Cow genome map

Conread name: Liv1-LVRM10127A01

Conread position: 1-373
Cow position: chr7:57211300-57211648 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 260
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 268, 28

Conread position: 1-386
Cow position: chr7:5663697-5664076 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 112

Conread position: 1-389
Cow position: chr7:58994720-58995085 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 155

Conread position: 1-425
Cow position: chr7:51015397-51015805 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 118

Conread position: 1-428
Cow position: chr7:59679988-59680399 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 134

Conread position: 1-452
Cow position: chr7:1371508-1371073 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 44

Conread position: 1-455
Cow position: chr7:14214230-14213800 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 40

Conread position: 1-456
Cow position: chr7:5261788-5261335 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 40

Conread position: 1-456
Cow position: chr7:10430287-10429848 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 44

Conread position: 1-456
Cow position: chr7:13532766-13532336 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 0

Conread position: 1-456
Cow position: chr7:14138459-14138017 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 33

Conread position: 1-456
Cow position: chr7:21126526-21126102 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 44

Conread position: 1-456
Cow position: chr7:21311588-21312031 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 59

Conread position: 1-456
Cow position: chr7:24878744-24878308 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 25

Conread position: 1-456
Cow position: chr7:27101154-27100712 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 33

Conread position: 1-456
Cow position: chr7:33332695-33333140 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 33

Conread position: 1-456
Cow position: chr7:34487050-34487490 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 44

Conread position: 1-456
Cow position: chr7:38397951-38398396 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 150

Conread position: 1-456
Cow position: chr7:42871279-42871719 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 40

Conread position: 1-456
Cow position: chr7:45948003-45947576 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 44

Conread position: 1-456
Cow position: chr7:57563961-57563528 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 25

Conread position: 1-456
Cow position: chr7:66905858-66906304 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 44

Conread position: 1-458
Cow position: chr7:21986562-21986982 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 231, 33

Conread position: 1-460
Cow position: chr7:40268831-40268403 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 0

Conread position: 1-482
Cow position: chr7:41875140-41874685 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 40

Conread position: 1-539
Cow position: chr7:29368887-29368378 (view UCSC Genome Browser custom track)
Alignm length: 545
Alignm identity: 358
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 35, 68

Conread position: 2-396
Cow position: chr7:63949908-63949530 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 287, 39

Conread position: 2-400
Cow position: chr7:68439197-68439575 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 37

Conread position: 2-456
Cow position: chr7:20211929-20211514 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 313
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 286, 39

Conread position: 2-471
Cow position: chr7:59684923-59685401 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 39

Conread position: 3-452
Cow position: chr7:26852591-26853010 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 38

Conread position: 6-456
Cow position: chr7:21233867-21233428 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 28

Conread position: 7-448
Cow position: chr7:24807332-24806915 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 144

Conread position: 8-437
Cow position: chr7:66036317-66036729 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 33

Conread position: 8-452
Cow position: chr7:33311807-33311370 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 314
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 26, 39

Conread position: 8-456
Cow position: chr7:6630158-6629723 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 33

Conread position: 8-456
Cow position: chr7:20060626-20061064 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 33

Conread position: 9-593
Cow position: chr7:20533093-20533655 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 32

Conread position: 10-456
Cow position: chr7:20514635-20514209 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 306
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 15, 32

Conread position: 10-456
Cow position: chr7:65811966-65812399 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 31

Conread position: 12-452
Cow position: chr7:64239857-64239419 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 22

Conread position: 17-429
Cow position: chr7:526128-526517 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 293
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 272, 5

Conread position: 17-452
Cow position: chr7:55536774-55536354 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 28

Conread position: 17-456
Cow position: chr7:3156619-3157045 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 17

Conread position: 17-456
Cow position: chr7:3300016-3299591 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 305
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 54, 24

Conread position: 17-456
Cow position: chr7:6721298-6721717 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 303
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 50, 24

Conread position: 17-456
Cow position: chr7:52763433-52763862 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 24

Conread position: 18-456
Cow position: chr7:6647512-6647094 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 23

Conread position: 19-456
Cow position: chr7:53407748-53408153 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 300
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 20, 61

Conread position: 20-451
Cow position: chr7:6646-7056 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 20

Conread position: 28-380
Cow position: chr7:19990179-19990519 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 254
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 39, 107

Conread position: 36-357
Cow position: chr7:14695204-14695508 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 216
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 30, 93

Conread position: 52-456
Cow position: chr7:445074-444682 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 278
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 237, 7

Conread position: 52-456
Cow position: chr7:61578692-61579078 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 99

Conread position: 63-595
Cow position: chr7:47975118-47974603 (view UCSC Genome Browser custom track)
Alignm length: 546
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 87

Conread position: 70-456
Cow position: chr7:62445942-62445575 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 72

Conread position: 73-456
Cow position: chr7:55041282-55040909 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 221, 77

Conread position: 77-423
Cow position: chr7:43871712-43872047 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 230
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 209, 73

Conread position: 85-456
Cow position: chr7:27788170-27788532 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 259
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 175, 38

Conread position: 91-456
Cow position: chr7:48805215-48804859 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 259
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 88, 59

Conread position: 97-427
Cow position: chr7:30303180-30303498 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 248
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 166, 53

Conread position: 97-454
Cow position: chr7:541732-541402 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 247
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 191, 37

Conread position: 104-456
Cow position: chr7:8143747-8143399 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 243
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 185, 46

Conread position: 105-397
Cow position: chr7:40320432-40320702 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 206
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 279, 28

Conread position: 142-404
Cow position: chr7:39793130-39793396 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 187
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 30, 20

Conread position: 146-393
Cow position: chr7:65452658-65452916 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 181
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 51, 190

Conread position: 185-395
Cow position: chr7:61045920-61045704 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 159
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 13, 69

Conread position: 186-452
Cow position: chr7:33405083-33404823 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 189
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 103, 16

Conread position: 194-456
Cow position: chr7:20557052-20557320 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 187
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 11, 221

Conread position: 195-432
Cow position: chr7:40006603-40006371 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 160
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 184, 28

Conread position: 195-491
Cow position: chr7:39097232-39096939 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 200
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 11, 201

Conread position: 196-470
Cow position: chr7:31095954-31095678 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 201
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 23, 215

Conread position: 200-385
Cow position: chr7:24934235-24934046 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 144
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 9, 0

Conread position: 204-423
Cow position: chr7:34221506-34221287 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 159
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 12, 110

Conread position: 204-432
Cow position: chr7:1403160-1402934 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 164
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 19, 92

Conread position: 205-428
Cow position: chr7:996074-996292 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 169
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 182, 96

Conread position: 207-390
Cow position: chr7:27474093-27474274 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 138
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 81, 51

Conread position: 209-456
Cow position: chr7:48635754-48635991 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 177
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 6, 43

Conread position: 210-381
Cow position: chr7:34417148-34416976 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 132
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 75, 154

Conread position: 210-456
Cow position: chr7:60856725-60856486 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 184
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 75, 128

Conread position: 211-456
Cow position: chr7:54581187-54581434 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 176
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 164, 19

Conread position: 211-463
Cow position: chr7:21313248-21313492 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 180
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 22, 66

Conread position: 215-456
Cow position: chr7:65872266-65872032 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 169
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 160, 20

Conread position: 220-456
Cow position: chr7:18445412-18445180 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 166
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 71, 20

Conread position: 254-456
Cow position: chr7:61809382-61809585 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 152
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 35, 158

Conread position: 276-456
Cow position: chr7:6628007-6627828 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 132
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 19, 44

Conread position: 290-456
Cow position: chr7:11462727-11462562 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 117
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 120, 0

Conread position: 297-456
Cow position: chr7:23250039-23250197 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 122
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 78, 106

Conread position: 305-456
Cow position: chr7:66070699-66070549 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 117
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 70, 98

Show alignments to all cow chromosomes.