Cow genome map

Conread name: Liv1-LVRM10127A01

Conread position: 1-298
Cow position: chr8:25409051-25409336 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 211
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 66, 46

Conread position: 1-432
Cow position: chr8:8400790-8400366 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 42

Conread position: 1-452
Cow position: chr8:17312352-17312815 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 44

Conread position: 1-452
Cow position: chr8:29007960-29008378 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 44

Conread position: 1-452
Cow position: chr8:33589701-33590142 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 44

Conread position: 1-456
Cow position: chr8:1347930-1347487 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 28

Conread position: 1-456
Cow position: chr8:3855702-3855261 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 42

Conread position: 1-456
Cow position: chr8:4687726-4688164 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 44

Conread position: 1-456
Cow position: chr8:7162220-7162661 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 44

Conread position: 1-456
Cow position: chr8:10742345-10741882 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 44

Conread position: 1-456
Cow position: chr8:19051771-19052215 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 44

Conread position: 1-456
Cow position: chr8:23771964-23772403 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 44

Conread position: 1-456
Cow position: chr8:24915012-24914558 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 28

Conread position: 1-456
Cow position: chr8:25523725-25524155 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 44

Conread position: 1-456
Cow position: chr8:25775349-25774897 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 33

Conread position: 1-456
Cow position: chr8:32318228-32317785 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 15

Conread position: 1-456
Cow position: chr8:36635184-36634746 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 44

Conread position: 1-456
Cow position: chr8:39194891-39194450 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 33

Conread position: 1-456
Cow position: chr8:41644349-41643923 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 40

Conread position: 1-456
Cow position: chr8:42485239-42485674 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 33

Conread position: 1-456
Cow position: chr8:47660996-47660558 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 33

Conread position: 1-456
Cow position: chr8:50929795-50929342 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 151

Conread position: 1-456
Cow position: chr8:50995094-50995550 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 49

Conread position: 1-456
Cow position: chr8:51666499-51666053 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 318
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 41, 106

Conread position: 1-456
Cow position: chr8:53427819-53428250 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 309
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 27, 45

Conread position: 1-594
Cow position: chr8:23135288-23134721 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 58

Conread position: 2-456
Cow position: chr8:42579257-42578826 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 388, 24

Conread position: 2-458
Cow position: chr8:14583653-14583217 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 306
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 69, 24

Conread position: 3-344
Cow position: chr8:5681731-5681411 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 234
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 36, 0

Conread position: 3-387
Cow position: chr8:47674174-47674542 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 170, 56

Conread position: 4-356
Cow position: chr8:21790175-21790512 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 229
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 69, 40

Conread position: 5-593
Cow position: chr8:31984457-31985022 (view UCSC Genome Browser custom track)
Alignm length: 604
Alignm identity: 446
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 23

Conread position: 6-380
Cow position: chr8:54017222-54016859 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 37

Conread position: 6-456
Cow position: chr8:14590572-14590115 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 28

Conread position: 7-456
Cow position: chr8:12450352-12450807 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 27

Conread position: 7-456
Cow position: chr8:42419098-42418675 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 282, 35

Conread position: 8-429
Cow position: chr8:27579725-27580136 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 33

Conread position: 8-436
Cow position: chr8:25377312-25377723 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 26

Conread position: 8-452
Cow position: chr8:2887080-2887512 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 14

Conread position: 8-452
Cow position: chr8:34349001-34349430 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 33

Conread position: 8-454
Cow position: chr8:47075490-47075918 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 32

Conread position: 8-456
Cow position: chr8:9736572-9737012 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 35

Conread position: 8-456
Cow position: chr8:10749692-10750114 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 305
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 93, 33

Conread position: 8-456
Cow position: chr8:14631340-14630900 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 33

Conread position: 8-456
Cow position: chr8:22570979-22570541 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 33

Conread position: 8-456
Cow position: chr8:37932421-37932859 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 33

Conread position: 8-456
Cow position: chr8:47454269-47453835 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 33

Conread position: 8-594
Cow position: chr8:1152972-1152388 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 39

Conread position: 9-371
Cow position: chr8:12801746-12802091 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 226, 32

Conread position: 9-456
Cow position: chr8:42656656-42656228 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 25

Conread position: 9-456
Cow position: chr8:46218408-46217991 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 400, 32

Conread position: 10-456
Cow position: chr8:32041425-32040999 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 299
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 286, 31

Conread position: 10-456
Cow position: chr8:32630698-32630270 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 31

Conread position: 10-456
Cow position: chr8:33325378-33325814 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 123

Conread position: 12-429
Cow position: chr8:46051516-46051922 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 33

Conread position: 12-456
Cow position: chr8:14927546-14927121 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 275, 22

Conread position: 14-383
Cow position: chr8:60061739-60062089 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 275, 8

Conread position: 14-456
Cow position: chr8:39819769-39820215 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 187
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 211, 394

Conread position: 16-337
Cow position: chr8:13491703-13492013 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 233
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 48, 25

Conread position: 17-260
Cow position: chr8:35213197-35213430 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 185
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 50, 25

Conread position: 17-456
Cow position: chr8:32436743-32436316 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 298
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 50, 23

Conread position: 18-368
Cow position: chr8:22128913-22129250 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 11

Conread position: 19-456
Cow position: chr8:21157451-21157026 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 22

Conread position: 22-386
Cow position: chr8:11763275-11763643 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 250
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 116, 19

Conread position: 24-456
Cow position: chr8:2169179-2168757 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 128

Conread position: 30-349
Cow position: chr8:38605859-38605555 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 17

Conread position: 30-357
Cow position: chr8:6064436-6064117 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 236
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 37, 103

Conread position: 30-456
Cow position: chr8:34109227-34109643 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 294
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 34, 49

Conread position: 34-428
Cow position: chr8:58185234-58184858 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 33

Conread position: 36-307
Cow position: chr8:1117876-1118136 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 195
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 28, 99

Conread position: 36-398
Cow position: chr8:2235626-2235266 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 259
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 42, 11

Conread position: 37-422
Cow position: chr8:9061517-9061878 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 274
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 30, 22

Conread position: 48-452
Cow position: chr8:42469031-42469421 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 269
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 19, 65

Conread position: 56-389
Cow position: chr8:49697611-49697291 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 239
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 235, 33

Conread position: 59-452
Cow position: chr8:6726617-6726229 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 78

Conread position: 63-456
Cow position: chr8:55085921-55086293 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 48

Conread position: 76-383
Cow position: chr8:28878411-28878706 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 220
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 209, 56

Conread position: 95-402
Cow position: chr8:31251918-31252204 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 231
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 239, 55

Conread position: 106-456
Cow position: chr8:14256503-14256843 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 248
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 73, 44

Conread position: 123-456
Cow position: chr8:6764847-6764526 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 237
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 166, 27

Conread position: 124-456
Cow position: chr8:38392054-38392390 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 233
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 15, 27

Conread position: 143-450
Cow position: chr8:27727167-27727468 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 205
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 142, 23

Conread position: 183-379
Cow position: chr8:45986805-45986994 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 141
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 104, 11

Conread position: 186-452
Cow position: chr8:18054229-18054485 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 198, 42

Conread position: 194-387
Cow position: chr8:16090358-16090542 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 144
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 31, 14

Conread position: 205-456
Cow position: chr8:14255694-14255946 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 169
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 23, 37

Conread position: 209-443
Cow position: chr8:24871257-24871039 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 178
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 100, 33

Conread position: 209-456
Cow position: chr8:45794236-45793988 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 175
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 23, 11

Conread position: 213-456
Cow position: chr8:59261419-59261181 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 171
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 76, 24

Conread position: 214-456
Cow position: chr8:3748680-3748437 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 175
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 37, 43

Conread position: 217-456
Cow position: chr8:21584712-21584952 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 167
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 158, 80

Conread position: 220-456
Cow position: chr8:11834047-11834289 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 169
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 49, 125

Conread position: 257-574
Cow position: chr8:38576633-38576333 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 231
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 30, 125

Conread position: 260-443
Cow position: chr8:38584553-38584371 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 135
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 28, 45

Conread position: 269-456
Cow position: chr8:12313831-12313640 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 132
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 16, 0

Show alignments to all cow chromosomes.