Cow genome map
Conread name: | Liv1-LVRM10127A01 |
Conread position: | 1-351 |
Cow position: | chr5:29434812-29434484 (view UCSC Genome Browser custom track) |
Alignm length: | 355 |
Alignm identity: | 251 |
Alignm E-value: | 9e-39 |
Alignm gaps (pig, cow): | 15, 43 |
Conread position: | 1-386 |
Cow position: | chr5:41527887-41527517 (view UCSC Genome Browser custom track) |
Alignm length: | 390 |
Alignm identity: | 280 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 243, 40 |
Conread position: | 1-389 |
Cow position: | chr5:14784451-14784090 (view UCSC Genome Browser custom track) |
Alignm length: | 392 |
Alignm identity: | 273 |
Alignm E-value: | 3e-40 |
Alignm gaps (pig, cow): | 302, 28 |
Conread position: | 1-398 |
Cow position: | chr5:40788970-40789355 (view UCSC Genome Browser custom track) |
Alignm length: | 411 |
Alignm identity: | 286 |
Alignm E-value: | 9.99967e-42 |
Alignm gaps (pig, cow): | 67, 40 |
Conread position: | 1-402 |
Cow position: | chr5:1341128-1340734 (view UCSC Genome Browser custom track) |
Alignm length: | 408 |
Alignm identity: | 289 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 66, 44 |
Conread position: | 1-423 |
Cow position: | chr5:31100518-31100113 (view UCSC Genome Browser custom track) |
Alignm length: | 428 |
Alignm identity: | 309 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 66, 121 |
Conread position: | 1-432 |
Cow position: | chr5:23669223-23668812 (view UCSC Genome Browser custom track) |
Alignm length: | 440 |
Alignm identity: | 313 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 66, 27 |
Conread position: | 1-452 |
Cow position: | chr5:54791728-54791287 (view UCSC Genome Browser custom track) |
Alignm length: | 455 |
Alignm identity: | 317 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 65, 33 |
Conread position: | 1-452 |
Cow position: | chr5:55628896-55629332 (view UCSC Genome Browser custom track) |
Alignm length: | 455 |
Alignm identity: | 328 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 66, 44 |
Conread position: | 1-454 |
Cow position: | chr5:4070113-4070565 (view UCSC Genome Browser custom track) |
Alignm length: | 470 |
Alignm identity: | 325 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 66, 44 |
Conread position: | 1-455 |
Cow position: | chr5:45701220-45701657 (view UCSC Genome Browser custom track) |
Alignm length: | 460 |
Alignm identity: | 332 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 67, 39 |
Conread position: | 1-455 |
Cow position: | chr5:51308955-51308512 (view UCSC Genome Browser custom track) |
Alignm length: | 459 |
Alignm identity: | 327 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 111, 33 |
Conread position: | 1-456 |
Cow position: | chr5:3503201-3502758 (view UCSC Genome Browser custom track) |
Alignm length: | 459 |
Alignm identity: | 325 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 288, 44 |
Conread position: | 1-456 |
Cow position: | chr5:4386148-4386586 (view UCSC Genome Browser custom track) |
Alignm length: | 458 |
Alignm identity: | 316 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 288, 42 |
Conread position: | 1-456 |
Cow position: | chr5:6153998-6153549 (view UCSC Genome Browser custom track) |
Alignm length: | 460 |
Alignm identity: | 322 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 66, 44 |
Conread position: | 1-456 |
Cow position: | chr5:10775364-10774914 (view UCSC Genome Browser custom track) |
Alignm length: | 464 |
Alignm identity: | 317 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 67, 40 |
Conread position: | 1-456 |
Cow position: | chr5:10855911-10855468 (view UCSC Genome Browser custom track) |
Alignm length: | 461 |
Alignm identity: | 327 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 67, 42 |
Conread position: | 1-456 |
Cow position: | chr5:15375621-15376034 (view UCSC Genome Browser custom track) |
Alignm length: | 458 |
Alignm identity: | 313 |
Alignm E-value: | 7e-37 |
Alignm gaps (pig, cow): | 280, 40 |
Conread position: | 1-456 |
Cow position: | chr5:18400786-18400349 (view UCSC Genome Browser custom track) |
Alignm length: | 461 |
Alignm identity: | 329 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 66, 40 |
Conread position: | 1-456 |
Cow position: | chr5:18885625-18885182 (view UCSC Genome Browser custom track) |
Alignm length: | 464 |
Alignm identity: | 328 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 63, 33 |
Conread position: | 1-456 |
Cow position: | chr5:30580243-30580693 (view UCSC Genome Browser custom track) |
Alignm length: | 462 |
Alignm identity: | 324 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 66, 112 |
Conread position: | 1-456 |
Cow position: | chr5:34697509-34697946 (view UCSC Genome Browser custom track) |
Alignm length: | 459 |
Alignm identity: | 331 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 288, 49 |
Conread position: | 1-456 |
Cow position: | chr5:37733252-37733698 (view UCSC Genome Browser custom track) |
Alignm length: | 461 |
Alignm identity: | 327 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 66, 45 |
Conread position: | 1-456 |
Cow position: | chr5:41960829-41960397 (view UCSC Genome Browser custom track) |
Alignm length: | 460 |
Alignm identity: | 324 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 66, 43 |
Conread position: | 1-456 |
Cow position: | chr5:48807834-48807384 (view UCSC Genome Browser custom track) |
Alignm length: | 459 |
Alignm identity: | 322 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 66, 44 |
Conread position: | 1-456 |
Cow position: | chr5:57481634-57481190 (view UCSC Genome Browser custom track) |
Alignm length: | 460 |
Alignm identity: | 319 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 66, 33 |
Conread position: | 1-456 |
Cow position: | chr5:64781111-64780665 (view UCSC Genome Browser custom track) |
Alignm length: | 465 |
Alignm identity: | 340 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 66, 33 |
Conread position: | 2-385 |
Cow position: | chr5:41554430-41554059 (view UCSC Genome Browser custom track) |
Alignm length: | 392 |
Alignm identity: | 265 |
Alignm E-value: | 2e-34 |
Alignm gaps (pig, cow): | 65, 39 |
Conread position: | 2-397 |
Cow position: | chr5:60716703-60716324 (view UCSC Genome Browser custom track) |
Alignm length: | 402 |
Alignm identity: | 268 |
Alignm E-value: | 5e-34 |
Alignm gaps (pig, cow): | 88, 39 |
Conread position: | 2-428 |
Cow position: | chr5:29767035-29767444 (view UCSC Genome Browser custom track) |
Alignm length: | 433 |
Alignm identity: | 302 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 65, 39 |
Conread position: | 3-373 |
Cow position: | chr5:23686985-23686634 (view UCSC Genome Browser custom track) |
Alignm length: | 373 |
Alignm identity: | 265 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 31, 19 |
Conread position: | 3-426 |
Cow position: | chr5:62413883-62414290 (view UCSC Genome Browser custom track) |
Alignm length: | 428 |
Alignm identity: | 271 |
Alignm E-value: | 3e-27 |
Alignm gaps (pig, cow): | 76, 10 |
Conread position: | 4-441 |
Cow position: | chr5:7143139-7142731 (view UCSC Genome Browser custom track) |
Alignm length: | 438 |
Alignm identity: | 255 |
Alignm E-value: | 4e-31 |
Alignm gaps (pig, cow): | 122, 0 |
Conread position: | 6-456 |
Cow position: | chr5:2915359-2915783 (view UCSC Genome Browser custom track) |
Alignm length: | 452 |
Alignm identity: | 318 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 61, 28 |
Conread position: | 6-456 |
Cow position: | chr5:18560493-18560058 (view UCSC Genome Browser custom track) |
Alignm length: | 457 |
Alignm identity: | 330 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 133, 37 |
Conread position: | 7-316 |
Cow position: | chr5:53625012-53624714 (view UCSC Genome Browser custom track) |
Alignm length: | 312 |
Alignm identity: | 199 |
Alignm E-value: | 5.60519e-45 |
Alignm gaps (pig, cow): | 60, 34 |
Conread position: | 8-452 |
Cow position: | chr5:12731798-12731370 (view UCSC Genome Browser custom track) |
Alignm length: | 449 |
Alignm identity: | 309 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 59, 33 |
Conread position: | 8-452 |
Cow position: | chr5:27908357-27907926 (view UCSC Genome Browser custom track) |
Alignm length: | 449 |
Alignm identity: | 310 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 60, 33 |
Conread position: | 8-456 |
Cow position: | chr5:988150-987719 (view UCSC Genome Browser custom track) |
Alignm length: | 458 |
Alignm identity: | 323 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 59, 33 |
Conread position: | 8-456 |
Cow position: | chr5:10842467-10842032 (view UCSC Genome Browser custom track) |
Alignm length: | 451 |
Alignm identity: | 305 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 288, 37 |
Conread position: | 8-456 |
Cow position: | chr5:18121571-18121133 (view UCSC Genome Browser custom track) |
Alignm length: | 454 |
Alignm identity: | 304 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 59, 35 |
Conread position: | 8-456 |
Cow position: | chr5:26078282-26077844 (view UCSC Genome Browser custom track) |
Alignm length: | 454 |
Alignm identity: | 313 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 59, 105 |
Conread position: | 8-456 |
Cow position: | chr5:31707475-31707912 (view UCSC Genome Browser custom track) |
Alignm length: | 457 |
Alignm identity: | 318 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 59, 33 |
Conread position: | 8-456 |
Cow position: | chr5:32773677-32774114 (view UCSC Genome Browser custom track) |
Alignm length: | 457 |
Alignm identity: | 320 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 59, 33 |
Conread position: | 8-456 |
Cow position: | chr5:35301009-35301447 (view UCSC Genome Browser custom track) |
Alignm length: | 452 |
Alignm identity: | 314 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 59, 143 |
Conread position: | 8-456 |
Cow position: | chr5:59061548-59061985 (view UCSC Genome Browser custom track) |
Alignm length: | 457 |
Alignm identity: | 323 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 59, 33 |
Conread position: | 9-299 |
Cow position: | chr5:29670067-29670349 (view UCSC Genome Browser custom track) |
Alignm length: | 299 |
Alignm identity: | 205 |
Alignm E-value: | 6e-24 |
Alignm gaps (pig, cow): | 62, 33 |
Conread position: | 9-445 |
Cow position: | chr5:21116666-21117095 (view UCSC Genome Browser custom track) |
Alignm length: | 446 |
Alignm identity: | 288 |
Alignm E-value: | 4e-32 |
Alignm gaps (pig, cow): | 284, 50 |
Conread position: | 10-456 |
Cow position: | chr5:47830165-47829728 (view UCSC Genome Browser custom track) |
Alignm length: | 454 |
Alignm identity: | 310 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 57, 141 |
Conread position: | 14-437 |
Cow position: | chr5:42505923-42506335 (view UCSC Genome Browser custom track) |
Alignm length: | 432 |
Alignm identity: | 300 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 15 |
Conread position: | 14-452 |
Cow position: | chr5:3965365-3965794 (view UCSC Genome Browser custom track) |
Alignm length: | 448 |
Alignm identity: | 304 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 27 |
Conread position: | 15-386 |
Cow position: | chr5:40923720-40923366 (view UCSC Genome Browser custom track) |
Alignm length: | 375 |
Alignm identity: | 268 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 25 |
Conread position: | 16-282 |
Cow position: | chr5:52613036-52612783 (view UCSC Genome Browser custom track) |
Alignm length: | 270 |
Alignm identity: | 184 |
Alignm E-value: | 5e-22 |
Alignm gaps (pig, cow): | 122, 25 |
Conread position: | 16-456 |
Cow position: | chr5:46777313-46777742 (view UCSC Genome Browser custom track) |
Alignm length: | 450 |
Alignm identity: | 317 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 51, 25 |
Conread position: | 17-456 |
Cow position: | chr5:4757256-4756834 (view UCSC Genome Browser custom track) |
Alignm length: | 446 |
Alignm identity: | 306 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 50, 24 |
Conread position: | 17-456 |
Cow position: | chr5:18664704-18665115 (view UCSC Genome Browser custom track) |
Alignm length: | 442 |
Alignm identity: | 300 |
Alignm E-value: | 5.04467e-44 |
Alignm gaps (pig, cow): | 50, 24 |
Conread position: | 17-456 |
Cow position: | chr5:23959408-23958981 (view UCSC Genome Browser custom track) |
Alignm length: | 448 |
Alignm identity: | 311 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 50, 24 |
Conread position: | 17-456 |
Cow position: | chr5:49519481-49519897 (view UCSC Genome Browser custom track) |
Alignm length: | 443 |
Alignm identity: | 324 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 50, 17 |
Conread position: | 18-434 |
Cow position: | chr5:49072731-49072336 (view UCSC Genome Browser custom track) |
Alignm length: | 420 |
Alignm identity: | 278 |
Alignm E-value: | 2e-33 |
Alignm gaps (pig, cow): | 46, 11 |
Conread position: | 30-344 |
Cow position: | chr5:43193474-43193174 (view UCSC Genome Browser custom track) |
Alignm length: | 319 |
Alignm identity: | 215 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 35, 22 |
Conread position: | 30-456 |
Cow position: | chr5:7274777-7275183 (view UCSC Genome Browser custom track) |
Alignm length: | 430 |
Alignm identity: | 301 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 37, 86 |
Conread position: | 35-436 |
Cow position: | chr5:2738835-2739227 (view UCSC Genome Browser custom track) |
Alignm length: | 406 |
Alignm identity: | 254 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 33, 15 |
Conread position: | 38-456 |
Cow position: | chr5:23229934-23230333 (view UCSC Genome Browser custom track) |
Alignm length: | 421 |
Alignm identity: | 274 |
Alignm E-value: | 7e-36 |
Alignm gaps (pig, cow): | 29, 44 |
Conread position: | 54-383 |
Cow position: | chr5:18273718-18274036 (view UCSC Genome Browser custom track) |
Alignm length: | 334 |
Alignm identity: | 231 |
Alignm E-value: | 3e-38 |
Alignm gaps (pig, cow): | 13, 97 |
Conread position: | 59-456 |
Cow position: | chr5:18549117-18549511 (view UCSC Genome Browser custom track) |
Alignm length: | 406 |
Alignm identity: | 274 |
Alignm E-value: | 1.00053e-42 |
Alignm gaps (pig, cow): | 112, 91 |
Conread position: | 61-576 |
Cow position: | chr5:46645907-46646423 (view UCSC Genome Browser custom track) |
Alignm length: | 529 |
Alignm identity: | 347 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 141, 12 |
Conread position: | 63-456 |
Cow position: | chr5:10813784-10813401 (view UCSC Genome Browser custom track) |
Alignm length: | 401 |
Alignm identity: | 286 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 116, 87 |
Conread position: | 73-383 |
Cow position: | chr5:27003212-27003514 (view UCSC Genome Browser custom track) |
Alignm length: | 319 |
Alignm identity: | 232 |
Alignm E-value: | 4.00001e-41 |
Alignm gaps (pig, cow): | 206, 59 |
Conread position: | 113-456 |
Cow position: | chr5:61081197-61080861 (view UCSC Genome Browser custom track) |
Alignm length: | 350 |
Alignm identity: | 233 |
Alignm E-value: | 4e-31 |
Alignm gaps (pig, cow): | 261, 17 |
Conread position: | 115-464 |
Cow position: | chr5:52434757-52435094 (view UCSC Genome Browser custom track) |
Alignm length: | 355 |
Alignm identity: | 240 |
Alignm E-value: | 2e-34 |
Alignm gaps (pig, cow): | 170, 66 |
Conread position: | 134-387 |
Cow position: | chr5:11115713-11115472 (view UCSC Genome Browser custom track) |
Alignm length: | 254 |
Alignm identity: | 190 |
Alignm E-value: | 1.00053e-42 |
Alignm gaps (pig, cow): | 16, 0 |
Conread position: | 138-456 |
Cow position: | chr5:55653803-55653496 (view UCSC Genome Browser custom track) |
Alignm length: | 322 |
Alignm identity: | 222 |
Alignm E-value: | 7e-36 |
Alignm gaps (pig, cow): | 142, 12 |
Conread position: | 150-384 |
Cow position: | chr5:53624779-53624549 (view UCSC Genome Browser custom track) |
Alignm length: | 235 |
Alignm identity: | 136 |
Alignm E-value: | 3e-29 |
Alignm gaps (pig, cow): | 138, 0 |
Conread position: | 161-441 |
Cow position: | chr5:13046707-13046993 (view UCSC Genome Browser custom track) |
Alignm length: | 289 |
Alignm identity: | 192 |
Alignm E-value: | 9e-28 |
Alignm gaps (pig, cow): | 33, 49 |
Conread position: | 166-456 |
Cow position: | chr5:9038078-9037792 (view UCSC Genome Browser custom track) |
Alignm length: | 296 |
Alignm identity: | 194 |
Alignm E-value: | 5e-22 |
Alignm gaps (pig, cow): | 18, 30 |
Conread position: | 180-452 |
Cow position: | chr5:34189986-34190259 (view UCSC Genome Browser custom track) |
Alignm length: | 279 |
Alignm identity: | 192 |
Alignm E-value: | 1e-32 |
Alignm gaps (pig, cow): | 44, 17 |
Conread position: | 187-375 |
Cow position: | chr5:40757540-40757725 (view UCSC Genome Browser custom track) |
Alignm length: | 190 |
Alignm identity: | 136 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 19, 11 |
Conread position: | 198-456 |
Cow position: | chr5:35527034-35527277 (view UCSC Genome Browser custom track) |
Alignm length: | 263 |
Alignm identity: | 185 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 12, 29 |
Conread position: | 200-536 |
Cow position: | chr5:16917384-16917055 (view UCSC Genome Browser custom track) |
Alignm length: | 341 |
Alignm identity: | 196 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 15, 121 |
Conread position: | 202-452 |
Cow position: | chr5:53703124-53702883 (view UCSC Genome Browser custom track) |
Alignm length: | 255 |
Alignm identity: | 175 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 78, 141 |
Conread position: | 202-456 |
Cow position: | chr5:24295712-24295963 (view UCSC Genome Browser custom track) |
Alignm length: | 256 |
Alignm identity: | 178 |
Alignm E-value: | 2e-33 |
Alignm gaps (pig, cow): | 13, 36 |
Conread position: | 203-453 |
Cow position: | chr5:69622680-69622936 (view UCSC Genome Browser custom track) |
Alignm length: | 259 |
Alignm identity: | 176 |
Alignm E-value: | 7e-26 |
Alignm gaps (pig, cow): | 6, 43 |
Conread position: | 205-456 |
Cow position: | chr5:53945938-53946178 (view UCSC Genome Browser custom track) |
Alignm length: | 255 |
Alignm identity: | 180 |
Alignm E-value: | 1e-28 |
Alignm gaps (pig, cow): | 170, 127 |
Conread position: | 207-455 |
Cow position: | chr5:54620150-54620392 (view UCSC Genome Browser custom track) |
Alignm length: | 250 |
Alignm identity: | 170 |
Alignm E-value: | 8e-27 |
Alignm gaps (pig, cow): | 84, 96 |
Conread position: | 209-406 |
Cow position: | chr5:18114479-18114280 (view UCSC Genome Browser custom track) |
Alignm length: | 201 |
Alignm identity: | 136 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 6, 149 |
Conread position: | 209-452 |
Cow position: | chr5:34298025-34298253 (view UCSC Genome Browser custom track) |
Alignm length: | 244 |
Alignm identity: | 182 |
Alignm E-value: | 7e-36 |
Alignm gaps (pig, cow): | 19, 0 |
Conread position: | 255-466 |
Cow position: | chr5:62823645-62823845 (view UCSC Genome Browser custom track) |
Alignm length: | 213 |
Alignm identity: | 158 |
Alignm E-value: | 4e-31 |
Alignm gaps (pig, cow): | 129, 21 |
Show alignments to all cow chromosomes.