Cow genome map
Conread name: | Liv1-LVRM10127A01 |
Conread position: | 1-304 |
Cow position: | chr9:28655327-28655613 (view UCSC Genome Browser custom track) |
Alignm length: | 304 |
Alignm identity: | 215 |
Alignm E-value: | 8e-39 |
Alignm gaps (pig, cow): | 31, 0 |
Conread position: | 1-371 |
Cow position: | chr9:10322777-10323136 (view UCSC Genome Browser custom track) |
Alignm length: | 374 |
Alignm identity: | 265 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 66, 44 |
Conread position: | 1-383 |
Cow position: | chr9:44819122-44819486 (view UCSC Genome Browser custom track) |
Alignm length: | 386 |
Alignm identity: | 272 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 64, 42 |
Conread position: | 1-387 |
Cow position: | chr9:8165906-8165529 (view UCSC Genome Browser custom track) |
Alignm length: | 391 |
Alignm identity: | 264 |
Alignm E-value: | 3.99931e-42 |
Alignm gaps (pig, cow): | 284, 25 |
Conread position: | 1-387 |
Cow position: | chr9:50698277-50698649 (view UCSC Genome Browser custom track) |
Alignm length: | 392 |
Alignm identity: | 281 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 63, 40 |
Conread position: | 1-395 |
Cow position: | chr9:16176743-16177109 (view UCSC Genome Browser custom track) |
Alignm length: | 400 |
Alignm identity: | 285 |
Alignm E-value: | 5.60519e-45 |
Alignm gaps (pig, cow): | 66, 33 |
Conread position: | 1-398 |
Cow position: | chr9:4282941-4283342 (view UCSC Genome Browser custom track) |
Alignm length: | 411 |
Alignm identity: | 292 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 62, 40 |
Conread position: | 1-423 |
Cow position: | chr9:25188073-25188480 (view UCSC Genome Browser custom track) |
Alignm length: | 430 |
Alignm identity: | 308 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 67, 132 |
Conread position: | 1-444 |
Cow position: | chr9:3167901-3168312 (view UCSC Genome Browser custom track) |
Alignm length: | 446 |
Alignm identity: | 302 |
Alignm E-value: | 3.00004e-41 |
Alignm gaps (pig, cow): | 35, 104 |
Conread position: | 1-450 |
Cow position: | chr9:24980950-24980528 (view UCSC Genome Browser custom track) |
Alignm length: | 455 |
Alignm identity: | 305 |
Alignm E-value: | 7e-38 |
Alignm gaps (pig, cow): | 75, 40 |
Conread position: | 1-451 |
Cow position: | chr9:1981248-1981671 (view UCSC Genome Browser custom track) |
Alignm length: | 456 |
Alignm identity: | 323 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 68, 33 |
Conread position: | 1-451 |
Cow position: | chr9:59537072-59537511 (view UCSC Genome Browser custom track) |
Alignm length: | 457 |
Alignm identity: | 319 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 231, 33 |
Conread position: | 1-452 |
Cow position: | chr9:5141688-5142109 (view UCSC Genome Browser custom track) |
Alignm length: | 455 |
Alignm identity: | 321 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 62, 33 |
Conread position: | 1-452 |
Cow position: | chr9:6250273-6250713 (view UCSC Genome Browser custom track) |
Alignm length: | 456 |
Alignm identity: | 320 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 66, 44 |
Conread position: | 1-455 |
Cow position: | chr9:3727576-3727998 (view UCSC Genome Browser custom track) |
Alignm length: | 457 |
Alignm identity: | 331 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 41 |
Conread position: | 1-456 |
Cow position: | chr9:2212113-2212556 (view UCSC Genome Browser custom track) |
Alignm length: | 463 |
Alignm identity: | 307 |
Alignm E-value: | 3.9937e-43 |
Alignm gaps (pig, cow): | 65, 14 |
Conread position: | 1-456 |
Cow position: | chr9:2871303-2871749 (view UCSC Genome Browser custom track) |
Alignm length: | 463 |
Alignm identity: | 306 |
Alignm E-value: | 4.06377e-44 |
Alignm gaps (pig, cow): | 148, 40 |
Conread position: | 1-456 |
Cow position: | chr9:3005262-3004828 (view UCSC Genome Browser custom track) |
Alignm length: | 461 |
Alignm identity: | 316 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 66, 42 |
Conread position: | 1-456 |
Cow position: | chr9:4533463-4533910 (view UCSC Genome Browser custom track) |
Alignm length: | 463 |
Alignm identity: | 322 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 47, 154 |
Conread position: | 1-456 |
Cow position: | chr9:17063408-17062968 (view UCSC Genome Browser custom track) |
Alignm length: | 459 |
Alignm identity: | 316 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 66, 40 |
Conread position: | 1-456 |
Cow position: | chr9:18508848-18508410 (view UCSC Genome Browser custom track) |
Alignm length: | 459 |
Alignm identity: | 314 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 66, 44 |
Conread position: | 1-456 |
Cow position: | chr9:19158565-19158117 (view UCSC Genome Browser custom track) |
Alignm length: | 467 |
Alignm identity: | 330 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 66, 44 |
Conread position: | 1-456 |
Cow position: | chr9:20939296-20939727 (view UCSC Genome Browser custom track) |
Alignm length: | 464 |
Alignm identity: | 333 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 66, 25 |
Conread position: | 1-456 |
Cow position: | chr9:21410271-21410723 (view UCSC Genome Browser custom track) |
Alignm length: | 465 |
Alignm identity: | 326 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 66, 44 |
Conread position: | 1-456 |
Cow position: | chr9:22654550-22654995 (view UCSC Genome Browser custom track) |
Alignm length: | 459 |
Alignm identity: | 332 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 66, 49 |
Conread position: | 1-456 |
Cow position: | chr9:27783161-27783601 (view UCSC Genome Browser custom track) |
Alignm length: | 460 |
Alignm identity: | 327 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 20, 45 |
Conread position: | 1-456 |
Cow position: | chr9:31808551-31808991 (view UCSC Genome Browser custom track) |
Alignm length: | 458 |
Alignm identity: | 319 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 66, 44 |
Conread position: | 1-456 |
Cow position: | chr9:32969922-32970359 (view UCSC Genome Browser custom track) |
Alignm length: | 461 |
Alignm identity: | 325 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 66, 42 |
Conread position: | 1-456 |
Cow position: | chr9:51181203-51180763 (view UCSC Genome Browser custom track) |
Alignm length: | 458 |
Alignm identity: | 330 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 66, 44 |
Conread position: | 1-456 |
Cow position: | chr9:59481822-59481381 (view UCSC Genome Browser custom track) |
Alignm length: | 459 |
Alignm identity: | 326 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 67, 41 |
Conread position: | 2-324 |
Cow position: | chr9:29329612-29329917 (view UCSC Genome Browser custom track) |
Alignm length: | 328 |
Alignm identity: | 241 |
Alignm E-value: | 1.00053e-42 |
Alignm gaps (pig, cow): | 65, 10 |
Conread position: | 2-455 |
Cow position: | chr9:651052-650613 (view UCSC Genome Browser custom track) |
Alignm length: | 463 |
Alignm identity: | 324 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 65, 24 |
Conread position: | 2-462 |
Cow position: | chr9:54925529-54925961 (view UCSC Genome Browser custom track) |
Alignm length: | 462 |
Alignm identity: | 315 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 339, 39 |
Conread position: | 3-398 |
Cow position: | chr9:6977307-6977687 (view UCSC Genome Browser custom track) |
Alignm length: | 400 |
Alignm identity: | 270 |
Alignm E-value: | 3e-39 |
Alignm gaps (pig, cow): | 41, 13 |
Conread position: | 4-431 |
Cow position: | chr9:35315902-35315499 (view UCSC Genome Browser custom track) |
Alignm length: | 433 |
Alignm identity: | 293 |
Alignm E-value: | 7e-38 |
Alignm gaps (pig, cow): | 77, 36 |
Conread position: | 4-452 |
Cow position: | chr9:4649621-4649195 (view UCSC Genome Browser custom track) |
Alignm length: | 458 |
Alignm identity: | 321 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 281, 37 |
Conread position: | 6-397 |
Cow position: | chr9:2497998-2497610 (view UCSC Genome Browser custom track) |
Alignm length: | 401 |
Alignm identity: | 270 |
Alignm E-value: | 9.99967e-42 |
Alignm gaps (pig, cow): | 70, 35 |
Conread position: | 6-432 |
Cow position: | chr9:1995411-1994994 (view UCSC Genome Browser custom track) |
Alignm length: | 434 |
Alignm identity: | 313 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 61, 37 |
Conread position: | 6-456 |
Cow position: | chr9:7158968-7158524 (view UCSC Genome Browser custom track) |
Alignm length: | 456 |
Alignm identity: | 312 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 61, 37 |
Conread position: | 6-456 |
Cow position: | chr9:10937574-10938009 (view UCSC Genome Browser custom track) |
Alignm length: | 458 |
Alignm identity: | 327 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 61, 44 |
Conread position: | 6-456 |
Cow position: | chr9:28022785-28023216 (view UCSC Genome Browser custom track) |
Alignm length: | 455 |
Alignm identity: | 311 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 61, 39 |
Conread position: | 7-456 |
Cow position: | chr9:4942827-4942392 (view UCSC Genome Browser custom track) |
Alignm length: | 459 |
Alignm identity: | 323 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 112, 27 |
Conread position: | 7-456 |
Cow position: | chr9:17304996-17304559 (view UCSC Genome Browser custom track) |
Alignm length: | 453 |
Alignm identity: | 321 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 60, 36 |
Conread position: | 7-456 |
Cow position: | chr9:29027231-29026791 (view UCSC Genome Browser custom track) |
Alignm length: | 453 |
Alignm identity: | 313 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 60, 38 |
Conread position: | 7-456 |
Cow position: | chr9:37161833-37161398 (view UCSC Genome Browser custom track) |
Alignm length: | 453 |
Alignm identity: | 329 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 38 |
Conread position: | 7-458 |
Cow position: | chr9:828127-827691 (view UCSC Genome Browser custom track) |
Alignm length: | 457 |
Alignm identity: | 319 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 60, 21 |
Conread position: | 8-342 |
Cow position: | chr9:8284091-8283769 (view UCSC Genome Browser custom track) |
Alignm length: | 339 |
Alignm identity: | 229 |
Alignm E-value: | 1e-32 |
Alignm gaps (pig, cow): | 17, 115 |
Conread position: | 8-437 |
Cow position: | chr9:46859481-46859062 (view UCSC Genome Browser custom track) |
Alignm length: | 438 |
Alignm identity: | 311 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 59, 33 |
Conread position: | 8-456 |
Cow position: | chr9:30827718-30828157 (view UCSC Genome Browser custom track) |
Alignm length: | 454 |
Alignm identity: | 313 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 59, 26 |
Conread position: | 8-456 |
Cow position: | chr9:50791694-50792129 (view UCSC Genome Browser custom track) |
Alignm length: | 457 |
Alignm identity: | 314 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 59, 33 |
Conread position: | 8-456 |
Cow position: | chr9:51211662-51212099 (view UCSC Genome Browser custom track) |
Alignm length: | 457 |
Alignm identity: | 320 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 59, 33 |
Conread position: | 10-456 |
Cow position: | chr9:47042942-47043376 (view UCSC Genome Browser custom track) |
Alignm length: | 457 |
Alignm identity: | 313 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 57, 31 |
Conread position: | 12-456 |
Cow position: | chr9:5004957-5005401 (view UCSC Genome Browser custom track) |
Alignm length: | 452 |
Alignm identity: | 320 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 185, 40 |
Conread position: | 12-456 |
Cow position: | chr9:42310664-42311094 (view UCSC Genome Browser custom track) |
Alignm length: | 448 |
Alignm identity: | 313 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 55, 10 |
Conread position: | 14-455 |
Cow position: | chr9:7003715-7004146 (view UCSC Genome Browser custom track) |
Alignm length: | 447 |
Alignm identity: | 254 |
Alignm E-value: | 8e-29 |
Alignm gaps (pig, cow): | 70, 31 |
Conread position: | 16-452 |
Cow position: | chr9:30673360-30673791 (view UCSC Genome Browser custom track) |
Alignm length: | 448 |
Alignm identity: | 318 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 32, 138 |
Conread position: | 17-437 |
Cow position: | chr9:1251010-1250600 (view UCSC Genome Browser custom track) |
Alignm length: | 426 |
Alignm identity: | 291 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 50, 24 |
Conread position: | 17-456 |
Cow position: | chr9:779831-779403 (view UCSC Genome Browser custom track) |
Alignm length: | 453 |
Alignm identity: | 309 |
Alignm E-value: | 9.99995e-41 |
Alignm gaps (pig, cow): | 50, 24 |
Conread position: | 17-456 |
Cow position: | chr9:3309617-3310030 (view UCSC Genome Browser custom track) |
Alignm length: | 444 |
Alignm identity: | 306 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 277, 24 |
Conread position: | 17-456 |
Cow position: | chr9:44384250-44384679 (view UCSC Genome Browser custom track) |
Alignm length: | 445 |
Alignm identity: | 311 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 50, 24 |
Conread position: | 18-452 |
Cow position: | chr9:31065709-31066130 (view UCSC Genome Browser custom track) |
Alignm length: | 444 |
Alignm identity: | 310 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 23 |
Conread position: | 21-456 |
Cow position: | chr9:59447513-59447924 (view UCSC Genome Browser custom track) |
Alignm length: | 438 |
Alignm identity: | 257 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 268, 31 |
Conread position: | 28-389 |
Cow position: | chr9:59428010-59428356 (view UCSC Genome Browser custom track) |
Alignm length: | 366 |
Alignm identity: | 255 |
Alignm E-value: | 3.9937e-43 |
Alignm gaps (pig, cow): | 36, 90 |
Conread position: | 28-456 |
Cow position: | chr9:47003184-47003593 (view UCSC Genome Browser custom track) |
Alignm length: | 432 |
Alignm identity: | 302 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 26, 125 |
Conread position: | 30-373 |
Cow position: | chr9:3543852-3544216 (view UCSC Genome Browser custom track) |
Alignm length: | 367 |
Alignm identity: | 251 |
Alignm E-value: | 2e-38 |
Alignm gaps (pig, cow): | 37, 138 |
Conread position: | 52-371 |
Cow position: | chr9:21110561-21110870 (view UCSC Genome Browser custom track) |
Alignm length: | 324 |
Alignm identity: | 215 |
Alignm E-value: | 6e-26 |
Alignm gaps (pig, cow): | 238, 41 |
Conread position: | 54-456 |
Cow position: | chr9:38677170-38677560 (view UCSC Genome Browser custom track) |
Alignm length: | 407 |
Alignm identity: | 291 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 13, 97 |
Conread position: | 67-387 |
Cow position: | chr9:4836301-4835992 (view UCSC Genome Browser custom track) |
Alignm length: | 322 |
Alignm identity: | 248 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 150, 83 |
Conread position: | 76-456 |
Cow position: | chr9:25034515-25034145 (view UCSC Genome Browser custom track) |
Alignm length: | 388 |
Alignm identity: | 273 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 63, 56 |
Conread position: | 88-395 |
Cow position: | chr9:17901502-17901209 (view UCSC Genome Browser custom track) |
Alignm length: | 312 |
Alignm identity: | 215 |
Alignm E-value: | 1e-31 |
Alignm gaps (pig, cow): | 41, 13 |
Conread position: | 92-500 |
Cow position: | chr9:20176651-20176249 (view UCSC Genome Browser custom track) |
Alignm length: | 418 |
Alignm identity: | 295 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 100 |
Conread position: | 96-403 |
Cow position: | chr9:8402439-8402731 (view UCSC Genome Browser custom track) |
Alignm length: | 309 |
Alignm identity: | 220 |
Alignm E-value: | 3e-39 |
Alignm gaps (pig, cow): | 102, 44 |
Conread position: | 97-456 |
Cow position: | chr9:35595009-35594667 (view UCSC Genome Browser custom track) |
Alignm length: | 360 |
Alignm identity: | 249 |
Alignm E-value: | 1.00053e-42 |
Alignm gaps (pig, cow): | 52, 0 |
Conread position: | 116-437 |
Cow position: | chr9:30191294-30190991 (view UCSC Genome Browser custom track) |
Alignm length: | 323 |
Alignm identity: | 230 |
Alignm E-value: | 3.99931e-42 |
Alignm gaps (pig, cow): | 22, 16 |
Conread position: | 118-456 |
Cow position: | chr9:2679360-2679683 (view UCSC Genome Browser custom track) |
Alignm length: | 344 |
Alignm identity: | 234 |
Alignm E-value: | 1e-31 |
Alignm gaps (pig, cow): | 120, 18 |
Conread position: | 138-456 |
Cow position: | chr9:27036017-27036318 (view UCSC Genome Browser custom track) |
Alignm length: | 319 |
Alignm identity: | 208 |
Alignm E-value: | 5e-24 |
Alignm gaps (pig, cow): | 12, 0 |
Conread position: | 145-432 |
Cow position: | chr9:34724628-34724899 (view UCSC Genome Browser custom track) |
Alignm length: | 289 |
Alignm identity: | 192 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 261, 47 |
Conread position: | 146-456 |
Cow position: | chr9:7105312-7105012 (view UCSC Genome Browser custom track) |
Alignm length: | 318 |
Alignm identity: | 218 |
Alignm E-value: | 8e-29 |
Alignm gaps (pig, cow): | 33, 38 |
Conread position: | 161-451 |
Cow position: | chr9:3224513-3224229 (view UCSC Genome Browser custom track) |
Alignm length: | 297 |
Alignm identity: | 206 |
Alignm E-value: | 1e-30 |
Alignm gaps (pig, cow): | 24, 9 |
Conread position: | 200-456 |
Cow position: | chr9:12912939-12913194 (view UCSC Genome Browser custom track) |
Alignm length: | 261 |
Alignm identity: | 179 |
Alignm E-value: | 3e-29 |
Alignm gaps (pig, cow): | 89, 24 |
Conread position: | 203-453 |
Cow position: | chr9:42185955-42185716 (view UCSC Genome Browser custom track) |
Alignm length: | 254 |
Alignm identity: | 176 |
Alignm E-value: | 5e-25 |
Alignm gaps (pig, cow): | 5, 156 |
Conread position: | 205-456 |
Cow position: | chr9:45874688-45874933 (view UCSC Genome Browser custom track) |
Alignm length: | 256 |
Alignm identity: | 178 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 20, 12 |
Conread position: | 205-456 |
Cow position: | chr9:50094076-50093821 (view UCSC Genome Browser custom track) |
Alignm length: | 261 |
Alignm identity: | 190 |
Alignm E-value: | 6e-36 |
Alignm gaps (pig, cow): | 20, 203 |
Conread position: | 209-452 |
Cow position: | chr9:26567772-26568015 (view UCSC Genome Browser custom track) |
Alignm length: | 251 |
Alignm identity: | 176 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 6, 60 |
Conread position: | 211-456 |
Cow position: | chr9:9562873-9562634 (view UCSC Genome Browser custom track) |
Alignm length: | 248 |
Alignm identity: | 173 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 77, 118 |
Conread position: | 214-456 |
Cow position: | chr9:1638033-1638270 (view UCSC Genome Browser custom track) |
Alignm length: | 245 |
Alignm identity: | 166 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 142, 132 |
Conread position: | 241-456 |
Cow position: | chr9:8781708-8781493 (view UCSC Genome Browser custom track) |
Alignm length: | 222 |
Alignm identity: | 160 |
Alignm E-value: | 7e-28 |
Alignm gaps (pig, cow): | 54, 20 |
Conread position: | 270-456 |
Cow position: | chr9:64015441-64015254 (view UCSC Genome Browser custom track) |
Alignm length: | 193 |
Alignm identity: | 142 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 26, 135 |
Conread position: | 290-456 |
Cow position: | chr9:26737165-26737326 (view UCSC Genome Browser custom track) |
Alignm length: | 168 |
Alignm identity: | 122 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 99, 9 |
Show alignments to all cow chromosomes.