               
               

               Alignm length:
               370
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 222
               

               Conread position:
               193-509
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               229
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               42, 69
               

               Conread position:
               196-496
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 15
               

               Conread position:
               196-510
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 79
               

               Conread position:
               197-516
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 136
               

               Conread position:
               198-516
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 160
               

               Conread position:
               199-347
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               124
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               34, 14
               

               Conread position:
               199-510
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 78
               

               Conread position:
               199-511
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 11
               

               Conread position:
               199-513
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 113
               

               Conread position:
               227-510
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               218
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 136
               

               Conread position:
               243-510
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               200
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               50, 123
               

               Conread position:
               243-511
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               201
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               50, 84
               

               Conread position:
               245-510
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               196
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               49, 116
               

               Conread position:
               296-510
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               166
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               105, 115
               

               Conread position:
               299-499
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               105, 27
               

               Conread position:
               299-513
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               165
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               175, 35
               

               Conread position:
               299-513
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               156
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               55, 34
               

               Conread position:
               299-513
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               153
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               105, 34
               

               Conread position:
               299-513
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               164
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               105, 24
               

               Conread position:
               299-513
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               159
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               104, 27
               

               Conread position:
               299-513
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               168
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               19, 110
               

               Conread position:
               299-513
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               155
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               173, 35
               

               Conread position:
               299-516
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               169
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               103, 22
               

               Conread position:
               299-518
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               166
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               105, 27
               

               Conread position:
               299-518
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               174
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               104, 109
               

               Conread position:
               311-493
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               142
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               23, 100
               

               Conread position:
               311-505
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               152
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               92, 10
               

               Conread position:
               311-513
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               93, 97
               

               Conread position:
               311-518
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               163
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               90, 97
               

               Conread position:
               312-513
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               153
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               160, 12
               

               Conread position:
               321-513
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               82, 13
               

               Conread position:
               325-510
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               143
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               146, 7
               

               Conread position:
               334-515
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               109, 0
               

               Conread position:
               337-513
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               123, 0
               

               Conread position:
               338-513
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               66, 70
               

               Conread position:
               350-513
               

               Cow position:
               
               

               Alignm length:
               165
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               116, 54
               

               Conread position:
               350-526
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               137
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               124, 54
               

               Conread position:
               382-510
               

               Cow position:
               
               

               Alignm length:
               134
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               19, 26
               

               Conread position:
               403-513
               

               Cow position:
               
               

               Alignm length:
               115
               

               Alignm identity:
               93
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               71, 41
               
Show alignments to all cow chromosomes.