Cow genome map


           Conread name:
           Liv1-LVRM10127A01
        

               Conread position:
               1-387
               

               Cow position:
               
               

               Alignm length:
               391
               

               Alignm identity:
               285
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 33
               

               Conread position:
               1-397
               

               Cow position:
               
               

               Alignm length:
               403
               

               Alignm identity:
               278
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               66, 49
               

               Conread position:
               1-397
               

               Cow position:
               
               

               Alignm length:
               401
               

               Alignm identity:
               285
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               66, 41
               

               Conread position:
               1-450
               

               Cow position:
               
               

               Alignm length:
               454
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 42
               

               Conread position:
               1-452
               

               Cow position:
               
               

               Alignm length:
               454
               

               Alignm identity:
               301
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               77, 48
               

               Conread position:
               1-452
               

               Cow position:
               
               

               Alignm length:
               454
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 71
               

               Conread position:
               1-456
               

               Cow position:
               
               

               Alignm length:
               463
               

               Alignm identity:
               337
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 33
               

               Conread position:
               1-456
               

               Cow position:
               
               

               Alignm length:
               456
               

               Alignm identity:
               315
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               1-456
               

               Cow position:
               
               

               Alignm length:
               459
               

               Alignm identity:
               325
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 40
               

               Conread position:
               1-456
               

               Cow position:
               
               

               Alignm length:
               459
               

               Alignm identity:
               327
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 44
               

               Conread position:
               1-456
               

               Cow position:
               
               

               Alignm length:
               463
               

               Alignm identity:
               336
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 33
               

               Conread position:
               1-456
               

               Cow position:
               
               

               Alignm length:
               461
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               77, 46
               

               Conread position:
               1-456
               

               Cow position:
               
               

               Alignm length:
               464
               

               Alignm identity:
               333
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 184
               

               Conread position:
               1-456
               

               Cow position:
               
               

               Alignm length:
               463
               

               Alignm identity:
               332
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               288, 44
               

               Conread position:
               1-456
               

               Cow position:
               
               

               Alignm length:
               462
               

               Alignm identity:
               328
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 44
               

               Conread position:
               1-456
               

               Cow position:
               
               

               Alignm length:
               459
               

               Alignm identity:
               326
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 19
               

               Conread position:
               1-456
               

               Cow position:
               
               

               Alignm length:
               472
               

               Alignm identity:
               328
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               170, 25
               

               Conread position:
               1-527
               

               Cow position:
               
               

               Alignm length:
               531
               

               Alignm identity:
               334
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               286, 33
               

               Conread position:
               1-555
               

               Cow position:
               
               

               Alignm length:
               557
               

               Alignm identity:
               370
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               378, 25
               

               Conread position:
               3-294
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               199
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               33, 9
               

               Conread position:
               3-383
               

               Cow position:
               
               

               Alignm length:
               387
               

               Alignm identity:
               256
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               66, 39
               

               Conread position:
               7-433
               

               Cow position:
               
               

               Alignm length:
               428
               

               Alignm identity:
               279
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               376, 61
               

               Conread position:
               7-456
               

               Cow position:
               
               

               Alignm length:
               455
               

               Alignm identity:
               313
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 36
               

               Conread position:
               7-456
               

               Cow position:
               
               

               Alignm length:
               457
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 38
               

               Conread position:
               8-379
               

               Cow position:
               
               

               Alignm length:
               377
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 155
               

               Conread position:
               8-380
               

               Cow position:
               
               

               Alignm length:
               377
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 33
               

               Conread position:
               8-437
               

               Cow position:
               
               

               Alignm length:
               440
               

               Alignm identity:
               307
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 33
               

               Conread position:
               8-452
               

               Cow position:
               
               

               Alignm length:
               449
               

               Alignm identity:
               312
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 33
               

               Conread position:
               8-456
               

               Cow position:
               
               

               Alignm length:
               458
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 33
               

               Conread position:
               8-456
               

               Cow position:
               
               

               Alignm length:
               456
               

               Alignm identity:
               308
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 33
               

               Conread position:
               8-456
               

               Cow position:
               
               

               Alignm length:
               465
               

               Alignm identity:
               321
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 33
               

               Conread position:
               8-559
               

               Cow position:
               
               

               Alignm length:
               562
               

               Alignm identity:
               396
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 33
               

               Conread position:
               10-456
               

               Cow position:
               
               

               Alignm length:
               456
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 31
               

               Conread position:
               12-450
               

               Cow position:
               
               

               Alignm length:
               443
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 139
               

               Conread position:
               17-367
               

               Cow position:
               
               

               Alignm length:
               354
               

               Alignm identity:
               233
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               60, 25
               

               Conread position:
               17-456
               

               Cow position:
               
               

               Alignm length:
               445
               

               Alignm identity:
               305
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 28
               

               Conread position:
               17-456
               

               Cow position:
               
               

               Alignm length:
               445
               

               Alignm identity:
               316
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 26
               

               Conread position:
               19-428
               

               Cow position:
               
               

               Alignm length:
               414
               

               Alignm identity:
               281
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               48, 22
               

               Conread position:
               19-456
               

               Cow position:
               
               

               Alignm length:
               447
               

               Alignm identity:
               316
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 22
               

               Conread position:
               27-595
               

               Cow position:
               
               

               Alignm length:
               578
               

               Alignm identity:
               410
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 14
               

               Conread position:
               30-389
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               252
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               9, 107
               

               Conread position:
               30-456
               

               Cow position:
               
               

               Alignm length:
               437
               

               Alignm identity:
               310
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 83
               

               Conread position:
               63-456
               

               Cow position:
               
               

               Alignm length:
               400
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               226, 87
               

               Conread position:
               98-456
               

               Cow position:
               
               

               Alignm length:
               362
               

               Alignm identity:
               244
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               41, 34
               

               Conread position:
               114-456
               

               Cow position:
               
               

               Alignm length:
               348
               

               Alignm identity:
               233
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               180, 36
               

               Conread position:
               141-394
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               177
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               197, 60
               

               Conread position:
               153-456
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               186
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               68, 88
               

               Conread position:
               186-456
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               195
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               23, 133
               

               Conread position:
               191-456
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               196
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               6, 57
               

               Conread position:
               207-396
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               18, 129
               

               Conread position:
               225-456
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               169
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               70, 185
               

               Conread position:
               232-456
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               159, 92
               

               Conread position:
               233-456
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               51, 0
               
Show alignments to all cow chromosomes.