Cow genome map

Conread name: Liv1-LVRM10127A01

Conread position: 1-371
Cow position: chr28:10496409-10496064 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 25

Conread position: 1-397
Cow position: chr28:10460484-10460102 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 268
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 63, 27

Conread position: 1-428
Cow position: chr28:10646299-10645897 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 291
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 123, 40

Conread position: 1-456
Cow position: chr28:783779-784220 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 44

Conread position: 1-456
Cow position: chr28:1386274-1385846 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 19

Conread position: 1-456
Cow position: chr28:5750585-5750140 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 44

Conread position: 1-456
Cow position: chr28:5799418-5799855 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 288, 33

Conread position: 1-456
Cow position: chr28:5938609-5939051 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 288, 33

Conread position: 1-456
Cow position: chr28:6778820-6778378 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 107

Conread position: 1-456
Cow position: chr28:14704265-14703820 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 33

Conread position: 1-456
Cow position: chr28:17389523-17389964 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 33

Conread position: 1-456
Cow position: chr28:17666184-17665744 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 33

Conread position: 1-456
Cow position: chr28:22260029-22259591 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 33

Conread position: 1-456
Cow position: chr28:29821118-29821554 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 44

Conread position: 1-456
Cow position: chr28:32791256-32790831 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 33

Conread position: 1-484
Cow position: chr28:8719823-8719366 (view UCSC Genome Browser custom track)
Alignm length: 496
Alignm identity: 334
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 138, 42

Conread position: 2-371
Cow position: chr28:21566583-21566937 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 262
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 55, 39

Conread position: 2-456
Cow position: chr28:18146611-18146177 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 7

Conread position: 3-397
Cow position: chr28:21360620-21361006 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 288
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 34, 51

Conread position: 3-432
Cow position: chr28:15587212-15587611 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 38

Conread position: 3-456
Cow position: chr28:1505991-1506429 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 42

Conread position: 6-380
Cow position: chr28:14232804-14232432 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 28

Conread position: 6-452
Cow position: chr28:12409107-12408666 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 208, 39

Conread position: 6-456
Cow position: chr28:1166752-1166331 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 44

Conread position: 6-456
Cow position: chr28:2085586-2086028 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 39

Conread position: 7-452
Cow position: chr28:18519320-18518888 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 273, 38

Conread position: 7-456
Cow position: chr28:3191127-3190689 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 27

Conread position: 8-437
Cow position: chr28:7827116-7827529 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 33

Conread position: 8-456
Cow position: chr28:1954483-1954918 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 33

Conread position: 8-456
Cow position: chr28:24589986-24590420 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 26

Conread position: 12-452
Cow position: chr28:7003129-7003555 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 84

Conread position: 12-456
Cow position: chr28:7741575-7741995 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 33

Conread position: 14-456
Cow position: chr28:484460-484031 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 20

Conread position: 17-455
Cow position: chr28:22042149-22041723 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 24

Conread position: 17-456
Cow position: chr28:12151445-12151888 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 28

Conread position: 19-383
Cow position: chr28:4575325-4574978 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 236
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 57, 15

Conread position: 27-397
Cow position: chr28:15241537-15241172 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 253
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 27, 17

Conread position: 28-456
Cow position: chr28:15034974-15034548 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 17

Conread position: 30-456
Cow position: chr28:33253462-33253877 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 259, 29

Conread position: 33-398
Cow position: chr28:12648529-12648166 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 41

Conread position: 63-383
Cow position: chr28:19946523-19946218 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 217
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 217, 39

Conread position: 79-456
Cow position: chr28:5112943-5112561 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 71

Conread position: 82-456
Cow position: chr28:1216633-1216272 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 259
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 151, 52

Conread position: 111-594
Cow position: chr28:2117210-2117674 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 320
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 31, 23

Conread position: 116-456
Cow position: chr28:10580644-10580311 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 227
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 34, 0

Conread position: 123-464
Cow position: chr28:13604001-13604330 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 27

Conread position: 194-456
Cow position: chr28:1459390-1459658 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 195
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 11, 216

Conread position: 194-456
Cow position: chr28:6537515-6537247 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 195
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 11, 216

Conread position: 202-456
Cow position: chr28:8784629-8784873 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 193
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 18, 134

Conread position: 205-456
Cow position: chr28:6786574-6786818 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 169
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 75, 0

Conread position: 205-456
Cow position: chr28:10470978-10471221 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 179
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 84, 32

Conread position: 211-456
Cow position: chr28:34595549-34595795 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 176
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 78, 194

Conread position: 212-463
Cow position: chr28:5803347-5803589 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 177
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 16, 73

Conread position: 214-456
Cow position: chr28:14752106-14752348 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 171
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 81, 97

Conread position: 220-456
Cow position: chr28:8380365-8380600 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 161
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 69, 17

Conread position: 228-456
Cow position: chr28:33637876-33638107 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 159
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 61, 0

Conread position: 271-456
Cow position: chr28:1813552-1813370 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 139
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 18, 135

Show alignments to all cow chromosomes.