Cow genome map
| Conread name: | Liv1-LVRM10127A01 |
| Conread position: | 1-320 |
| Cow position: | chr27:28892672-28892981 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 222 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 65, 40 |
| Conread position: | 1-387 |
| Cow position: | chr27:11486390-11486750 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 305, 66 |
| Conread position: | 1-390 |
| Cow position: | chr27:25332010-25331644 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 25 |
| Conread position: | 1-455 |
| Cow position: | chr27:15274987-15274549 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 40 |
| Conread position: | 1-456 |
| Cow position: | chr27:1210432-1210875 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 288, 44 |
| Conread position: | 1-456 |
| Cow position: | chr27:9330811-9331253 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 138, 44 |
| Conread position: | 1-456 |
| Cow position: | chr27:9992123-9991694 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 33 |
| Conread position: | 1-456 |
| Cow position: | chr27:13898398-13898831 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 46 |
| Conread position: | 1-456 |
| Cow position: | chr27:26326150-26326580 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 96 |
| Conread position: | 1-456 |
| Cow position: | chr27:27664077-27664514 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 40 |
| Conread position: | 2-371 |
| Cow position: | chr27:23292357-23292698 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 263 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 35, 66 |
| Conread position: | 3-426 |
| Cow position: | chr27:7792756-7792363 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 276 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 373, 55 |
| Conread position: | 4-390 |
| Cow position: | chr27:22034342-22034715 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 37 |
| Conread position: | 6-456 |
| Cow position: | chr27:4980454-4980891 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 283, 39 |
| Conread position: | 7-456 |
| Cow position: | chr27:3234453-3234003 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 38 |
| Conread position: | 17-403 |
| Cow position: | chr27:21335031-21335395 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 247 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 59, 12 |
| Conread position: | 17-459 |
| Cow position: | chr27:1677490-1677049 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 24 |
| Conread position: | 20-420 |
| Cow position: | chr27:16425824-16426206 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 281 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 43, 32 |
| Conread position: | 47-456 |
| Cow position: | chr27:19259818-19260217 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 104 |
| Conread position: | 52-446 |
| Cow position: | chr27:1575724-1576108 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 255 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 16, 76 |
| Conread position: | 54-456 |
| Cow position: | chr27:16033277-16032884 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 97 |
| Conread position: | 59-402 |
| Cow position: | chr27:25084712-25085036 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 249 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 8, 92 |
| Conread position: | 78-357 |
| Cow position: | chr27:16552021-16552287 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 202 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 258, 72 |
| Conread position: | 143-452 |
| Cow position: | chr27:12748245-12748551 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 223 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 146, 59 |
| Conread position: | 175-452 |
| Cow position: | chr27:22150180-22150460 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 191 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 42, 27 |
| Conread position: | 194-456 |
| Cow position: | chr27:798316-798048 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 187 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 11, 221 |
| Conread position: | 203-397 |
| Cow position: | chr27:8589987-8590178 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 150 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 100, 73 |
| Conread position: | 229-456 |
| Cow position: | chr27:19524845-19525072 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 60, 180 |
| Conread position: | 232-456 |
| Cow position: | chr27:167632-167409 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 62, 172 |
| Conread position: | 271-462 |
| Cow position: | chr27:21286210-21286027 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 138 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 76, 19 |
| Conread position: | 279-456 |
| Cow position: | chr27:8199151-8199327 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 129, 0 |
| Conread position: | 298-456 |
| Cow position: | chr27:29056522-29056679 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 123 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 77, 105 |
Show alignments to all cow chromosomes.