Cow genome map
| Conread name: | Liv1-LVRM10127A01 |
| Conread position: | 1-389 |
| Cow position: | chr12:33119226-33119618 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 274 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 38, 120 |
| Conread position: | 1-417 |
| Cow position: | chr12:48471804-48471398 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 40 |
| Conread position: | 1-452 |
| Cow position: | chr12:11099296-11099740 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 44 |
| Conread position: | 1-452 |
| Cow position: | chr12:22204668-22204198 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 312 |
| Alignm E-value: | 8.99634e-43 |
| Alignm gaps (pig, cow): | 64, 33 |
| Conread position: | 1-452 |
| Cow position: | chr12:42858463-42858021 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 44 |
| Conread position: | 1-456 |
| Cow position: | chr12:1403568-1404019 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 25 |
| Conread position: | 1-456 |
| Cow position: | chr12:8677022-8676572 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 374, 44 |
| Conread position: | 1-456 |
| Cow position: | chr12:21209721-21210182 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 310 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 66, 40 |
| Conread position: | 1-456 |
| Cow position: | chr12:25099999-25099551 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 33 |
| Conread position: | 1-456 |
| Cow position: | chr12:27931830-27931391 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 44 |
| Conread position: | 1-456 |
| Cow position: | chr12:32654620-32655069 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 314 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 66, 40 |
| Conread position: | 1-593 |
| Cow position: | chr12:17979804-17980349 (view UCSC Genome Browser custom track) |
| Alignm length: | 600 |
| Alignm identity: | 435 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 50 |
| Conread position: | 1-594 |
| Cow position: | chr12:3209028-3209604 (view UCSC Genome Browser custom track) |
| Alignm length: | 607 |
| Alignm identity: | 394 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 77, 40 |
| Conread position: | 2-247 |
| Cow position: | chr12:35313317-35313089 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 176 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 137, 39 |
| Conread position: | 3-277 |
| Cow position: | chr12:38345336-38345070 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 188 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 59, 29 |
| Conread position: | 7-456 |
| Cow position: | chr12:27854884-27854447 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 38 |
| Conread position: | 8-342 |
| Cow position: | chr12:21387162-21386837 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 237 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 59, 33 |
| Conread position: | 8-397 |
| Cow position: | chr12:31202408-31202024 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 35 |
| Conread position: | 8-452 |
| Cow position: | chr12:21942821-21943257 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 21 |
| Conread position: | 12-549 |
| Cow position: | chr12:600275-599769 (view UCSC Genome Browser custom track) |
| Alignm length: | 540 |
| Alignm identity: | 361 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 363, 33 |
| Conread position: | 14-437 |
| Cow position: | chr12:3362025-3362441 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 171 |
| Conread position: | 17-452 |
| Cow position: | chr12:37560098-37560527 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 24 |
| Conread position: | 18-456 |
| Cow position: | chr12:1888468-1888041 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 11 |
| Conread position: | 22-427 |
| Cow position: | chr12:7863781-7863384 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 275 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 17, 112 |
| Conread position: | 29-387 |
| Cow position: | chr12:349508-349850 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 250 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 240, 21 |
| Conread position: | 30-456 |
| Cow position: | chr12:35345652-35346048 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 18 |
| Conread position: | 94-456 |
| Cow position: | chr12:14661183-14660832 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 263 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 45, 38 |
| Conread position: | 150-456 |
| Cow position: | chr12:21429222-21429526 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 202 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 29, 55 |
| Conread position: | 205-456 |
| Cow position: | chr12:34174380-34174635 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 20, 208 |
| Conread position: | 256-456 |
| Cow position: | chr12:24994646-24994445 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 39, 149 |
Show alignments to all cow chromosomes.