Cow genome map
| Conread name: | Liv1-LVRM10158G02 |
| Conread position: | 227-590 |
| Cow position: | chr11:13615946-13616290 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 20 |
| Conread position: | 244-498 |
| Cow position: | chr11:39996467-39996708 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 107, 15 |
| Conread position: | 246-495 |
| Cow position: | chr11:32266134-32266383 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 186 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 249-594 |
| Cow position: | chr11:37326593-37326943 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 242 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 181, 105 |
| Conread position: | 250-590 |
| Cow position: | chr11:56514345-56514025 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 252-473 |
| Cow position: | chr11:8656841-8656621 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 48, 93 |
| Conread position: | 253-643 |
| Cow position: | chr11:75071309-75070929 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 272 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 243, 66 |
| Conread position: | 255-590 |
| Cow position: | chr11:8097317-8097651 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 217 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 163, 180 |
| Conread position: | 256-414 |
| Cow position: | chr11:42758309-42758467 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 119 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 256-493 |
| Cow position: | chr11:7055841-7056075 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 46, 40 |
| Conread position: | 256-495 |
| Cow position: | chr11:1639621-1639859 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 16, 29 |
| Conread position: | 256-502 |
| Cow position: | chr11:46872640-46872888 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 183 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 43, 137 |
| Conread position: | 257-502 |
| Cow position: | chr11:15423098-15422854 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 179 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 214, 0 |
| Conread position: | 258-474 |
| Cow position: | chr11:68243664-68243875 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 157 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 36, 45 |
| Conread position: | 259-495 |
| Cow position: | chr11:1631354-1631590 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 24, 87 |
| Conread position: | 259-495 |
| Cow position: | chr11:16790879-16790645 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 175 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 259-495 |
| Cow position: | chr11:32079614-32079850 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 175 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 259-495 |
| Cow position: | chr11:48799488-48799723 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 178 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 204, 0 |
| Conread position: | 259-495 |
| Cow position: | chr11:65816591-65816355 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 177 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 259-499 |
| Cow position: | chr11:13919654-13919417 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 173 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 100, 37 |
| Conread position: | 259-596 |
| Cow position: | chr11:18923366-18923049 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 243 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 18, 89 |
| Conread position: | 259-628 |
| Cow position: | chr11:19830488-19830859 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 242, 149 |
| Conread position: | 260-493 |
| Cow position: | chr11:61619016-61618788 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 175 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 155, 0 |
| Conread position: | 261-593 |
| Cow position: | chr11:31720135-31720465 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 119 |
| Conread position: | 263-490 |
| Cow position: | chr11:40003545-40003768 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 165 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 263-504 |
| Cow position: | chr11:61224945-61224708 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 232, 44 |
| Conread position: | 267-593 |
| Cow position: | chr11:40495673-40495999 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 238, 92 |
| Conread position: | 268-435 |
| Cow position: | chr11:24916475-24916314 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 129, 0 |
| Conread position: | 268-438 |
| Cow position: | chr11:3807150-3806980 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 129 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 268-452 |
| Cow position: | chr11:10369185-10369366 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 268-473 |
| Cow position: | chr11:21164062-21164267 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 154 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 268-495 |
| Cow position: | chr11:5533969-5534191 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 175 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 107, 0 |
| Conread position: | 268-495 |
| Cow position: | chr11:18187863-18188090 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 166 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 268-495 |
| Cow position: | chr11:30530386-30530159 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 176 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 268-495 |
| Cow position: | chr11:53681035-53680808 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 268-495 |
| Cow position: | chr11:57378697-57378479 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 162, 0 |
| Conread position: | 268-495 |
| Cow position: | chr11:63150217-63150444 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 90, 175 |
| Conread position: | 268-495 |
| Cow position: | chr11:70057502-70057729 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 268-499 |
| Cow position: | chr11:19222339-19222108 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 176 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 211, 207 |
| Conread position: | 268-500 |
| Cow position: | chr11:65815017-65814785 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 176 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 268-502 |
| Cow position: | chr11:76395405-76395172 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 173 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 228, 111 |
| Conread position: | 268-590 |
| Cow position: | chr11:82378043-82377735 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 232 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 136, 166 |
| Conread position: | 268-594 |
| Cow position: | chr11:2682213-2682520 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 231 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 179, 0 |
| Conread position: | 268-594 |
| Cow position: | chr11:26137312-26137631 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 242, 16 |
| Conread position: | 268-594 |
| Cow position: | chr11:36263800-36263489 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 237 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 163, 28 |
| Conread position: | 268-596 |
| Cow position: | chr11:56828314-56828623 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 232 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 125, 102 |
| Conread position: | 268-631 |
| Cow position: | chr11:64037430-64037081 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 173 |
| Conread position: | 268-635 |
| Cow position: | chr11:15303214-15303565 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 332, 76 |
| Conread position: | 268-635 |
| Cow position: | chr11:31440668-31441019 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 259 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 335, 229 |
| Conread position: | 268-643 |
| Cow position: | chr11:48721596-48721956 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 264 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 336, 142 |
| Conread position: | 269-621 |
| Cow position: | chr11:72539051-72538718 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 242 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 269-635 |
| Cow position: | chr11:77553716-77554062 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 333, 16 |
| Conread position: | 273-594 |
| Cow position: | chr11:33942083-33942385 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 232 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 13, 89 |
| Conread position: | 284-635 |
| Cow position: | chr11:35534125-35534461 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 248 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 101, 17 |
| Conread position: | 297-495 |
| Cow position: | chr11:65837755-65837556 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 304-593 |
| Cow position: | chr11:18621566-18621859 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 211 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 173, 124 |
| Conread position: | 310-492 |
| Cow position: | chr11:34807804-34807622 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 312-495 |
| Cow position: | chr11:18183268-18183085 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 335-493 |
| Cow position: | chr11:31605796-31605954 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 120 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.