Cow genome map


           Conread name:
           Liv1-LVRM10127A01
        

               Conread position:
               1-298
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               211
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               66, 46
               

               Conread position:
               1-432
               

               Cow position:
               
               

               Alignm length:
               441
               

               Alignm identity:
               313
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 42
               

               Conread position:
               1-452
               

               Cow position:
               
               

               Alignm length:
               475
               

               Alignm identity:
               323
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 44
               

               Conread position:
               1-452
               

               Cow position:
               
               

               Alignm length:
               453
               

               Alignm identity:
               316
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 44
               

               Conread position:
               1-452
               

               Cow position:
               
               

               Alignm length:
               453
               

               Alignm identity:
               325
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 44
               

               Conread position:
               1-456
               

               Cow position:
               
               

               Alignm length:
               459
               

               Alignm identity:
               313
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 28
               

               Conread position:
               1-456
               

               Cow position:
               
               

               Alignm length:
               460
               

               Alignm identity:
               317
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 42
               

               Conread position:
               1-456
               

               Cow position:
               
               

               Alignm length:
               462
               

               Alignm identity:
               321
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 44
               

               Conread position:
               1-456
               

               Cow position:
               
               

               Alignm length:
               463
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 44
               

               Conread position:
               1-456
               

               Cow position:
               
               

               Alignm length:
               468
               

               Alignm identity:
               329
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 44
               

               Conread position:
               1-456
               

               Cow position:
               
               

               Alignm length:
               460
               

               Alignm identity:
               329
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 44
               

               Conread position:
               1-456
               

               Cow position:
               
               

               Alignm length:
               461
               

               Alignm identity:
               327
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 44
               

               Conread position:
               1-456
               

               Cow position:
               
               

               Alignm length:
               468
               

               Alignm identity:
               327
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 28
               

               Conread position:
               1-456
               

               Cow position:
               
               

               Alignm length:
               461
               

               Alignm identity:
               332
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               218, 44
               

               Conread position:
               1-456
               

               Cow position:
               
               

               Alignm length:
               462
               

               Alignm identity:
               328
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 33
               

               Conread position:
               1-456
               

               Cow position:
               
               

               Alignm length:
               459
               

               Alignm identity:
               328
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 15
               

               Conread position:
               1-456
               

               Cow position:
               
               

               Alignm length:
               459
               

               Alignm identity:
               323
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 44
               

               Conread position:
               1-456
               

               Cow position:
               
               

               Alignm length:
               459
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 33
               

               Conread position:
               1-456
               

               Cow position:
               
               

               Alignm length:
               458
               

               Alignm identity:
               309
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 40
               

               Conread position:
               1-456
               

               Cow position:
               
               

               Alignm length:
               457
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 33
               

               Conread position:
               1-456
               

               Cow position:
               
               

               Alignm length:
               463
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 33
               

               Conread position:
               1-456
               

               Cow position:
               
               

               Alignm length:
               469
               

               Alignm identity:
               326
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 151
               

               Conread position:
               1-456
               

               Cow position:
               
               

               Alignm length:
               464
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 49
               

               Conread position:
               1-456
               

               Cow position:
               
               

               Alignm length:
               470
               

               Alignm identity:
               318
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               41, 106
               

               Conread position:
               1-456
               

               Cow position:
               
               

               Alignm length:
               461
               

               Alignm identity:
               309
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               27, 45
               

               Conread position:
               1-594
               

               Cow position:
               
               

               Alignm length:
               603
               

               Alignm identity:
               405
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 58
               

               Conread position:
               2-456
               

               Cow position:
               
               

               Alignm length:
               458
               

               Alignm identity:
               311
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               388, 24
               

               Conread position:
               2-458
               

               Cow position:
               
               

               Alignm length:
               461
               

               Alignm identity:
               306
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               69, 24
               

               Conread position:
               3-344
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               234
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               3-387
               

               Cow position:
               
               

               Alignm length:
               388
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               170, 56
               

               Conread position:
               4-356
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               229
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               69, 40
               

               Conread position:
               5-593
               

               Cow position:
               
               

               Alignm length:
               604
               

               Alignm identity:
               446
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 23
               

               Conread position:
               6-380
               

               Cow position:
               
               

               Alignm length:
               379
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 37
               

               Conread position:
               6-456
               

               Cow position:
               
               

               Alignm length:
               462
               

               Alignm identity:
               330
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 28
               

               Conread position:
               7-456
               

               Cow position:
               
               

               Alignm length:
               462
               

               Alignm identity:
               331
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 27
               

               Conread position:
               7-456
               

               Cow position:
               
               

               Alignm length:
               454
               

               Alignm identity:
               312
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               282, 35
               

               Conread position:
               8-429
               

               Cow position:
               
               

               Alignm length:
               430
               

               Alignm identity:
               301
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 33
               

               Conread position:
               8-436
               

               Cow position:
               
               

               Alignm length:
               433
               

               Alignm identity:
               294
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 26
               

               Conread position:
               8-452
               

               Cow position:
               
               

               Alignm length:
               449
               

               Alignm identity:
               301
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 14
               

               Conread position:
               8-452
               

               Cow position:
               
               

               Alignm length:
               450
               

               Alignm identity:
               308
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 33
               

               Conread position:
               8-454
               

               Cow position:
               
               

               Alignm length:
               454
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 32
               

               Conread position:
               8-456
               

               Cow position:
               
               

               Alignm length:
               457
               

               Alignm identity:
               314
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 35
               

               Conread position:
               8-456
               

               Cow position:
               
               

               Alignm length:
               454
               

               Alignm identity:
               305
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               93, 33
               

               Conread position:
               8-456
               

               Cow position:
               
               

               Alignm length:
               456
               

               Alignm identity:
               315
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 33
               

               Conread position:
               8-456
               

               Cow position:
               
               

               Alignm length:
               458
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 33
               

               Conread position:
               8-456
               

               Cow position:
               
               

               Alignm length:
               460
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 33
               

               Conread position:
               8-456
               

               Cow position:
               
               

               Alignm length:
               455
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 33
               

               Conread position:
               8-594
               

               Cow position:
               
               

               Alignm length:
               603
               

               Alignm identity:
               395
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 39
               

               Conread position:
               9-371
               

               Cow position:
               
               

               Alignm length:
               366
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               226, 32
               

               Conread position:
               9-456
               

               Cow position:
               
               

               Alignm length:
               454
               

               Alignm identity:
               314
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 25
               

               Conread position:
               9-456
               

               Cow position:
               
               

               Alignm length:
               449
               

               Alignm identity:
               311
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               400, 32
               

               Conread position:
               10-456
               

               Cow position:
               
               

               Alignm length:
               450
               

               Alignm identity:
               299
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               286, 31
               

               Conread position:
               10-456
               

               Cow position:
               
               

               Alignm length:
               453
               

               Alignm identity:
               315
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               284, 31
               

               Conread position:
               10-456
               

               Cow position:
               
               

               Alignm length:
               455
               

               Alignm identity:
               314
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 123
               

               Conread position:
               12-429
               

               Cow position:
               
               

               Alignm length:
               423
               

               Alignm identity:
               301
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 33
               

               Conread position:
               12-456
               

               Cow position:
               
               

               Alignm length:
               447
               

               Alignm identity:
               312
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               275, 22
               

               Conread position:
               14-383
               

               Cow position:
               
               

               Alignm length:
               373
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               275, 8
               

               Conread position:
               14-456
               

               Cow position:
               
               

               Alignm length:
               452
               

               Alignm identity:
               187
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               211, 394
               

               Conread position:
               16-337
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               233
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               48, 25
               

               Conread position:
               17-260
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               185
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               50, 25
               

               Conread position:
               17-456
               

               Cow position:
               
               

               Alignm length:
               447
               

               Alignm identity:
               298
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               50, 23
               

               Conread position:
               18-368
               

               Cow position:
               
               

               Alignm length:
               355
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 11
               

               Conread position:
               19-456
               

               Cow position:
               
               

               Alignm length:
               447
               

               Alignm identity:
               314
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 22
               

               Conread position:
               22-386
               

               Cow position:
               
               

               Alignm length:
               376
               

               Alignm identity:
               250
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               116, 19
               

               Conread position:
               24-456
               

               Cow position:
               
               

               Alignm length:
               438
               

               Alignm identity:
               303
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 128
               

               Conread position:
               30-349
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 17
               

               Conread position:
               30-357
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               236
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               37, 103
               

               Conread position:
               30-456
               

               Cow position:
               
               

               Alignm length:
               438
               

               Alignm identity:
               294
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               34, 49
               

               Conread position:
               34-428
               

               Cow position:
               
               

               Alignm length:
               397
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 33
               

               Conread position:
               36-307
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               195
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               28, 99
               

               Conread position:
               36-398
               

               Cow position:
               
               

               Alignm length:
               373
               

               Alignm identity:
               259
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               42, 11
               

               Conread position:
               37-422
               

               Cow position:
               
               

               Alignm length:
               394
               

               Alignm identity:
               274
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               30, 22
               

               Conread position:
               48-452
               

               Cow position:
               
               

               Alignm length:
               414
               

               Alignm identity:
               269
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               19, 65
               

               Conread position:
               56-389
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               239
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               235, 33
               

               Conread position:
               59-452
               

               Cow position:
               
               

               Alignm length:
               401
               

               Alignm identity:
               301
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 78
               

               Conread position:
               63-456
               

               Cow position:
               
               

               Alignm length:
               396
               

               Alignm identity:
               284
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 48
               

               Conread position:
               76-383
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               220
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               209, 56
               

               Conread position:
               95-402
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               231
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               239, 55
               

               Conread position:
               106-456
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               248
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               73, 44
               

               Conread position:
               123-456
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               237
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               166, 27
               

               Conread position:
               124-456
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               233
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               15, 27
               

               Conread position:
               143-450
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               205
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               142, 23
               

               Conread position:
               183-379
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               141
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               104, 11
               

               Conread position:
               186-452
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               208
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               198, 42
               

               Conread position:
               194-387
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               144
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               31, 14
               

               Conread position:
               205-456
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               23, 37
               

               Conread position:
               209-443
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               178
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               100, 33
               

               Conread position:
               209-456
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               175
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               23, 11
               

               Conread position:
               213-456
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               76, 24
               

               Conread position:
               214-456
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               37, 43
               

               Conread position:
               217-456
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               167
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               158, 80
               

               Conread position:
               220-456
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               169
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               49, 125
               

               Conread position:
               257-574
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               231
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               30, 125
               

               Conread position:
               260-443
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               28, 45
               

               Conread position:
               269-456
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               132
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               16, 0
               
Show alignments to all cow chromosomes.