Cow genome map
| Conread name: | Liv1-LVRM10127A01 |
| Conread position: | 1-339 |
| Cow position: | chr25:32988135-32987807 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 226 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 65, 40 |
| Conread position: | 1-369 |
| Cow position: | chr25:18273647-18273291 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 33 |
| Conread position: | 1-397 |
| Cow position: | chr25:30266616-30267003 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 34 |
| Conread position: | 1-428 |
| Cow position: | chr25:14957328-14956923 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 40 |
| Conread position: | 1-445 |
| Cow position: | chr25:13454458-13454038 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 307, 25 |
| Conread position: | 1-456 |
| Cow position: | chr25:12941551-12941105 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 44 |
| Conread position: | 1-456 |
| Cow position: | chr25:17655561-17655989 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 33 |
| Conread position: | 1-456 |
| Cow position: | chr25:18305270-18305705 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 306 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 66, 92 |
| Conread position: | 1-456 |
| Cow position: | chr25:18888621-18888178 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 153 |
| Conread position: | 1-456 |
| Cow position: | chr25:22148662-22149107 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 259, 25 |
| Conread position: | 1-456 |
| Cow position: | chr25:34345882-34345432 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 50 |
| Conread position: | 1-459 |
| Cow position: | chr25:11041488-11041918 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 33 |
| Conread position: | 1-460 |
| Cow position: | chr25:17588435-17587997 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 40 |
| Conread position: | 4-425 |
| Cow position: | chr25:11931654-11931257 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 371, 37 |
| Conread position: | 4-456 |
| Cow position: | chr25:18450444-18450900 (view UCSC Genome Browser custom track) |
| Alignm length: | 478 |
| Alignm identity: | 322 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 70, 37 |
| Conread position: | 6-387 |
| Cow position: | chr25:24659086-24658715 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 28 |
| Conread position: | 6-456 |
| Cow position: | chr25:20630755-20631190 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 39 |
| Conread position: | 8-362 |
| Cow position: | chr25:3974165-3974503 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 234 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 59, 14 |
| Conread position: | 8-456 |
| Cow position: | chr25:18192633-18192191 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 26 |
| Conread position: | 8-458 |
| Cow position: | chr25:27021457-27021028 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 39 |
| Conread position: | 14-452 |
| Cow position: | chr25:20774236-20773809 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 20 |
| Conread position: | 17-455 |
| Cow position: | chr25:13782172-13782612 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 28 |
| Conread position: | 17-456 |
| Cow position: | chr25:17559423-17558999 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 17 |
| Conread position: | 21-433 |
| Cow position: | chr25:19921680-19922087 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 160, 24 |
| Conread position: | 30-456 |
| Cow position: | chr25:13693519-13693102 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 103 |
| Conread position: | 32-427 |
| Cow position: | chr25:18486395-18486028 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 285 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 9, 26 |
| Conread position: | 52-454 |
| Cow position: | chr25:18251741-18251368 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 265 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 12, 62 |
| Conread position: | 59-456 |
| Cow position: | chr25:21902217-21902603 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 269 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 237, 91 |
| Conread position: | 69-456 |
| Cow position: | chr25:13062520-13062144 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 110, 81 |
| Conread position: | 88-317 |
| Cow position: | chr25:30131754-30131538 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 162 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 91, 61 |
| Conread position: | 135-576 |
| Cow position: | chr25:9392891-9393299 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 18 |
| Conread position: | 147-432 |
| Cow position: | chr25:25543185-25543456 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 198 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 212, 37 |
| Conread position: | 201-452 |
| Cow position: | chr25:13999067-13999329 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 190 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 7, 209 |
| Conread position: | 202-452 |
| Cow position: | chr25:19339289-19339037 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 182 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 23, 62 |
| Conread position: | 205-383 |
| Cow position: | chr25:27523293-27523114 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 84, 55 |
| Conread position: | 210-390 |
| Cow position: | chr25:30149392-30149210 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 230-456 |
| Cow position: | chr25:20346642-20346417 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 15, 41 |
| Conread position: | 270-529 |
| Cow position: | chr25:33614226-33614486 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 24, 135 |
Show alignments to all cow chromosomes.