Cow genome map
| Conread name: | Liv1-LVRM10158G02 |
| Conread position: | 245-498 |
| Cow position: | chr15:40569258-40569508 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 192 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 246-635 |
| Cow position: | chr15:18626609-18626233 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 252 |
| Conread position: | 248-495 |
| Cow position: | chr15:12687449-12687706 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 193 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 20, 8 |
| Conread position: | 248-495 |
| Cow position: | chr15:29310890-29311134 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 184 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 251-495 |
| Cow position: | chr15:9345855-9345615 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 181 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 252-490 |
| Cow position: | chr15:18249172-18248934 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 219, 7 |
| Conread position: | 253-495 |
| Cow position: | chr15:22979387-22979146 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 175 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 127, 0 |
| Conread position: | 254-502 |
| Cow position: | chr15:1234389-1234153 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 179 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 242, 175 |
| Conread position: | 254-502 |
| Cow position: | chr15:1241739-1241503 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 176 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 242, 175 |
| Conread position: | 254-635 |
| Cow position: | chr15:26614547-26614175 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 337, 242 |
| Conread position: | 255-590 |
| Cow position: | chr15:34201333-34201017 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 231 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 256-635 |
| Cow position: | chr15:20133870-20134230 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 265 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 348, 179 |
| Conread position: | 258-454 |
| Cow position: | chr15:32442987-32443182 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 259-494 |
| Cow position: | chr15:234919-235152 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 171 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 259-495 |
| Cow position: | chr15:32450799-32451033 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 170 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 259-502 |
| Cow position: | chr15:10408279-10408036 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 186 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 121 |
| Conread position: | 259-590 |
| Cow position: | chr15:34165088-34164775 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 229 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 238, 0 |
| Conread position: | 259-635 |
| Cow position: | chr15:40814182-40813821 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 343, 227 |
| Conread position: | 259-635 |
| Cow position: | chr15:51316745-51316383 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 339, 238 |
| Conread position: | 260-495 |
| Cow position: | chr15:5086830-5086595 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 183 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 260-502 |
| Cow position: | chr15:11729672-11729429 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 175 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 236, 0 |
| Conread position: | 260-502 |
| Cow position: | chr15:28063322-28063080 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 19, 84 |
| Conread position: | 260-590 |
| Cow position: | chr15:22578847-22578528 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 229 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 129, 0 |
| Conread position: | 260-592 |
| Cow position: | chr15:20344058-20344371 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 109 |
| Conread position: | 263-594 |
| Cow position: | chr15:45005825-45005512 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 234, 0 |
| Conread position: | 263-596 |
| Cow position: | chr15:1993489-1993162 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 133, 79 |
| Conread position: | 267-420 |
| Cow position: | chr15:36862801-36862648 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 118 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 268-494 |
| Cow position: | chr15:38621629-38621411 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 166 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 184, 0 |
| Conread position: | 268-495 |
| Cow position: | chr15:316135-316362 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 174 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 268-495 |
| Cow position: | chr15:767334-767095 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 170 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 268-495 |
| Cow position: | chr15:12826311-12826542 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 161 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 268-495 |
| Cow position: | chr15:17293471-17293253 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 162, 0 |
| Conread position: | 268-495 |
| Cow position: | chr15:45870024-45870251 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 176 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 268-590 |
| Cow position: | chr15:6290265-6289960 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 233 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 45, 230 |
| Conread position: | 268-594 |
| Cow position: | chr15:6185018-6185330 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 236 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 10, 233 |
| Conread position: | 268-594 |
| Cow position: | chr15:28617514-28617211 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 228 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 268-594 |
| Cow position: | chr15:42654492-42654800 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 234 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 229, 0 |
| Conread position: | 268-594 |
| Cow position: | chr15:44645167-44644861 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 221 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 268-630 |
| Cow position: | chr15:22871889-22872243 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 135, 129 |
| Conread position: | 268-635 |
| Cow position: | chr15:15372785-15373139 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 230 |
| Conread position: | 269-479 |
| Cow position: | chr15:14189080-14188873 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 190, 144 |
| Conread position: | 269-495 |
| Cow position: | chr15:39716240-39716466 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 178 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 269-590 |
| Cow position: | chr15:47152872-47152576 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 229 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 97, 0 |
| Conread position: | 270-414 |
| Cow position: | chr15:12773769-12773626 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 140, 0 |
| Conread position: | 270-593 |
| Cow position: | chr15:45997029-45996702 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 200, 0 |
| Conread position: | 271-502 |
| Cow position: | chr15:17220368-17220597 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 175 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 28, 12 |
| Conread position: | 271-590 |
| Cow position: | chr15:20126966-20127267 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 221, 0 |
| Conread position: | 272-639 |
| Cow position: | chr15:24539650-24539273 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 260 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 20, 176 |
| Conread position: | 274-495 |
| Cow position: | chr15:44592074-44592294 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 170 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 114, 0 |
| Conread position: | 274-635 |
| Cow position: | chr15:27276126-27275779 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 247 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 322, 18 |
| Conread position: | 277-593 |
| Cow position: | chr15:25072330-25072018 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 258, 7 |
| Conread position: | 281-593 |
| Cow position: | chr15:20450676-20450988 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 156, 85 |
| Conread position: | 301-594 |
| Cow position: | chr15:33484263-33483989 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 211 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 302-592 |
| Cow position: | chr15:601513-601794 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 213 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 169, 26 |
| Conread position: | 312-495 |
| Cow position: | chr15:22485053-22485235 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 133 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 151, 0 |
| Conread position: | 345-635 |
| Cow position: | chr15:15137164-15137436 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 203 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 259, 14 |
| Conread position: | 354-495 |
| Cow position: | chr15:15263614-15263755 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 106 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 466-594 |
| Cow position: | chr15:14188657-14188531 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 70, 44 |
Show alignments to all cow chromosomes.