Cow genome map
| Conread name: | Liv1-LVRM10127A01 |
| Conread position: | 1-271 |
| Cow position: | chrX:23132848-23133104 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 195 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 66, 40 |
| Conread position: | 1-316 |
| Cow position: | chrX:10416574-10416269 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 161 |
| Conread position: | 1-371 |
| Cow position: | chrX:13082133-13081771 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 260 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 63, 79 |
| Conread position: | 1-383 |
| Cow position: | chrX:34219191-34219549 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 272 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 65, 134 |
| Conread position: | 1-387 |
| Cow position: | chrX:18553310-18553677 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 261 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 77, 46 |
| Conread position: | 1-397 |
| Cow position: | chrX:27961739-27962123 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 40 |
| Conread position: | 1-397 |
| Cow position: | chrX:29885869-29886258 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 149 |
| Conread position: | 1-424 |
| Cow position: | chrX:35940369-35939985 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 267, 40 |
| Conread position: | 1-428 |
| Cow position: | chrX:21269175-21268754 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 311 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 62, 40 |
| Conread position: | 1-429 |
| Cow position: | chrX:10385186-10385588 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 303 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 63, 37 |
| Conread position: | 1-431 |
| Cow position: | chrX:13182245-13181855 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 39 |
| Conread position: | 1-432 |
| Cow position: | chrX:41102585-41102171 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 306 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 66, 28 |
| Conread position: | 1-450 |
| Cow position: | chrX:28868365-28867929 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 40 |
| Conread position: | 1-452 |
| Cow position: | chrX:18242049-18242470 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 297 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 240, 41 |
| Conread position: | 1-456 |
| Cow position: | chrX:971663-972091 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 388, 44 |
| Conread position: | 1-456 |
| Cow position: | chrX:1547859-1548302 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 33 |
| Conread position: | 1-456 |
| Cow position: | chrX:2481751-2481307 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 44 |
| Conread position: | 1-456 |
| Cow position: | chrX:7031343-7031789 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 40 |
| Conread position: | 1-456 |
| Cow position: | chrX:13075816-13075376 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 309 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 66, 40 |
| Conread position: | 1-456 |
| Cow position: | chrX:15126349-15125907 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 152 |
| Conread position: | 1-456 |
| Cow position: | chrX:17666904-17666471 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 40 |
| Conread position: | 1-456 |
| Cow position: | chrX:18952801-18952355 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 44 |
| Conread position: | 1-456 |
| Cow position: | chrX:21580346-21580808 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 44 |
| Conread position: | 1-456 |
| Cow position: | chrX:21830410-21830835 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 44 |
| Conread position: | 1-456 |
| Cow position: | chrX:22489023-22489479 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 158 |
| Conread position: | 1-456 |
| Cow position: | chrX:23277907-23278346 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 172, 49 |
| Conread position: | 1-456 |
| Cow position: | chrX:23389635-23389196 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 288, 33 |
| Conread position: | 1-456 |
| Cow position: | chrX:23455137-23454696 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 33 |
| Conread position: | 1-456 |
| Cow position: | chrX:26757734-26757308 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 33 |
| Conread position: | 1-456 |
| Cow position: | chrX:27316156-27316601 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 44 |
| Conread position: | 1-456 |
| Cow position: | chrX:27593107-27592663 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 150 |
| Conread position: | 1-456 |
| Cow position: | chrX:29097076-29097519 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 44 |
| Conread position: | 1-456 |
| Cow position: | chrX:30138696-30138254 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 25 |
| Conread position: | 1-456 |
| Cow position: | chrX:30170950-30170527 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 1-456 |
| Cow position: | chrX:30231216-30230777 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 67 |
| Conread position: | 1-456 |
| Cow position: | chrX:36136672-36136241 (view UCSC Genome Browser custom track) |
| Alignm length: | 465 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 33 |
| Conread position: | 1-456 |
| Cow position: | chrX:44388644-44389087 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 31 |
| Conread position: | 1-456 |
| Cow position: | chrX:45377220-45376769 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 40 |
| Conread position: | 1-590 |
| Cow position: | chrX:41888115-41887559 (view UCSC Genome Browser custom track) |
| Alignm length: | 596 |
| Alignm identity: | 440 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 40 |
| Conread position: | 2-402 |
| Cow position: | chrX:20798202-20798581 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 39 |
| Conread position: | 2-456 |
| Cow position: | chrX:35386298-35385888 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 303 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 269, 32 |
| Conread position: | 3-420 |
| Cow position: | chrX:19726114-19725696 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 283 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 64, 37 |
| Conread position: | 3-425 |
| Cow position: | chrX:15118187-15117789 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 282 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 71, 41 |
| Conread position: | 3-434 |
| Cow position: | chrX:24523629-24524060 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 292 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 33, 11 |
| Conread position: | 3-494 |
| Cow position: | chrX:3626362-3626817 (view UCSC Genome Browser custom track) |
| Alignm length: | 497 |
| Alignm identity: | 321 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 63, 38 |
| Conread position: | 4-349 |
| Cow position: | chrX:8574607-8574278 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 37 |
| Conread position: | 4-387 |
| Cow position: | chrX:19875395-19875766 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 276 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 63, 37 |
| Conread position: | 5-321 |
| Cow position: | chrX:4411532-4411839 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 222 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 63, 36 |
| Conread position: | 6-452 |
| Cow position: | chrX:30057938-30058367 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 296 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 61, 32 |
| Conread position: | 6-456 |
| Cow position: | chrX:26528861-26529287 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 28 |
| Conread position: | 6-456 |
| Cow position: | chrX:31199447-31199881 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 39 |
| Conread position: | 6-460 |
| Cow position: | chrX:30183051-30182602 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 283, 39 |
| Conread position: | 7-428 |
| Cow position: | chrX:27495567-27496009 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 305 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 64, 144 |
| Conread position: | 7-452 |
| Cow position: | chrX:15600047-15600464 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 45 |
| Conread position: | 7-456 |
| Cow position: | chrX:8589049-8589486 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 22 |
| Conread position: | 7-462 |
| Cow position: | chrX:4752740-4752303 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 34 |
| Conread position: | 8-372 |
| Cow position: | chrX:5864281-5864636 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 259 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 59, 33 |
| Conread position: | 8-388 |
| Cow position: | chrX:8610813-8610447 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 26 |
| Conread position: | 8-433 |
| Cow position: | chrX:12287516-12287103 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 35 |
| Conread position: | 8-437 |
| Cow position: | chrX:17477537-17477118 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 33 |
| Conread position: | 8-437 |
| Cow position: | chrX:28626740-28626317 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 294 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 59, 18 |
| Conread position: | 8-452 |
| Cow position: | chrX:28585867-28586300 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 33 |
| Conread position: | 8-452 |
| Cow position: | chrX:37015010-37015435 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 35 |
| Conread position: | 8-456 |
| Cow position: | chrX:2561972-2561537 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 305 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 59, 33 |
| Conread position: | 8-456 |
| Cow position: | chrX:2577313-2577747 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 33 |
| Conread position: | 8-456 |
| Cow position: | chrX:2815594-2815160 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 33 |
| Conread position: | 8-456 |
| Cow position: | chrX:2858488-2858054 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 33 |
| Conread position: | 8-456 |
| Cow position: | chrX:6872183-6871752 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 26 |
| Conread position: | 8-456 |
| Cow position: | chrX:8962686-8962250 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 312 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 59, 33 |
| Conread position: | 8-456 |
| Cow position: | chrX:11148448-11148011 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 35 |
| Conread position: | 8-456 |
| Cow position: | chrX:11422758-11423194 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 33 |
| Conread position: | 8-456 |
| Cow position: | chrX:12354123-12354560 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 25 |
| Conread position: | 8-456 |
| Cow position: | chrX:12702816-12702381 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 33 |
| Conread position: | 8-456 |
| Cow position: | chrX:13096372-13095937 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 307 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 59, 33 |
| Conread position: | 8-456 |
| Cow position: | chrX:13397331-13396894 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 24 |
| Conread position: | 8-456 |
| Cow position: | chrX:15980071-15979634 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 33 |
| Conread position: | 8-456 |
| Cow position: | chrX:16463428-16462995 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 33 |
| Conread position: | 8-456 |
| Cow position: | chrX:24324686-24324242 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 307 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 59, 33 |
| Conread position: | 8-456 |
| Cow position: | chrX:27425438-27424999 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 33 |
| Conread position: | 8-456 |
| Cow position: | chrX:27619246-27618808 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 33 |
| Conread position: | 8-456 |
| Cow position: | chrX:29172875-29172443 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 308 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 59, 33 |
| Conread position: | 8-456 |
| Cow position: | chrX:29910542-29910104 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 33 |
| Conread position: | 8-456 |
| Cow position: | chrX:30011886-30012322 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 302 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 59, 33 |
| Conread position: | 8-550 |
| Cow position: | chrX:5335598-5335050 (view UCSC Genome Browser custom track) |
| Alignm length: | 564 |
| Alignm identity: | 388 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 33 |
| Conread position: | 9-502 |
| Cow position: | chrX:24134371-24133909 (view UCSC Genome Browser custom track) |
| Alignm length: | 498 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 32 |
| Conread position: | 10-452 |
| Cow position: | chrX:28561003-28560571 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 301 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 57, 31 |
| Conread position: | 11-456 |
| Cow position: | chrX:1834709-1835136 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 18 |
| Conread position: | 12-437 |
| Cow position: | chrX:28650661-28650247 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 22 |
| Conread position: | 14-456 |
| Cow position: | chrX:7752794-7753231 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 14 |
| Conread position: | 14-456 |
| Cow position: | chrX:9009232-9009662 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 27 |
| Conread position: | 16-413 |
| Cow position: | chrX:26578569-26578951 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 269 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 41, 17 |
| Conread position: | 16-456 |
| Cow position: | chrX:3084242-3083814 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 27 |
| Conread position: | 16-456 |
| Cow position: | chrX:16811548-16811122 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 18 |
| Conread position: | 16-458 |
| Cow position: | chrX:5322830-5322402 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 26 |
| Conread position: | 17-380 |
| Cow position: | chrX:7482530-7482882 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 27 |
| Conread position: | 17-452 |
| Cow position: | chrX:37813050-37813471 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 24 |
| Conread position: | 17-454 |
| Cow position: | chrX:674306-673884 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 24 |
| Conread position: | 17-456 |
| Cow position: | chrX:3375012-3374586 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 24 |
| Conread position: | 17-456 |
| Cow position: | chrX:12480890-12481320 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 26 |
| Conread position: | 17-456 |
| Cow position: | chrX:14595744-14596170 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 24 |
| Conread position: | 17-456 |
| Cow position: | chrX:30201835-30201414 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 26 |
| Conread position: | 17-456 |
| Cow position: | chrX:35530749-35531178 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 24 |
| Conread position: | 17-462 |
| Cow position: | chrX:3467750-3467315 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 17 |
| Conread position: | 18-345 |
| Cow position: | chrX:29778613-29778301 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 225 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 49, 23 |
| Conread position: | 19-290 |
| Cow position: | chrX:22618411-22618151 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 200 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 48, 22 |
| Conread position: | 20-391 |
| Cow position: | chrX:5308840-5308491 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 240 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 269, 21 |
| Conread position: | 22-428 |
| Cow position: | chrX:20695916-20695532 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 262 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 45, 52 |
| Conread position: | 23-456 |
| Cow position: | chrX:21644006-21643579 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 297 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 34, 114 |
| Conread position: | 24-446 |
| Cow position: | chrX:27390298-27389888 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 283 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 44, 85 |
| Conread position: | 27-456 |
| Cow position: | chrX:21491061-21491482 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 200, 36 |
| Conread position: | 28-386 |
| Cow position: | chrX:15486862-15486525 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 86 |
| Conread position: | 28-450 |
| Cow position: | chrX:26426673-26426277 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 17 |
| Conread position: | 34-456 |
| Cow position: | chrX:28521683-28521282 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 117 |
| Conread position: | 38-465 |
| Cow position: | chrX:46235659-46236075 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 115 |
| Conread position: | 44-456 |
| Cow position: | chrX:27083889-27084291 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 107 |
| Conread position: | 53-456 |
| Cow position: | chrX:18451910-18452304 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 98 |
| Conread position: | 63-430 |
| Cow position: | chrX:47396590-47396234 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 258 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 6, 15 |
| Conread position: | 67-396 |
| Cow position: | chrX:17609378-17609053 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 224 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 25, 84 |
| Conread position: | 73-430 |
| Cow position: | chrX:2535117-2534770 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 221, 77 |
| Conread position: | 75-456 |
| Cow position: | chrX:5356869-5356502 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 213, 75 |
| Conread position: | 77-445 |
| Cow position: | chrX:3621259-3621620 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 74 |
| Conread position: | 82-456 |
| Cow position: | chrX:24771902-24771539 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 267 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 143, 68 |
| Conread position: | 112-456 |
| Cow position: | chrX:20035412-20035077 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 245 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 7, 39 |
| Conread position: | 112-456 |
| Cow position: | chrX:26399138-26398803 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 242 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 7, 51 |
| Conread position: | 117-450 |
| Cow position: | chrX:16684841-16684519 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 233 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 63, 33 |
| Conread position: | 117-456 |
| Cow position: | chrX:13447831-13447503 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 244 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 22, 15 |
| Conread position: | 175-458 |
| Cow position: | chrX:23072212-23072487 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 191 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 110, 25 |
| Conread position: | 186-456 |
| Cow position: | chrX:21753376-21753115 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 190 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 103, 16 |
| Conread position: | 186-456 |
| Cow position: | chrX:32123113-32123379 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 41, 18 |
| Conread position: | 189-396 |
| Cow position: | chrX:24112462-24112249 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 151 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 96, 162 |
| Conread position: | 194-456 |
| Cow position: | chrX:28506213-28505946 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 191 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 11, 67 |
| Conread position: | 194-456 |
| Cow position: | chrX:28757589-28757321 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 11, 218 |
| Conread position: | 202-397 |
| Cow position: | chrX:8938694-8938492 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 25, 194 |
| Conread position: | 205-428 |
| Cow position: | chrX:39694716-39694942 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 20, 207 |
| Conread position: | 205-594 |
| Cow position: | chrX:4330228-4329855 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 262 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 19, 48 |
| Conread position: | 208-433 |
| Cow position: | chrX:22567183-22566954 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 166 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 17, 205 |
| Conread position: | 209-456 |
| Cow position: | chrX:22816912-22817162 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 6, 193 |
| Conread position: | 211-452 |
| Cow position: | chrX:12284019-12284254 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 179 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 83, 30 |
| Conread position: | 213-452 |
| Cow position: | chrX:36251236-36250995 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 74, 124 |
| Conread position: | 221-432 |
| Cow position: | chrX:23343533-23343317 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 76, 199 |
| Conread position: | 226-452 |
| Cow position: | chrX:31510719-31510937 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 231-451 |
| Cow position: | chrX:16700797-16701013 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 40, 56 |
| Conread position: | 240-460 |
| Cow position: | chrX:25071373-25071154 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 152 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 50, 154 |
| Conread position: | 254-550 |
| Cow position: | chrX:23133310-23133608 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 173 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 26, 156 |
| Conread position: | 255-456 |
| Cow position: | chrX:20333440-20333238 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 41, 150 |
| Conread position: | 256-456 |
| Cow position: | chrX:20019004-20019205 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 39, 149 |
| Conread position: | 271-456 |
| Cow position: | chrX:5393710-5393524 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 140 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 23, 134 |
| Conread position: | 280-456 |
| Cow position: | chrX:37850277-37850454 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 132 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 14, 125 |
| Conread position: | 290-456 |
| Cow position: | chrX:37957897-37957732 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 85, 113 |
| Conread position: | 292-595 |
| Cow position: | chrX:10415010-10414699 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 203 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 11, 178 |
| Conread position: | 297-595 |
| Cow position: | chrX:6249407-6249110 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 213 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 23, 117 |
Show alignments to all cow chromosomes.