Cow genome map
Conread name: | Liv1-LVRM10158G02 |
Conread position: | 248-638 |
Cow position: | chr16:26371809-26371433 (view UCSC Genome Browser custom track) |
Alignm length: | 395 |
Alignm identity: | 276 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 341, 249 |
Conread position: | 251-594 |
Cow position: | chr16:23524498-23524833 (view UCSC Genome Browser custom track) |
Alignm length: | 351 |
Alignm identity: | 248 |
Alignm E-value: | 9.80909e-45 |
Alignm gaps (pig, cow): | 180, 74 |
Conread position: | 254-455 |
Cow position: | chr16:3882897-3882696 (view UCSC Genome Browser custom track) |
Alignm length: | 202 |
Alignm identity: | 149 |
Alignm E-value: | 2e-36 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 256-495 |
Cow position: | chr16:3879696-3879457 (view UCSC Genome Browser custom track) |
Alignm length: | 240 |
Alignm identity: | 180 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 256-590 |
Cow position: | chr16:1626610-1626295 (view UCSC Genome Browser custom track) |
Alignm length: | 336 |
Alignm identity: | 247 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 43, 89 |
Conread position: | 256-596 |
Cow position: | chr16:12381957-12382279 (view UCSC Genome Browser custom track) |
Alignm length: | 341 |
Alignm identity: | 248 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 241, 0 |
Conread position: | 256-635 |
Cow position: | chr16:35442330-35442698 (view UCSC Genome Browser custom track) |
Alignm length: | 384 |
Alignm identity: | 269 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 346, 123 |
Conread position: | 258-499 |
Cow position: | chr16:44525039-44525277 (view UCSC Genome Browser custom track) |
Alignm length: | 242 |
Alignm identity: | 179 |
Alignm E-value: | 3.9937e-43 |
Alignm gaps (pig, cow): | 43, 0 |
Conread position: | 259-494 |
Cow position: | chr16:27116655-27116890 (view UCSC Genome Browser custom track) |
Alignm length: | 236 |
Alignm identity: | 176 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 259-495 |
Cow position: | chr16:2782692-2782921 (view UCSC Genome Browser custom track) |
Alignm length: | 237 |
Alignm identity: | 179 |
Alignm E-value: | 4.06377e-44 |
Alignm gaps (pig, cow): | 182, 0 |
Conread position: | 259-495 |
Cow position: | chr16:22319466-22319230 (view UCSC Genome Browser custom track) |
Alignm length: | 237 |
Alignm identity: | 178 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 259-495 |
Cow position: | chr16:55460952-55460719 (view UCSC Genome Browser custom track) |
Alignm length: | 237 |
Alignm identity: | 171 |
Alignm E-value: | 7e-38 |
Alignm gaps (pig, cow): | 111, 0 |
Conread position: | 259-590 |
Cow position: | chr16:2520241-2519928 (view UCSC Genome Browser custom track) |
Alignm length: | 332 |
Alignm identity: | 238 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 238, 0 |
Conread position: | 259-593 |
Cow position: | chr16:11299867-11299559 (view UCSC Genome Browser custom track) |
Alignm length: | 336 |
Alignm identity: | 231 |
Alignm E-value: | 3e-30 |
Alignm gaps (pig, cow): | 66, 42 |
Conread position: | 260-495 |
Cow position: | chr16:3884757-3884992 (view UCSC Genome Browser custom track) |
Alignm length: | 236 |
Alignm identity: | 175 |
Alignm E-value: | 5.60519e-45 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 260-504 |
Cow position: | chr16:20979932-20979682 (view UCSC Genome Browser custom track) |
Alignm length: | 253 |
Alignm identity: | 182 |
Alignm E-value: | 5e-36 |
Alignm gaps (pig, cow): | 18, 89 |
Conread position: | 260-635 |
Cow position: | chr16:53810956-53811325 (view UCSC Genome Browser custom track) |
Alignm length: | 389 |
Alignm identity: | 272 |
Alignm E-value: | 1.00053e-42 |
Alignm gaps (pig, cow): | 119, 46 |
Conread position: | 263-590 |
Cow position: | chr16:54303150-54302845 (view UCSC Genome Browser custom track) |
Alignm length: | 328 |
Alignm identity: | 230 |
Alignm E-value: | 7e-38 |
Alignm gaps (pig, cow): | 21, 0 |
Conread position: | 266-495 |
Cow position: | chr16:35411081-35411310 (view UCSC Genome Browser custom track) |
Alignm length: | 230 |
Alignm identity: | 174 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 267-639 |
Cow position: | chr16:27841621-27841990 (view UCSC Genome Browser custom track) |
Alignm length: | 376 |
Alignm identity: | 276 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 270, 132 |
Conread position: | 268-490 |
Cow position: | chr16:4837776-4837998 (view UCSC Genome Browser custom track) |
Alignm length: | 223 |
Alignm identity: | 174 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 268-491 |
Cow position: | chr16:37427617-37427835 (view UCSC Genome Browser custom track) |
Alignm length: | 224 |
Alignm identity: | 163 |
Alignm E-value: | 5e-36 |
Alignm gaps (pig, cow): | 60, 0 |
Conread position: | 268-492 |
Cow position: | chr16:19260942-19261166 (view UCSC Genome Browser custom track) |
Alignm length: | 225 |
Alignm identity: | 172 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 268-495 |
Cow position: | chr16:1156234-1156007 (view UCSC Genome Browser custom track) |
Alignm length: | 228 |
Alignm identity: | 175 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 268-495 |
Cow position: | chr16:2251570-2251345 (view UCSC Genome Browser custom track) |
Alignm length: | 228 |
Alignm identity: | 173 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 44, 0 |
Conread position: | 268-495 |
Cow position: | chr16:8915250-8915025 (view UCSC Genome Browser custom track) |
Alignm length: | 233 |
Alignm identity: | 167 |
Alignm E-value: | 3e-31 |
Alignm gaps (pig, cow): | 118, 84 |
Conread position: | 268-495 |
Cow position: | chr16:19679838-19680062 (view UCSC Genome Browser custom track) |
Alignm length: | 228 |
Alignm identity: | 169 |
Alignm E-value: | 8.99998e-41 |
Alignm gaps (pig, cow): | 176, 0 |
Conread position: | 268-495 |
Cow position: | chr16:23950325-23950098 (view UCSC Genome Browser custom track) |
Alignm length: | 228 |
Alignm identity: | 175 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 268-495 |
Cow position: | chr16:26958510-26958733 (view UCSC Genome Browser custom track) |
Alignm length: | 228 |
Alignm identity: | 166 |
Alignm E-value: | 6e-37 |
Alignm gaps (pig, cow): | 76, 0 |
Conread position: | 268-495 |
Cow position: | chr16:34778603-34778837 (view UCSC Genome Browser custom track) |
Alignm length: | 235 |
Alignm identity: | 175 |
Alignm E-value: | 3e-40 |
Alignm gaps (pig, cow): | 16, 0 |
Conread position: | 268-495 |
Cow position: | chr16:43170103-43170325 (view UCSC Genome Browser custom track) |
Alignm length: | 228 |
Alignm identity: | 156 |
Alignm E-value: | 7e-28 |
Alignm gaps (pig, cow): | 153, 0 |
Conread position: | 268-495 |
Cow position: | chr16:50448946-50449173 (view UCSC Genome Browser custom track) |
Alignm length: | 231 |
Alignm identity: | 170 |
Alignm E-value: | 7e-38 |
Alignm gaps (pig, cow): | 77, 54 |
Conread position: | 268-500 |
Cow position: | chr16:1633859-1633629 (view UCSC Genome Browser custom track) |
Alignm length: | 233 |
Alignm identity: | 169 |
Alignm E-value: | 7e-39 |
Alignm gaps (pig, cow): | 112, 0 |
Conread position: | 268-502 |
Cow position: | chr16:37095022-37095258 (view UCSC Genome Browser custom track) |
Alignm length: | 237 |
Alignm identity: | 185 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 14, 0 |
Conread position: | 268-503 |
Cow position: | chr16:46375578-46375814 (view UCSC Genome Browser custom track) |
Alignm length: | 238 |
Alignm identity: | 178 |
Alignm E-value: | 4.06377e-44 |
Alignm gaps (pig, cow): | 65, 190 |
Conread position: | 268-504 |
Cow position: | chr16:43117372-43117600 (view UCSC Genome Browser custom track) |
Alignm length: | 238 |
Alignm identity: | 169 |
Alignm E-value: | 4e-32 |
Alignm gaps (pig, cow): | 228, 109 |
Conread position: | 268-504 |
Cow position: | chr16:52807834-52808071 (view UCSC Genome Browser custom track) |
Alignm length: | 239 |
Alignm identity: | 177 |
Alignm E-value: | 1.00053e-42 |
Alignm gaps (pig, cow): | 74, 126 |
Conread position: | 268-507 |
Cow position: | chr16:55253339-55253568 (view UCSC Genome Browser custom track) |
Alignm length: | 241 |
Alignm identity: | 172 |
Alignm E-value: | 3e-31 |
Alignm gaps (pig, cow): | 228, 36 |
Conread position: | 268-589 |
Cow position: | chr16:32768870-32768567 (view UCSC Genome Browser custom track) |
Alignm length: | 323 |
Alignm identity: | 235 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 283, 229 |
Conread position: | 268-590 |
Cow position: | chr16:53129056-53128749 (view UCSC Genome Browser custom track) |
Alignm length: | 323 |
Alignm identity: | 233 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 227, 0 |
Conread position: | 268-594 |
Cow position: | chr16:22832434-22832739 (view UCSC Genome Browser custom track) |
Alignm length: | 327 |
Alignm identity: | 239 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 173, 0 |
Conread position: | 268-594 |
Cow position: | chr16:34946807-34947129 (view UCSC Genome Browser custom track) |
Alignm length: | 329 |
Alignm identity: | 241 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 243, 28 |
Conread position: | 268-632 |
Cow position: | chr16:53835437-53835810 (view UCSC Genome Browser custom track) |
Alignm length: | 380 |
Alignm identity: | 272 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 46, 24 |
Conread position: | 268-634 |
Cow position: | chr16:53605146-53605490 (view UCSC Genome Browser custom track) |
Alignm length: | 371 |
Alignm identity: | 256 |
Alignm E-value: | 6e-37 |
Alignm gaps (pig, cow): | 191, 102 |
Conread position: | 268-635 |
Cow position: | chr16:23968157-23967816 (view UCSC Genome Browser custom track) |
Alignm length: | 372 |
Alignm identity: | 245 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 336, 54 |
Conread position: | 269-493 |
Cow position: | chr16:31536147-31536371 (view UCSC Genome Browser custom track) |
Alignm length: | 225 |
Alignm identity: | 169 |
Alignm E-value: | 9.80909e-45 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 269-494 |
Cow position: | chr16:30978387-30978612 (view UCSC Genome Browser custom track) |
Alignm length: | 226 |
Alignm identity: | 158 |
Alignm E-value: | 1e-33 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 269-495 |
Cow position: | chr16:30580419-30580645 (view UCSC Genome Browser custom track) |
Alignm length: | 227 |
Alignm identity: | 173 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 269-502 |
Cow position: | chr16:43173772-43173544 (view UCSC Genome Browser custom track) |
Alignm length: | 234 |
Alignm identity: | 176 |
Alignm E-value: | 3.9937e-43 |
Alignm gaps (pig, cow): | 27, 0 |
Conread position: | 269-635 |
Cow position: | chr16:30602657-30602301 (view UCSC Genome Browser custom track) |
Alignm length: | 377 |
Alignm identity: | 253 |
Alignm E-value: | 3e-30 |
Alignm gaps (pig, cow): | 266, 133 |
Conread position: | 271-635 |
Cow position: | chr16:35514082-35513733 (view UCSC Genome Browser custom track) |
Alignm length: | 370 |
Alignm identity: | 260 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 28, 74 |
Conread position: | 271-636 |
Cow position: | chr16:18062004-18062365 (view UCSC Genome Browser custom track) |
Alignm length: | 368 |
Alignm identity: | 275 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 236, 65 |
Conread position: | 298-593 |
Cow position: | chr16:18356521-18356799 (view UCSC Genome Browser custom track) |
Alignm length: | 297 |
Alignm identity: | 219 |
Alignm E-value: | 4.06377e-44 |
Alignm gaps (pig, cow): | 212, 44 |
Conread position: | 312-589 |
Cow position: | chr16:17778376-17778663 (view UCSC Genome Browser custom track) |
Alignm length: | 288 |
Alignm identity: | 217 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 198, 0 |
Conread position: | 314-490 |
Cow position: | chr16:33910453-33910629 (view UCSC Genome Browser custom track) |
Alignm length: | 177 |
Alignm identity: | 129 |
Alignm E-value: | 3e-29 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 345-495 |
Cow position: | chr16:46440865-46441015 (view UCSC Genome Browser custom track) |
Alignm length: | 151 |
Alignm identity: | 113 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 350-495 |
Cow position: | chr16:31795054-31794909 (view UCSC Genome Browser custom track) |
Alignm length: | 146 |
Alignm identity: | 108 |
Alignm E-value: | 5e-24 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 385-633 |
Cow position: | chr16:56223382-56223133 (view UCSC Genome Browser custom track) |
Alignm length: | 255 |
Alignm identity: | 176 |
Alignm E-value: | 6e-27 |
Alignm gaps (pig, cow): | 46, 116 |
Show alignments to all cow chromosomes.