Cow genome map


           Conread name:
           Liv1-LVRM10127A01
        

               Conread position:
               1-351
               

               Cow position:
               
               

               Alignm length:
               355
               

               Alignm identity:
               251
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               15, 43
               

               Conread position:
               1-386
               

               Cow position:
               
               

               Alignm length:
               390
               

               Alignm identity:
               280
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               243, 40
               

               Conread position:
               1-389
               

               Cow position:
               
               

               Alignm length:
               392
               

               Alignm identity:
               273
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               302, 28
               

               Conread position:
               1-398
               

               Cow position:
               
               

               Alignm length:
               411
               

               Alignm identity:
               286
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               67, 40
               

               Conread position:
               1-402
               

               Cow position:
               
               

               Alignm length:
               408
               

               Alignm identity:
               289
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 44
               

               Conread position:
               1-423
               

               Cow position:
               
               

               Alignm length:
               428
               

               Alignm identity:
               309
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 121
               

               Conread position:
               1-432
               

               Cow position:
               
               

               Alignm length:
               440
               

               Alignm identity:
               313
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 27
               

               Conread position:
               1-452
               

               Cow position:
               
               

               Alignm length:
               455
               

               Alignm identity:
               317
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 33
               

               Conread position:
               1-452
               

               Cow position:
               
               

               Alignm length:
               455
               

               Alignm identity:
               328
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 44
               

               Conread position:
               1-454
               

               Cow position:
               
               

               Alignm length:
               470
               

               Alignm identity:
               325
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 44
               

               Conread position:
               1-455
               

               Cow position:
               
               

               Alignm length:
               460
               

               Alignm identity:
               332
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 39
               

               Conread position:
               1-455
               

               Cow position:
               
               

               Alignm length:
               459
               

               Alignm identity:
               327
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               111, 33
               

               Conread position:
               1-456
               

               Cow position:
               
               

               Alignm length:
               459
               

               Alignm identity:
               325
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               288, 44
               

               Conread position:
               1-456
               

               Cow position:
               
               

               Alignm length:
               458
               

               Alignm identity:
               316
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               288, 42
               

               Conread position:
               1-456
               

               Cow position:
               
               

               Alignm length:
               460
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 44
               

               Conread position:
               1-456
               

               Cow position:
               
               

               Alignm length:
               464
               

               Alignm identity:
               317
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 40
               

               Conread position:
               1-456
               

               Cow position:
               
               

               Alignm length:
               461
               

               Alignm identity:
               327
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 42
               

               Conread position:
               1-456
               

               Cow position:
               
               

               Alignm length:
               458
               

               Alignm identity:
               313
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               280, 40
               

               Conread position:
               1-456
               

               Cow position:
               
               

               Alignm length:
               461
               

               Alignm identity:
               329
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 40
               

               Conread position:
               1-456
               

               Cow position:
               
               

               Alignm length:
               464
               

               Alignm identity:
               328
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 33
               

               Conread position:
               1-456
               

               Cow position:
               
               

               Alignm length:
               462
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 112
               

               Conread position:
               1-456
               

               Cow position:
               
               

               Alignm length:
               459
               

               Alignm identity:
               331
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               288, 49
               

               Conread position:
               1-456
               

               Cow position:
               
               

               Alignm length:
               461
               

               Alignm identity:
               327
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 45
               

               Conread position:
               1-456
               

               Cow position:
               
               

               Alignm length:
               460
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 43
               

               Conread position:
               1-456
               

               Cow position:
               
               

               Alignm length:
               459
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 44
               

               Conread position:
               1-456
               

               Cow position:
               
               

               Alignm length:
               460
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 33
               

               Conread position:
               1-456
               

               Cow position:
               
               

               Alignm length:
               465
               

               Alignm identity:
               340
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 33
               

               Conread position:
               2-385
               

               Cow position:
               
               

               Alignm length:
               392
               

               Alignm identity:
               265
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               65, 39
               

               Conread position:
               2-397
               

               Cow position:
               
               

               Alignm length:
               402
               

               Alignm identity:
               268
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               88, 39
               

               Conread position:
               2-428
               

               Cow position:
               
               

               Alignm length:
               433
               

               Alignm identity:
               302
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 39
               

               Conread position:
               3-373
               

               Cow position:
               
               

               Alignm length:
               373
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 19
               

               Conread position:
               3-426
               

               Cow position:
               
               

               Alignm length:
               428
               

               Alignm identity:
               271
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               76, 10
               

               Conread position:
               4-441
               

               Cow position:
               
               

               Alignm length:
               438
               

               Alignm identity:
               255
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               122, 0
               

               Conread position:
               6-456
               

               Cow position:
               
               

               Alignm length:
               452
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 28
               

               Conread position:
               6-456
               

               Cow position:
               
               

               Alignm length:
               457
               

               Alignm identity:
               330
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               133, 37
               

               Conread position:
               7-316
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               199
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               60, 34
               

               Conread position:
               8-452
               

               Cow position:
               
               

               Alignm length:
               449
               

               Alignm identity:
               309
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 33
               

               Conread position:
               8-452
               

               Cow position:
               
               

               Alignm length:
               449
               

               Alignm identity:
               310
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 33
               

               Conread position:
               8-456
               

               Cow position:
               
               

               Alignm length:
               458
               

               Alignm identity:
               323
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 33
               

               Conread position:
               8-456
               

               Cow position:
               
               

               Alignm length:
               451
               

               Alignm identity:
               305
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               288, 37
               

               Conread position:
               8-456
               

               Cow position:
               
               

               Alignm length:
               454
               

               Alignm identity:
               304
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 35
               

               Conread position:
               8-456
               

               Cow position:
               
               

               Alignm length:
               454
               

               Alignm identity:
               313
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 105
               

               Conread position:
               8-456
               

               Cow position:
               
               

               Alignm length:
               457
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 33
               

               Conread position:
               8-456
               

               Cow position:
               
               

               Alignm length:
               457
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 33
               

               Conread position:
               8-456
               

               Cow position:
               
               

               Alignm length:
               452
               

               Alignm identity:
               314
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 143
               

               Conread position:
               8-456
               

               Cow position:
               
               

               Alignm length:
               457
               

               Alignm identity:
               323
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 33
               

               Conread position:
               9-299
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               205
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               62, 33
               

               Conread position:
               9-445
               

               Cow position:
               
               

               Alignm length:
               446
               

               Alignm identity:
               288
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               284, 50
               

               Conread position:
               10-456
               

               Cow position:
               
               

               Alignm length:
               454
               

               Alignm identity:
               310
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 141
               

               Conread position:
               14-437
               

               Cow position:
               
               

               Alignm length:
               432
               

               Alignm identity:
               300
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 15
               

               Conread position:
               14-452
               

               Cow position:
               
               

               Alignm length:
               448
               

               Alignm identity:
               304
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 27
               

               Conread position:
               15-386
               

               Cow position:
               
               

               Alignm length:
               375
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 25
               

               Conread position:
               16-282
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               184
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               122, 25
               

               Conread position:
               16-456
               

               Cow position:
               
               

               Alignm length:
               450
               

               Alignm identity:
               317
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 25
               

               Conread position:
               17-456
               

               Cow position:
               
               

               Alignm length:
               446
               

               Alignm identity:
               306
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 24
               

               Conread position:
               17-456
               

               Cow position:
               
               

               Alignm length:
               442
               

               Alignm identity:
               300
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               50, 24
               

               Conread position:
               17-456
               

               Cow position:
               
               

               Alignm length:
               448
               

               Alignm identity:
               311
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 24
               

               Conread position:
               17-456
               

               Cow position:
               
               

               Alignm length:
               443
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 17
               

               Conread position:
               18-434
               

               Cow position:
               
               

               Alignm length:
               420
               

               Alignm identity:
               278
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               46, 11
               

               Conread position:
               30-344
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               215
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               35, 22
               

               Conread position:
               30-456
               

               Cow position:
               
               

               Alignm length:
               430
               

               Alignm identity:
               301
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 86
               

               Conread position:
               35-436
               

               Cow position:
               
               

               Alignm length:
               406
               

               Alignm identity:
               254
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               33, 15
               

               Conread position:
               38-456
               

               Cow position:
               
               

               Alignm length:
               421
               

               Alignm identity:
               274
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               29, 44
               

               Conread position:
               54-383
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               231
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               13, 97
               

               Conread position:
               59-456
               

               Cow position:
               
               

               Alignm length:
               406
               

               Alignm identity:
               274
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               112, 91
               

               Conread position:
               61-576
               

               Cow position:
               
               

               Alignm length:
               529
               

               Alignm identity:
               347
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               141, 12
               

               Conread position:
               63-456
               

               Cow position:
               
               

               Alignm length:
               401
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               116, 87
               

               Conread position:
               73-383
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               232
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               206, 59
               

               Conread position:
               113-456
               

               Cow position:
               
               

               Alignm length:
               350
               

               Alignm identity:
               233
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               261, 17
               

               Conread position:
               115-464
               

               Cow position:
               
               

               Alignm length:
               355
               

               Alignm identity:
               240
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               170, 66
               

               Conread position:
               134-387
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               190
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               138-456
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               222
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               142, 12
               

               Conread position:
               150-384
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               136
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               138, 0
               

               Conread position:
               161-441
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               192
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               33, 49
               

               Conread position:
               166-456
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               194
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               18, 30
               

               Conread position:
               180-452
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               192
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               44, 17
               

               Conread position:
               187-375
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               19, 11
               

               Conread position:
               198-456
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               185
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               12, 29
               

               Conread position:
               200-536
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               196
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               15, 121
               

               Conread position:
               202-452
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               78, 141
               

               Conread position:
               202-456
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               13, 36
               

               Conread position:
               203-453
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               176
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               6, 43
               

               Conread position:
               205-456
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               180
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               170, 127
               

               Conread position:
               207-455
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               170
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               84, 96
               

               Conread position:
               209-406
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               136
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               6, 149
               

               Conread position:
               209-452
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               182
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               255-466
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               158
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               129, 21
               
Show alignments to all cow chromosomes.