Cow genome map


           Conread name:
           Liv1-LVRM10127A01
        

               Conread position:
               1-371
               

               Cow position:
               
               

               Alignm length:
               373
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 25
               

               Conread position:
               1-397
               

               Cow position:
               
               

               Alignm length:
               400
               

               Alignm identity:
               268
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               63, 27
               

               Conread position:
               1-428
               

               Cow position:
               
               

               Alignm length:
               431
               

               Alignm identity:
               291
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               123, 40
               

               Conread position:
               1-456
               

               Cow position:
               
               

               Alignm length:
               459
               

               Alignm identity:
               323
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 44
               

               Conread position:
               1-456
               

               Cow position:
               
               

               Alignm length:
               459
               

               Alignm identity:
               329
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 19
               

               Conread position:
               1-456
               

               Cow position:
               
               

               Alignm length:
               460
               

               Alignm identity:
               323
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 44
               

               Conread position:
               1-456
               

               Cow position:
               
               

               Alignm length:
               459
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               288, 33
               

               Conread position:
               1-456
               

               Cow position:
               
               

               Alignm length:
               459
               

               Alignm identity:
               327
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               288, 33
               

               Conread position:
               1-456
               

               Cow position:
               
               

               Alignm length:
               460
               

               Alignm identity:
               309
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 107
               

               Conread position:
               1-456
               

               Cow position:
               
               

               Alignm length:
               465
               

               Alignm identity:
               337
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 33
               

               Conread position:
               1-456
               

               Cow position:
               
               

               Alignm length:
               462
               

               Alignm identity:
               331
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 33
               

               Conread position:
               1-456
               

               Cow position:
               
               

               Alignm length:
               459
               

               Alignm identity:
               325
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 33
               

               Conread position:
               1-456
               

               Cow position:
               
               

               Alignm length:
               459
               

               Alignm identity:
               332
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 33
               

               Conread position:
               1-456
               

               Cow position:
               
               

               Alignm length:
               460
               

               Alignm identity:
               321
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 44
               

               Conread position:
               1-456
               

               Cow position:
               
               

               Alignm length:
               460
               

               Alignm identity:
               327
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 33
               

               Conread position:
               1-484
               

               Cow position:
               
               

               Alignm length:
               496
               

               Alignm identity:
               334
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               138, 42
               

               Conread position:
               2-371
               

               Cow position:
               
               

               Alignm length:
               375
               

               Alignm identity:
               262
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               55, 39
               

               Conread position:
               2-456
               

               Cow position:
               
               

               Alignm length:
               459
               

               Alignm identity:
               314
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 7
               

               Conread position:
               3-397
               

               Cow position:
               
               

               Alignm length:
               410
               

               Alignm identity:
               288
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               34, 51
               

               Conread position:
               3-432
               

               Cow position:
               
               

               Alignm length:
               431
               

               Alignm identity:
               306
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 38
               

               Conread position:
               3-456
               

               Cow position:
               
               

               Alignm length:
               456
               

               Alignm identity:
               325
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 42
               

               Conread position:
               6-380
               

               Cow position:
               
               

               Alignm length:
               387
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 28
               

               Conread position:
               6-452
               

               Cow position:
               
               

               Alignm length:
               449
               

               Alignm identity:
               310
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               208, 39
               

               Conread position:
               6-456
               

               Cow position:
               
               

               Alignm length:
               454
               

               Alignm identity:
               317
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 44
               

               Conread position:
               6-456
               

               Cow position:
               
               

               Alignm length:
               455
               

               Alignm identity:
               315
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 39
               

               Conread position:
               7-452
               

               Cow position:
               
               

               Alignm length:
               452
               

               Alignm identity:
               330
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               273, 38
               

               Conread position:
               7-456
               

               Cow position:
               
               

               Alignm length:
               453
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 27
               

               Conread position:
               8-437
               

               Cow position:
               
               

               Alignm length:
               435
               

               Alignm identity:
               303
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 33
               

               Conread position:
               8-456
               

               Cow position:
               
               

               Alignm length:
               452
               

               Alignm identity:
               310
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 33
               

               Conread position:
               8-456
               

               Cow position:
               
               

               Alignm length:
               456
               

               Alignm identity:
               312
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 26
               

               Conread position:
               12-452
               

               Cow position:
               
               

               Alignm length:
               447
               

               Alignm identity:
               321
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 84
               

               Conread position:
               12-456
               

               Cow position:
               
               

               Alignm length:
               447
               

               Alignm identity:
               316
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 33
               

               Conread position:
               14-456
               

               Cow position:
               
               

               Alignm length:
               451
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 20
               

               Conread position:
               17-455
               

               Cow position:
               
               

               Alignm length:
               446
               

               Alignm identity:
               306
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 24
               

               Conread position:
               17-456
               

               Cow position:
               
               

               Alignm length:
               453
               

               Alignm identity:
               323
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 28
               

               Conread position:
               19-383
               

               Cow position:
               
               

               Alignm length:
               366
               

               Alignm identity:
               236
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               57, 15
               

               Conread position:
               27-397
               

               Cow position:
               
               

               Alignm length:
               382
               

               Alignm identity:
               253
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               27, 17
               

               Conread position:
               28-456
               

               Cow position:
               
               

               Alignm length:
               433
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 17
               

               Conread position:
               30-456
               

               Cow position:
               
               

               Alignm length:
               433
               

               Alignm identity:
               306
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               259, 29
               

               Conread position:
               33-398
               

               Cow position:
               
               

               Alignm length:
               375
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 41
               

               Conread position:
               63-383
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               217
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               217, 39
               

               Conread position:
               79-456
               

               Cow position:
               
               

               Alignm length:
               385
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               118, 71
               

               Conread position:
               82-456
               

               Cow position:
               
               

               Alignm length:
               377
               

               Alignm identity:
               259
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               151, 52
               

               Conread position:
               111-594
               

               Cow position:
               
               

               Alignm length:
               493
               

               Alignm identity:
               320
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               31, 23
               

               Conread position:
               116-456
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               227
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               123-464
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               166, 27
               

               Conread position:
               194-456
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               195
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               11, 216
               

               Conread position:
               194-456
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               195
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               11, 216
               

               Conread position:
               202-456
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               193
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               18, 134
               

               Conread position:
               205-456
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               205-456
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               84, 32
               

               Conread position:
               211-456
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               176
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               78, 194
               

               Conread position:
               212-463
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               16, 73
               

               Conread position:
               214-456
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               171
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               81, 97
               

               Conread position:
               220-456
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               161
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               69, 17
               

               Conread position:
               228-456
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               159
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               271-456
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               18, 135
               
Show alignments to all cow chromosomes.