Cow genome map
| Conread name: | Liv1-LVRM10158G02 |
| Conread position: | 233-596 |
| Cow position: | chr10:25639019-25639357 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 205 |
| Conread position: | 243-495 |
| Cow position: | chr10:27773748-27773997 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 188 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 244-495 |
| Cow position: | chr10:32746531-32746777 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 186 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 245-590 |
| Cow position: | chr10:37052228-37052574 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 245 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 11, 269 |
| Conread position: | 246-594 |
| Cow position: | chr10:6228938-6229269 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 38 |
| Conread position: | 247-502 |
| Cow position: | chr10:46749524-46749267 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 186 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 6, 0 |
| Conread position: | 247-596 |
| Cow position: | chr10:53108326-53108653 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 239 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 104, 0 |
| Conread position: | 253-495 |
| Cow position: | chr10:4541770-4542006 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 169 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 46, 117 |
| Conread position: | 254-495 |
| Cow position: | chr10:14425316-14425557 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 181 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 256-413 |
| Cow position: | chr10:15438626-15438783 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 111 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 259-495 |
| Cow position: | chr10:13339442-13339676 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 174 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 259-495 |
| Cow position: | chr10:21669013-21669247 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 168 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 259-495 |
| Cow position: | chr10:33154998-33155234 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 174 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 259-495 |
| Cow position: | chr10:33715852-33716074 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 167 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 259-495 |
| Cow position: | chr10:53976528-53976763 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 177 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 215, 0 |
| Conread position: | 259-502 |
| Cow position: | chr10:14643488-14643722 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 237, 36 |
| Conread position: | 259-594 |
| Cow position: | chr10:6603771-6603458 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 243 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 277, 42 |
| Conread position: | 259-643 |
| Cow position: | chr10:57426310-57426679 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 87 |
| Conread position: | 260-593 |
| Cow position: | chr10:33481654-33481345 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 240 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 178, 0 |
| Conread position: | 260-639 |
| Cow position: | chr10:52418914-52419283 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 109, 248 |
| Conread position: | 261-494 |
| Cow position: | chr10:69647159-69646929 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 264-491 |
| Cow position: | chr10:69233974-69234194 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 8, 57 |
| Conread position: | 267-593 |
| Cow position: | chr10:44316496-44316820 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 238, 40 |
| Conread position: | 268-480 |
| Cow position: | chr10:30427800-30428004 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 157 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 268-490 |
| Cow position: | chr10:18044240-18044021 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 162 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 107, 0 |
| Conread position: | 268-495 |
| Cow position: | chr10:15173234-15173010 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 173 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 268-495 |
| Cow position: | chr10:15394961-15395188 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 171 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 91, 36 |
| Conread position: | 268-495 |
| Cow position: | chr10:32880662-32880889 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 174 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 268-495 |
| Cow position: | chr10:34165240-34165467 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 175 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 268-495 |
| Cow position: | chr10:50577266-50577494 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 174 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 268-502 |
| Cow position: | chr10:19974533-19974306 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 175 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 101, 113 |
| Conread position: | 268-593 |
| Cow position: | chr10:33845591-33845895 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 27 |
| Conread position: | 268-594 |
| Cow position: | chr10:19972180-19972484 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 229 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 163, 24 |
| Conread position: | 268-596 |
| Cow position: | chr10:36757825-36758134 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 268-596 |
| Cow position: | chr10:52671081-52671391 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 180, 187 |
| Conread position: | 268-628 |
| Cow position: | chr10:28227936-28228291 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 267, 25 |
| Conread position: | 268-635 |
| Cow position: | chr10:10346414-10346777 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 262 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 101, 28 |
| Conread position: | 268-635 |
| Cow position: | chr10:66618160-66618511 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 255 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 330, 54 |
| Conread position: | 268-635 |
| Cow position: | chr10:68822399-68822051 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 259 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 90, 172 |
| Conread position: | 268-639 |
| Cow position: | chr10:52426139-52426506 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 96 |
| Conread position: | 269-495 |
| Cow position: | chr10:53484715-53484940 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 161 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 269-639 |
| Cow position: | chr10:27376105-27375739 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 266, 241 |
| Conread position: | 271-602 |
| Cow position: | chr10:55346570-55346260 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 225 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 88, 14 |
| Conread position: | 297-635 |
| Cow position: | chr10:17857205-17856888 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 237 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 199, 36 |
| Conread position: | 298-590 |
| Cow position: | chr10:25943597-25943871 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 211 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 199, 0 |
| Conread position: | 301-636 |
| Cow position: | chr10:10110303-10110634 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 226 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 195, 46 |
| Conread position: | 318-595 |
| Cow position: | chr10:44981681-44981401 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 201 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 50, 27 |
| Conread position: | 340-589 |
| Cow position: | chr10:59336387-59336616 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 182 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 73, 0 |
Show alignments to all cow chromosomes.