Cow genome map


           Conread name:
           Liv1-LVRM10127A01
        

               Conread position:
               1-310
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               222
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               66, 44
               

               Conread position:
               1-321
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               211
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               302, 40
               

               Conread position:
               1-337
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               229
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               67, 40
               

               Conread position:
               1-447
               

               Cow position:
               
               

               Alignm length:
               452
               

               Alignm identity:
               312
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 44
               

               Conread position:
               1-456
               

               Cow position:
               
               

               Alignm length:
               459
               

               Alignm identity:
               310
               

               Alignm E-value:
               8.96831e-44
               

               Alignm gaps (pig, cow):
               66, 44
               

               Conread position:
               1-456
               

               Cow position:
               
               

               Alignm length:
               463
               

               Alignm identity:
               326
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 40
               

               Conread position:
               1-456
               

               Cow position:
               
               

               Alignm length:
               458
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               279, 33
               

               Conread position:
               1-456
               

               Cow position:
               
               

               Alignm length:
               463
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 40
               

               Conread position:
               1-456
               

               Cow position:
               
               

               Alignm length:
               461
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 40
               

               Conread position:
               1-456
               

               Cow position:
               
               

               Alignm length:
               461
               

               Alignm identity:
               326
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 44
               

               Conread position:
               1-456
               

               Cow position:
               
               

               Alignm length:
               457
               

               Alignm identity:
               323
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 46
               

               Conread position:
               1-456
               

               Cow position:
               
               

               Alignm length:
               461
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 33
               

               Conread position:
               1-456
               

               Cow position:
               
               

               Alignm length:
               460
               

               Alignm identity:
               328
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               279, 44
               

               Conread position:
               1-456
               

               Cow position:
               
               

               Alignm length:
               459
               

               Alignm identity:
               316
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 33
               

               Conread position:
               1-456
               

               Cow position:
               
               

               Alignm length:
               459
               

               Alignm identity:
               321
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 44
               

               Conread position:
               1-456
               

               Cow position:
               
               

               Alignm length:
               458
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               279, 66
               

               Conread position:
               1-456
               

               Cow position:
               
               

               Alignm length:
               472
               

               Alignm identity:
               338
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 33
               

               Conread position:
               1-594
               

               Cow position:
               
               

               Alignm length:
               602
               

               Alignm identity:
               414
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 132
               

               Conread position:
               4-387
               

               Cow position:
               
               

               Alignm length:
               387
               

               Alignm identity:
               269
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               24, 61
               

               Conread position:
               6-311
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 37
               

               Conread position:
               6-456
               

               Cow position:
               
               

               Alignm length:
               454
               

               Alignm identity:
               316
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               230, 61
               

               Conread position:
               6-456
               

               Cow position:
               
               

               Alignm length:
               460
               

               Alignm identity:
               327
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 39
               

               Conread position:
               6-456
               

               Cow position:
               
               

               Alignm length:
               462
               

               Alignm identity:
               326
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 39
               

               Conread position:
               7-456
               

               Cow position:
               
               

               Alignm length:
               453
               

               Alignm identity:
               313
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               60, 27
               

               Conread position:
               8-356
               

               Cow position:
               
               

               Alignm length:
               353
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 33
               

               Conread position:
               8-456
               

               Cow position:
               
               

               Alignm length:
               455
               

               Alignm identity:
               312
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 37
               

               Conread position:
               8-456
               

               Cow position:
               
               

               Alignm length:
               453
               

               Alignm identity:
               304
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               111, 33
               

               Conread position:
               8-456
               

               Cow position:
               
               

               Alignm length:
               455
               

               Alignm identity:
               305
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               59, 33
               

               Conread position:
               8-456
               

               Cow position:
               
               

               Alignm length:
               459
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 33
               

               Conread position:
               8-458
               

               Cow position:
               
               

               Alignm length:
               459
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 180
               

               Conread position:
               12-383
               

               Cow position:
               
               

               Alignm length:
               379
               

               Alignm identity:
               257
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               55, 31
               

               Conread position:
               17-452
               

               Cow position:
               
               

               Alignm length:
               448
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 17
               

               Conread position:
               20-428
               

               Cow position:
               
               

               Alignm length:
               413
               

               Alignm identity:
               296
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 120
               

               Conread position:
               22-456
               

               Cow position:
               
               

               Alignm length:
               443
               

               Alignm identity:
               311
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 129
               

               Conread position:
               30-456
               

               Cow position:
               
               

               Alignm length:
               433
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               259, 13
               

               Conread position:
               52-331
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               202
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               125, 98
               

               Conread position:
               55-422
               

               Cow position:
               
               

               Alignm length:
               379
               

               Alignm identity:
               242
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               12, 74
               

               Conread position:
               63-563
               

               Cow position:
               
               

               Alignm length:
               505
               

               Alignm identity:
               351
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               110, 213
               

               Conread position:
               76-437
               

               Cow position:
               
               

               Alignm length:
               364
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 58
               

               Conread position:
               76-452
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               264
               

               Alignm E-value:
               8.00141e-43
               

               Alignm gaps (pig, cow):
               63, 56
               

               Conread position:
               84-456
               

               Cow position:
               
               

               Alignm length:
               376
               

               Alignm identity:
               260
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               205, 66
               

               Conread position:
               85-456
               

               Cow position:
               
               

               Alignm length:
               374
               

               Alignm identity:
               257
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               204, 65
               

               Conread position:
               147-456
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               220
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               32, 37
               

               Conread position:
               152-452
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               195
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               78, 259
               

               Conread position:
               177-456
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               103, 138
               

               Conread position:
               194-456
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               197
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               11, 216
               

               Conread position:
               194-456
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               197
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               11, 216
               

               Conread position:
               202-456
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               180
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               87, 22
               

               Conread position:
               205-426
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               151
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               7, 28
               

               Conread position:
               205-456
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               181
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               20, 148
               

               Conread position:
               207-424
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               81, 9
               

               Conread position:
               208-456
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               183
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               20, 95
               

               Conread position:
               211-460
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               181
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               20, 125
               

               Conread position:
               214-401
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               132
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               225-451
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               164
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               64, 185
               

               Conread position:
               225-456
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               171
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               70, 180
               

               Conread position:
               280-456
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               128
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               95, 126
               
Show alignments to all cow chromosomes.