Cow genome map
| Conread name: | Liv1-LVRM10127A01 |
| Conread position: | 1-337 |
| Cow position: | chr20:32349401-32349723 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 238 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 64, 40 |
| Conread position: | 1-386 |
| Cow position: | chr20:9344101-9344463 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 40 |
| Conread position: | 1-423 |
| Cow position: | chr20:27338343-27338744 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 290 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 64, 33 |
| Conread position: | 1-425 |
| Cow position: | chr20:19355900-19356310 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 40 |
| Conread position: | 1-428 |
| Cow position: | chr20:9521000-9520587 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 68 |
| Conread position: | 1-452 |
| Cow position: | chr20:13764038-13764468 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 279, 33 |
| Conread position: | 1-452 |
| Cow position: | chr20:21915764-21916210 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 44 |
| Conread position: | 1-452 |
| Cow position: | chr20:29949651-29950098 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 44 |
| Conread position: | 1-456 |
| Cow position: | chr20:5536070-5536521 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 44 |
| Conread position: | 1-456 |
| Cow position: | chr20:12569655-12570080 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 33 |
| Conread position: | 1-456 |
| Cow position: | chr20:17660612-17660168 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 152 |
| Conread position: | 1-456 |
| Cow position: | chr20:23468529-23468089 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 20 |
| Conread position: | 1-456 |
| Cow position: | chr20:25849688-25849252 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 33 |
| Conread position: | 1-456 |
| Cow position: | chr20:27870337-27870785 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 44 |
| Conread position: | 1-456 |
| Cow position: | chr20:30686706-30687153 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 44 |
| Conread position: | 1-594 |
| Cow position: | chr20:16178633-16178054 (view UCSC Genome Browser custom track) |
| Alignm length: | 605 |
| Alignm identity: | 411 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 47 |
| Conread position: | 2-456 |
| Cow position: | chr20:13499246-13499684 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 16 |
| Conread position: | 6-456 |
| Cow position: | chr20:21395070-21395493 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 303 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 281, 34 |
| Conread position: | 7-371 |
| Cow position: | chr20:2009283-2008922 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 239 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 66, 34 |
| Conread position: | 7-456 |
| Cow position: | chr20:28161962-28162402 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 190, 58 |
| Conread position: | 8-456 |
| Cow position: | chr20:30429411-30429849 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 33 |
| Conread position: | 9-357 |
| Cow position: | chr20:13678906-13678566 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 142 |
| Conread position: | 11-456 |
| Cow position: | chr20:19439058-19439493 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 24 |
| Conread position: | 17-383 |
| Cow position: | chr20:22210199-22210541 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 258 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 358, 26 |
| Conread position: | 23-531 |
| Cow position: | chr20:20753631-20753157 (view UCSC Genome Browser custom track) |
| Alignm length: | 512 |
| Alignm identity: | 337 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 15, 44 |
| Conread position: | 28-451 |
| Cow position: | chr20:15293150-15293553 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 17 |
| Conread position: | 28-456 |
| Cow position: | chr20:15066630-15067029 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 289 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 309, 61 |
| Conread position: | 36-456 |
| Cow position: | chr20:18967667-18968066 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 296 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 48, 54 |
| Conread position: | 47-360 |
| Cow position: | chr20:13663876-13663566 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 228 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 15, 113 |
| Conread position: | 47-456 |
| Cow position: | chr20:9546850-9547224 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 279 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 328, 24 |
| Conread position: | 52-464 |
| Cow position: | chr20:27896842-27896462 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 273 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 379, 9 |
| Conread position: | 62-423 |
| Cow position: | chr20:871813-871460 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 249 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 218, 90 |
| Conread position: | 62-449 |
| Cow position: | chr20:32120529-32120908 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 267 |
| Alignm E-value: | 8.00141e-43 |
| Alignm gaps (pig, cow): | 218, 88 |
| Conread position: | 80-430 |
| Cow position: | chr20:19340852-19341182 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 246 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 295, 52 |
| Conread position: | 101-456 |
| Cow position: | chr20:24615658-24615328 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 248 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 38, 31 |
| Conread position: | 135-438 |
| Cow position: | chr20:33182872-33182593 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 221 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 153, 15 |
| Conread position: | 186-398 |
| Cow position: | chr20:22698302-22698510 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 159 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 34, 14 |
| Conread position: | 186-456 |
| Cow position: | chr20:12437116-12436843 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 189 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 43, 16 |
| Conread position: | 194-420 |
| Cow position: | chr20:18323638-18323417 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 174 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 194-456 |
| Cow position: | chr20:26054390-26054113 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 189 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 11, 213 |
| Conread position: | 208-456 |
| Cow position: | chr20:18314033-18313795 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 78, 89 |
| Conread position: | 231-456 |
| Cow position: | chr20:8972827-8972600 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 158 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 25, 160 |
Show alignments to all cow chromosomes.