Cow genome map
| Conread name: | Liv1-LVRM10127A01 |
| Conread position: | 1-310 |
| Cow position: | chr29:7430131-7429825 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 222 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 66, 44 |
| Conread position: | 1-321 |
| Cow position: | chr29:8774226-8773910 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 211 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 302, 40 |
| Conread position: | 1-337 |
| Cow position: | chr29:38237435-38237111 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 229 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 67, 40 |
| Conread position: | 1-447 |
| Cow position: | chr29:10647162-10646734 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 44 |
| Conread position: | 1-456 |
| Cow position: | chr29:2100938-2101366 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 310 |
| Alignm E-value: | 8.96831e-44 |
| Alignm gaps (pig, cow): | 66, 44 |
| Conread position: | 1-456 |
| Cow position: | chr29:3328421-3328866 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 40 |
| Conread position: | 1-456 |
| Cow position: | chr29:14587010-14587446 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 279, 33 |
| Conread position: | 1-456 |
| Cow position: | chr29:16023657-16024090 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 40 |
| Conread position: | 1-456 |
| Cow position: | chr29:18855863-18855418 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 40 |
| Conread position: | 1-456 |
| Cow position: | chr29:19622195-19621752 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 44 |
| Conread position: | 1-456 |
| Cow position: | chr29:19654715-19655147 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 46 |
| Conread position: | 1-456 |
| Cow position: | chr29:23977211-23977650 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 33 |
| Conread position: | 1-456 |
| Cow position: | chr29:26163746-26163306 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 279, 44 |
| Conread position: | 1-456 |
| Cow position: | chr29:32541182-32541621 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 33 |
| Conread position: | 1-456 |
| Cow position: | chr29:38228065-38228505 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 44 |
| Conread position: | 1-456 |
| Cow position: | chr29:39078618-39078184 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 279, 66 |
| Conread position: | 1-456 |
| Cow position: | chr29:45460819-45461274 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 33 |
| Conread position: | 1-594 |
| Cow position: | chr29:25931444-25930877 (view UCSC Genome Browser custom track) |
| Alignm length: | 602 |
| Alignm identity: | 414 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 132 |
| Conread position: | 4-387 |
| Cow position: | chr29:30259433-30259079 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 269 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 24, 61 |
| Conread position: | 6-311 |
| Cow position: | chr29:10822890-10822594 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 37 |
| Conread position: | 6-456 |
| Cow position: | chr29:2840251-2839815 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 230, 61 |
| Conread position: | 6-456 |
| Cow position: | chr29:5236109-5236548 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 39 |
| Conread position: | 6-456 |
| Cow position: | chr29:14210477-14210025 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 39 |
| Conread position: | 7-456 |
| Cow position: | chr29:40501890-40501480 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 313 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 60, 27 |
| Conread position: | 8-356 |
| Cow position: | chr29:35814881-35814543 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 33 |
| Conread position: | 8-456 |
| Cow position: | chr29:7845481-7845917 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 37 |
| Conread position: | 8-456 |
| Cow position: | chr29:27979830-27979393 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 111, 33 |
| Conread position: | 8-456 |
| Cow position: | chr29:31182498-31182929 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 305 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 59, 33 |
| Conread position: | 8-456 |
| Cow position: | chr29:38207581-38207137 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 33 |
| Conread position: | 8-458 |
| Cow position: | chr29:32558667-32558224 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 180 |
| Conread position: | 12-383 |
| Cow position: | chr29:2465757-2465397 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 257 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 55, 31 |
| Conread position: | 17-452 |
| Cow position: | chr29:42939094-42938669 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 17 |
| Conread position: | 20-428 |
| Cow position: | chr29:5981605-5981209 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 120 |
| Conread position: | 22-456 |
| Cow position: | chr29:42092867-42093292 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 129 |
| Conread position: | 30-456 |
| Cow position: | chr29:15997535-15997125 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 259, 13 |
| Conread position: | 52-331 |
| Cow position: | chr29:9642654-9642384 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 202 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 125, 98 |
| Conread position: | 55-422 |
| Cow position: | chr29:16635067-16635437 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 242 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 12, 74 |
| Conread position: | 63-563 |
| Cow position: | chr29:12793363-12793847 (view UCSC Genome Browser custom track) |
| Alignm length: | 505 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 110, 213 |
| Conread position: | 76-437 |
| Cow position: | chr29:21425854-21425512 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 58 |
| Conread position: | 76-452 |
| Cow position: | chr29:8664670-8665028 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 264 |
| Alignm E-value: | 8.00141e-43 |
| Alignm gaps (pig, cow): | 63, 56 |
| Conread position: | 84-456 |
| Cow position: | chr29:2691335-2691690 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 260 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 205, 66 |
| Conread position: | 85-456 |
| Cow position: | chr29:6264829-6264473 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 257 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 204, 65 |
| Conread position: | 147-456 |
| Cow position: | chr29:21431625-21431325 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 220 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 32, 37 |
| Conread position: | 152-452 |
| Cow position: | chr29:13851652-13851348 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 195 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 78, 259 |
| Conread position: | 177-456 |
| Cow position: | chr29:35298160-35298437 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 103, 138 |
| Conread position: | 194-456 |
| Cow position: | chr29:10023073-10022805 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 197 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 11, 216 |
| Conread position: | 194-456 |
| Cow position: | chr29:29503000-29502732 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 197 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 11, 216 |
| Conread position: | 202-456 |
| Cow position: | chr29:409975-409721 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 180 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 87, 22 |
| Conread position: | 205-426 |
| Cow position: | chr29:34551640-34551863 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 151 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 7, 28 |
| Conread position: | 205-456 |
| Cow position: | chr29:6198481-6198226 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 20, 148 |
| Conread position: | 207-424 |
| Cow position: | chr29:4633344-4633130 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 81, 9 |
| Conread position: | 208-456 |
| Cow position: | chr29:19888860-19889113 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 183 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 20, 95 |
| Conread position: | 211-460 |
| Cow position: | chr29:27262434-27262185 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 181 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 20, 125 |
| Conread position: | 214-401 |
| Cow position: | chr29:21265994-21266185 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 225-451 |
| Cow position: | chr29:4516859-4517086 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 164 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 64, 185 |
| Conread position: | 225-456 |
| Cow position: | chr29:27180458-27180226 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 171 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 70, 180 |
| Conread position: | 280-456 |
| Cow position: | chr29:7429772-7429599 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 95, 126 |
Show alignments to all cow chromosomes.