Cow genome map
| Conread name: | Liv1-LVRM10155E11 |
| Conread position: | 1-309 |
| Cow position: | chr1:98789463-98789153 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 94 |
| Conread position: | 1-317 |
| Cow position: | chr1:12885255-12885570 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 223 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 87, 47 |
| Conread position: | 1-325 |
| Cow position: | chr1:54477415-54477076 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 233 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 43, 145 |
| Conread position: | 1-325 |
| Cow position: | chr1:90622619-90622941 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 233 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 67, 26 |
| Conread position: | 1-333 |
| Cow position: | chr1:10005381-10005711 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 33 |
| Conread position: | 1-349 |
| Cow position: | chr1:71045118-71044769 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 247 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 66, 199 |
| Conread position: | 1-349 |
| Cow position: | chr1:92196587-92196239 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 99 |
| Conread position: | 1-355 |
| Cow position: | chr1:42875046-42875400 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 206 |
| Conread position: | 1-356 |
| Cow position: | chr1:2764744-2764371 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 262 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 67, 288 |
| Conread position: | 1-357 |
| Cow position: | chr1:7739339-7738968 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 251 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 71, 195 |
| Conread position: | 1-357 |
| Cow position: | chr1:24581005-24580660 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 240 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 170, 24 |
| Conread position: | 1-357 |
| Cow position: | chr1:68812315-68812664 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 100 |
| Conread position: | 1-357 |
| Cow position: | chr1:68951013-68950661 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 60 |
| Conread position: | 1-357 |
| Cow position: | chr1:76860413-76860766 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 227 |
| Conread position: | 1-363 |
| Cow position: | chr1:54163487-54163837 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 76 |
| Conread position: | 1-364 |
| Cow position: | chr1:81925572-81925935 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 258 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 116, 90 |
| Conread position: | 1-382 |
| Cow position: | chr1:9512761-9513144 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 269 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 72, 64 |
| Conread position: | 1-385 |
| Cow position: | chr1:71691167-71690779 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 103 |
| Conread position: | 1-392 |
| Cow position: | chr1:19145547-19145950 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 278 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 96, 202 |
| Conread position: | 1-392 |
| Cow position: | chr1:21577165-21576759 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 263 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 66, 15 |
| Conread position: | 1-392 |
| Cow position: | chr1:24780868-24781261 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 260 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 46, 33 |
| Conread position: | 1-392 |
| Cow position: | chr1:26446761-26446373 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 165, 88 |
| Conread position: | 1-392 |
| Cow position: | chr1:28677659-28677275 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 60 |
| Conread position: | 1-392 |
| Cow position: | chr1:30495168-30494785 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 279 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 46, 99 |
| Conread position: | 1-393 |
| Cow position: | chr1:70534835-70535247 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 343 |
| Conread position: | 1-393 |
| Cow position: | chr1:102784141-102783755 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 271 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 88, 164 |
| Conread position: | 2-364 |
| Cow position: | chr1:85142602-85142976 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 337 |
| Conread position: | 2-392 |
| Cow position: | chr1:53520263-53519881 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 271 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 164, 35 |
| Conread position: | 2-392 |
| Cow position: | chr1:58439685-58440080 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 264 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 50, 98 |
| Conread position: | 3-357 |
| Cow position: | chr1:52054432-52054074 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 272 |
| Conread position: | 5-347 |
| Cow position: | chr1:44127243-44127577 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 232 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 161, 83 |
| Conread position: | 19-375 |
| Cow position: | chr1:71016770-71017111 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 238 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 17, 62 |
| Conread position: | 31-328 |
| Cow position: | chr1:102775578-102775877 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 201 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 65, 200 |
| Conread position: | 46-357 |
| Cow position: | chr1:6240716-6241019 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 51 |
| Conread position: | 46-357 |
| Cow position: | chr1:46839344-46839043 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 224 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 15, 45 |
| Conread position: | 60-342 |
| Cow position: | chr1:57671254-57671544 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 208 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 66-357 |
| Cow position: | chr1:68818362-68818655 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 197 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 30, 76 |
| Conread position: | 69-349 |
| Cow position: | chr1:43567967-43568248 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 13 |
| Conread position: | 86-306 |
| Cow position: | chr1:66685008-66685231 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 161 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 97-351 |
| Cow position: | chr1:82518614-82518868 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 183 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 74, 33 |
| Conread position: | 152-383 |
| Cow position: | chr1:31190968-31191199 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 28, 44 |
Show alignments to all cow chromosomes.