Cow genome map

Conread name: Liv1-LVRM10158G02

Conread position: 248-638
Cow position: chr16:26371809-26371433 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 341, 249

Conread position: 251-594
Cow position: chr16:23524498-23524833 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 248
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 180, 74

Conread position: 254-455
Cow position: chr16:3882897-3882696 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 149
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 256-495
Cow position: chr16:3879696-3879457 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 180
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 256-590
Cow position: chr16:1626610-1626295 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 89

Conread position: 256-596
Cow position: chr16:12381957-12382279 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 241, 0

Conread position: 256-635
Cow position: chr16:35442330-35442698 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 346, 123

Conread position: 258-499
Cow position: chr16:44525039-44525277 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 179
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 43, 0

Conread position: 259-494
Cow position: chr16:27116655-27116890 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 259-495
Cow position: chr16:2782692-2782921 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 179
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 182, 0

Conread position: 259-495
Cow position: chr16:22319466-22319230 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 259-495
Cow position: chr16:55460952-55460719 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 171
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 111, 0

Conread position: 259-590
Cow position: chr16:2520241-2519928 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 238, 0

Conread position: 259-593
Cow position: chr16:11299867-11299559 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 231
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 66, 42

Conread position: 260-495
Cow position: chr16:3884757-3884992 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 175
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 0, 0

Conread position: 260-504
Cow position: chr16:20979932-20979682 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 182
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 18, 89

Conread position: 260-635
Cow position: chr16:53810956-53811325 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 272
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 119, 46

Conread position: 263-590
Cow position: chr16:54303150-54302845 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 230
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 21, 0

Conread position: 266-495
Cow position: chr16:35411081-35411310 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 267-639
Cow position: chr16:27841621-27841990 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 270, 132

Conread position: 268-490
Cow position: chr16:4837776-4837998 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 268-491
Cow position: chr16:37427617-37427835 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 163
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 60, 0

Conread position: 268-492
Cow position: chr16:19260942-19261166 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 172
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 268-495
Cow position: chr16:1156234-1156007 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 268-495
Cow position: chr16:2251570-2251345 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 173
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 44, 0

Conread position: 268-495
Cow position: chr16:8915250-8915025 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 167
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 118, 84

Conread position: 268-495
Cow position: chr16:19679838-19680062 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 169
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 176, 0

Conread position: 268-495
Cow position: chr16:23950325-23950098 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 268-495
Cow position: chr16:26958510-26958733 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 166
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 76, 0

Conread position: 268-495
Cow position: chr16:34778603-34778837 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 175
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 16, 0

Conread position: 268-495
Cow position: chr16:43170103-43170325 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 156
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 153, 0

Conread position: 268-495
Cow position: chr16:50448946-50449173 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 170
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 77, 54

Conread position: 268-500
Cow position: chr16:1633859-1633629 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 169
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 112, 0

Conread position: 268-502
Cow position: chr16:37095022-37095258 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 0

Conread position: 268-503
Cow position: chr16:46375578-46375814 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 178
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 65, 190

Conread position: 268-504
Cow position: chr16:43117372-43117600 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 169
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 228, 109

Conread position: 268-504
Cow position: chr16:52807834-52808071 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 177
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 74, 126

Conread position: 268-507
Cow position: chr16:55253339-55253568 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 172
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 228, 36

Conread position: 268-589
Cow position: chr16:32768870-32768567 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 283, 229

Conread position: 268-590
Cow position: chr16:53129056-53128749 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 227, 0

Conread position: 268-594
Cow position: chr16:22832434-22832739 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 173, 0

Conread position: 268-594
Cow position: chr16:34946807-34947129 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 28

Conread position: 268-632
Cow position: chr16:53835437-53835810 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 24

Conread position: 268-634
Cow position: chr16:53605146-53605490 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 256
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 191, 102

Conread position: 268-635
Cow position: chr16:23968157-23967816 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 245
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 336, 54

Conread position: 269-493
Cow position: chr16:31536147-31536371 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 169
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 0, 0

Conread position: 269-494
Cow position: chr16:30978387-30978612 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 158
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 269-495
Cow position: chr16:30580419-30580645 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 173
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 269-502
Cow position: chr16:43173772-43173544 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 176
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 27, 0

Conread position: 269-635
Cow position: chr16:30602657-30602301 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 253
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 266, 133

Conread position: 271-635
Cow position: chr16:35514082-35513733 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 74

Conread position: 271-636
Cow position: chr16:18062004-18062365 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 236, 65

Conread position: 298-593
Cow position: chr16:18356521-18356799 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 219
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 212, 44

Conread position: 312-589
Cow position: chr16:17778376-17778663 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 198, 0

Conread position: 314-490
Cow position: chr16:33910453-33910629 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 129
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 345-495
Cow position: chr16:46440865-46441015 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 113
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 350-495
Cow position: chr16:31795054-31794909 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 108
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 385-633
Cow position: chr16:56223382-56223133 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 176
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 46, 116

Show alignments to all cow chromosomes.