Cow genome map
Conread name: | Liv1-LVRM10127A01 |
Conread position: | 1-371 |
Cow position: | chr28:10496409-10496064 (view UCSC Genome Browser custom track) |
Alignm length: | 373 |
Alignm identity: | 270 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 66, 25 |
Conread position: | 1-397 |
Cow position: | chr28:10460484-10460102 (view UCSC Genome Browser custom track) |
Alignm length: | 400 |
Alignm identity: | 268 |
Alignm E-value: | 1e-39 |
Alignm gaps (pig, cow): | 63, 27 |
Conread position: | 1-428 |
Cow position: | chr28:10646299-10645897 (view UCSC Genome Browser custom track) |
Alignm length: | 431 |
Alignm identity: | 291 |
Alignm E-value: | 5e-40 |
Alignm gaps (pig, cow): | 123, 40 |
Conread position: | 1-456 |
Cow position: | chr28:783779-784220 (view UCSC Genome Browser custom track) |
Alignm length: | 459 |
Alignm identity: | 323 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 64, 44 |
Conread position: | 1-456 |
Cow position: | chr28:1386274-1385846 (view UCSC Genome Browser custom track) |
Alignm length: | 459 |
Alignm identity: | 329 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 63, 19 |
Conread position: | 1-456 |
Cow position: | chr28:5750585-5750140 (view UCSC Genome Browser custom track) |
Alignm length: | 460 |
Alignm identity: | 323 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 66, 44 |
Conread position: | 1-456 |
Cow position: | chr28:5799418-5799855 (view UCSC Genome Browser custom track) |
Alignm length: | 459 |
Alignm identity: | 322 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 288, 33 |
Conread position: | 1-456 |
Cow position: | chr28:5938609-5939051 (view UCSC Genome Browser custom track) |
Alignm length: | 459 |
Alignm identity: | 327 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 288, 33 |
Conread position: | 1-456 |
Cow position: | chr28:6778820-6778378 (view UCSC Genome Browser custom track) |
Alignm length: | 460 |
Alignm identity: | 309 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 67, 107 |
Conread position: | 1-456 |
Cow position: | chr28:14704265-14703820 (view UCSC Genome Browser custom track) |
Alignm length: | 465 |
Alignm identity: | 337 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 66, 33 |
Conread position: | 1-456 |
Cow position: | chr28:17389523-17389964 (view UCSC Genome Browser custom track) |
Alignm length: | 462 |
Alignm identity: | 331 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 66, 33 |
Conread position: | 1-456 |
Cow position: | chr28:17666184-17665744 (view UCSC Genome Browser custom track) |
Alignm length: | 459 |
Alignm identity: | 325 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 66, 33 |
Conread position: | 1-456 |
Cow position: | chr28:22260029-22259591 (view UCSC Genome Browser custom track) |
Alignm length: | 459 |
Alignm identity: | 332 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 66, 33 |
Conread position: | 1-456 |
Cow position: | chr28:29821118-29821554 (view UCSC Genome Browser custom track) |
Alignm length: | 460 |
Alignm identity: | 321 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 66, 44 |
Conread position: | 1-456 |
Cow position: | chr28:32791256-32790831 (view UCSC Genome Browser custom track) |
Alignm length: | 460 |
Alignm identity: | 327 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 65, 33 |
Conread position: | 1-484 |
Cow position: | chr28:8719823-8719366 (view UCSC Genome Browser custom track) |
Alignm length: | 496 |
Alignm identity: | 334 |
Alignm E-value: | 1e-37 |
Alignm gaps (pig, cow): | 138, 42 |
Conread position: | 2-371 |
Cow position: | chr28:21566583-21566937 (view UCSC Genome Browser custom track) |
Alignm length: | 375 |
Alignm identity: | 262 |
Alignm E-value: | 1.96182e-44 |
Alignm gaps (pig, cow): | 55, 39 |
Conread position: | 2-456 |
Cow position: | chr28:18146611-18146177 (view UCSC Genome Browser custom track) |
Alignm length: | 459 |
Alignm identity: | 314 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 62, 7 |
Conread position: | 3-397 |
Cow position: | chr28:21360620-21361006 (view UCSC Genome Browser custom track) |
Alignm length: | 410 |
Alignm identity: | 288 |
Alignm E-value: | 6.00036e-42 |
Alignm gaps (pig, cow): | 34, 51 |
Conread position: | 3-432 |
Cow position: | chr28:15587212-15587611 (view UCSC Genome Browser custom track) |
Alignm length: | 431 |
Alignm identity: | 306 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 61, 38 |
Conread position: | 3-456 |
Cow position: | chr28:1505991-1506429 (view UCSC Genome Browser custom track) |
Alignm length: | 456 |
Alignm identity: | 325 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 64, 42 |
Conread position: | 6-380 |
Cow position: | chr28:14232804-14232432 (view UCSC Genome Browser custom track) |
Alignm length: | 387 |
Alignm identity: | 271 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 79, 28 |
Conread position: | 6-452 |
Cow position: | chr28:12409107-12408666 (view UCSC Genome Browser custom track) |
Alignm length: | 449 |
Alignm identity: | 310 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 208, 39 |
Conread position: | 6-456 |
Cow position: | chr28:1166752-1166331 (view UCSC Genome Browser custom track) |
Alignm length: | 454 |
Alignm identity: | 317 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 61, 44 |
Conread position: | 6-456 |
Cow position: | chr28:2085586-2086028 (view UCSC Genome Browser custom track) |
Alignm length: | 455 |
Alignm identity: | 315 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 61, 39 |
Conread position: | 7-452 |
Cow position: | chr28:18519320-18518888 (view UCSC Genome Browser custom track) |
Alignm length: | 452 |
Alignm identity: | 330 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 273, 38 |
Conread position: | 7-456 |
Cow position: | chr28:3191127-3190689 (view UCSC Genome Browser custom track) |
Alignm length: | 453 |
Alignm identity: | 319 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 60, 27 |
Conread position: | 8-437 |
Cow position: | chr28:7827116-7827529 (view UCSC Genome Browser custom track) |
Alignm length: | 435 |
Alignm identity: | 303 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 59, 33 |
Conread position: | 8-456 |
Cow position: | chr28:1954483-1954918 (view UCSC Genome Browser custom track) |
Alignm length: | 452 |
Alignm identity: | 310 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 59, 33 |
Conread position: | 8-456 |
Cow position: | chr28:24589986-24590420 (view UCSC Genome Browser custom track) |
Alignm length: | 456 |
Alignm identity: | 312 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 59, 26 |
Conread position: | 12-452 |
Cow position: | chr28:7003129-7003555 (view UCSC Genome Browser custom track) |
Alignm length: | 447 |
Alignm identity: | 321 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 55, 84 |
Conread position: | 12-456 |
Cow position: | chr28:7741575-7741995 (view UCSC Genome Browser custom track) |
Alignm length: | 447 |
Alignm identity: | 316 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 55, 33 |
Conread position: | 14-456 |
Cow position: | chr28:484460-484031 (view UCSC Genome Browser custom track) |
Alignm length: | 451 |
Alignm identity: | 322 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 20 |
Conread position: | 17-455 |
Cow position: | chr28:22042149-22041723 (view UCSC Genome Browser custom track) |
Alignm length: | 446 |
Alignm identity: | 306 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 50, 24 |
Conread position: | 17-456 |
Cow position: | chr28:12151445-12151888 (view UCSC Genome Browser custom track) |
Alignm length: | 453 |
Alignm identity: | 323 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 50, 28 |
Conread position: | 19-383 |
Cow position: | chr28:4575325-4574978 (view UCSC Genome Browser custom track) |
Alignm length: | 366 |
Alignm identity: | 236 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 57, 15 |
Conread position: | 27-397 |
Cow position: | chr28:15241537-15241172 (view UCSC Genome Browser custom track) |
Alignm length: | 382 |
Alignm identity: | 253 |
Alignm E-value: | 4e-28 |
Alignm gaps (pig, cow): | 27, 17 |
Conread position: | 28-456 |
Cow position: | chr28:15034974-15034548 (view UCSC Genome Browser custom track) |
Alignm length: | 433 |
Alignm identity: | 297 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 39, 17 |
Conread position: | 30-456 |
Cow position: | chr28:33253462-33253877 (view UCSC Genome Browser custom track) |
Alignm length: | 433 |
Alignm identity: | 306 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 259, 29 |
Conread position: | 33-398 |
Cow position: | chr28:12648529-12648166 (view UCSC Genome Browser custom track) |
Alignm length: | 375 |
Alignm identity: | 265 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 76, 41 |
Conread position: | 63-383 |
Cow position: | chr28:19946523-19946218 (view UCSC Genome Browser custom track) |
Alignm length: | 325 |
Alignm identity: | 217 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 217, 39 |
Conread position: | 79-456 |
Cow position: | chr28:5112943-5112561 (view UCSC Genome Browser custom track) |
Alignm length: | 385 |
Alignm identity: | 265 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 118, 71 |
Conread position: | 82-456 |
Cow position: | chr28:1216633-1216272 (view UCSC Genome Browser custom track) |
Alignm length: | 377 |
Alignm identity: | 259 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 151, 52 |
Conread position: | 111-594 |
Cow position: | chr28:2117210-2117674 (view UCSC Genome Browser custom track) |
Alignm length: | 493 |
Alignm identity: | 320 |
Alignm E-value: | 2e-34 |
Alignm gaps (pig, cow): | 31, 23 |
Conread position: | 116-456 |
Cow position: | chr28:10580644-10580311 (view UCSC Genome Browser custom track) |
Alignm length: | 341 |
Alignm identity: | 227 |
Alignm E-value: | 4e-39 |
Alignm gaps (pig, cow): | 34, 0 |
Conread position: | 123-464 |
Cow position: | chr28:13604001-13604330 (view UCSC Genome Browser custom track) |
Alignm length: | 347 |
Alignm identity: | 256 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 166, 27 |
Conread position: | 194-456 |
Cow position: | chr28:1459390-1459658 (view UCSC Genome Browser custom track) |
Alignm length: | 274 |
Alignm identity: | 195 |
Alignm E-value: | 7e-33 |
Alignm gaps (pig, cow): | 11, 216 |
Conread position: | 194-456 |
Cow position: | chr28:6537515-6537247 (view UCSC Genome Browser custom track) |
Alignm length: | 274 |
Alignm identity: | 195 |
Alignm E-value: | 2e-33 |
Alignm gaps (pig, cow): | 11, 216 |
Conread position: | 202-456 |
Cow position: | chr28:8784629-8784873 (view UCSC Genome Browser custom track) |
Alignm length: | 263 |
Alignm identity: | 193 |
Alignm E-value: | 2e-32 |
Alignm gaps (pig, cow): | 18, 134 |
Conread position: | 205-456 |
Cow position: | chr28:6786574-6786818 (view UCSC Genome Browser custom track) |
Alignm length: | 252 |
Alignm identity: | 169 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 75, 0 |
Conread position: | 205-456 |
Cow position: | chr28:10470978-10471221 (view UCSC Genome Browser custom track) |
Alignm length: | 253 |
Alignm identity: | 179 |
Alignm E-value: | 2e-33 |
Alignm gaps (pig, cow): | 84, 32 |
Conread position: | 211-456 |
Cow position: | chr28:34595549-34595795 (view UCSC Genome Browser custom track) |
Alignm length: | 250 |
Alignm identity: | 176 |
Alignm E-value: | 7e-33 |
Alignm gaps (pig, cow): | 78, 194 |
Conread position: | 212-463 |
Cow position: | chr28:5803347-5803589 (view UCSC Genome Browser custom track) |
Alignm length: | 253 |
Alignm identity: | 177 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 16, 73 |
Conread position: | 214-456 |
Cow position: | chr28:14752106-14752348 (view UCSC Genome Browser custom track) |
Alignm length: | 249 |
Alignm identity: | 171 |
Alignm E-value: | 3e-26 |
Alignm gaps (pig, cow): | 81, 97 |
Conread position: | 220-456 |
Cow position: | chr28:8380365-8380600 (view UCSC Genome Browser custom track) |
Alignm length: | 238 |
Alignm identity: | 161 |
Alignm E-value: | 4e-28 |
Alignm gaps (pig, cow): | 69, 17 |
Conread position: | 228-456 |
Cow position: | chr28:33637876-33638107 (view UCSC Genome Browser custom track) |
Alignm length: | 232 |
Alignm identity: | 159 |
Alignm E-value: | 4e-29 |
Alignm gaps (pig, cow): | 61, 0 |
Conread position: | 271-456 |
Cow position: | chr28:1813552-1813370 (view UCSC Genome Browser custom track) |
Alignm length: | 188 |
Alignm identity: | 139 |
Alignm E-value: | 1e-28 |
Alignm gaps (pig, cow): | 18, 135 |
Show alignments to all cow chromosomes.