Cow genome map
| Conread name: | Liv1-LVRM10158G02 |
| Conread position: | 247-495 |
| Cow position: | chr18:22257212-22256961 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 192 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 254-628 |
| Cow position: | chr18:29268587-29268220 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 165, 35 |
| Conread position: | 257-412 |
| Cow position: | chr18:43134729-43134574 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 117 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 257-495 |
| Cow position: | chr18:14247045-14246814 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 176 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 187, 0 |
| Conread position: | 258-507 |
| Cow position: | chr18:1176624-1176378 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 186 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 238, 9 |
| Conread position: | 259-495 |
| Cow position: | chr18:17321143-17321379 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 177 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 126, 42 |
| Conread position: | 259-495 |
| Cow position: | chr18:24230701-24230467 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 171 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 259-643 |
| Cow position: | chr18:39683277-39683647 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 341, 238 |
| Conread position: | 260-495 |
| Cow position: | chr18:40060447-40060682 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 182 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 260-502 |
| Cow position: | chr18:37709587-37709342 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 112, 224 |
| Conread position: | 263-495 |
| Cow position: | chr18:17319712-17319480 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 173 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 98, 5 |
| Conread position: | 263-495 |
| Cow position: | chr18:43488236-43488004 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 164 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 267-495 |
| Cow position: | chr18:21715955-21716181 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 268-450 |
| Cow position: | chr18:1517949-1518127 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 131 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 268-493 |
| Cow position: | chr18:17339648-17339424 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 176 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 268-493 |
| Cow position: | chr18:33972275-33972505 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 169 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 34, 16 |
| Conread position: | 268-495 |
| Cow position: | chr18:464465-464676 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 160 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 268-495 |
| Cow position: | chr18:8912447-8912220 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 173 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 268-495 |
| Cow position: | chr18:32793668-32793442 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 173 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 195, 0 |
| Conread position: | 268-495 |
| Cow position: | chr18:54127692-54127469 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 173 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 163, 0 |
| Conread position: | 268-499 |
| Cow position: | chr18:30693386-30693155 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 170 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 268-502 |
| Cow position: | chr18:13727574-13727805 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 169 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 228, 98 |
| Conread position: | 268-589 |
| Cow position: | chr18:20220579-20220279 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 237 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 173, 57 |
| Conread position: | 268-590 |
| Cow position: | chr18:24145649-24145958 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 227 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 251, 111 |
| Conread position: | 268-590 |
| Cow position: | chr18:30973551-30973855 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 229, 0 |
| Conread position: | 268-590 |
| Cow position: | chr18:39936007-39936311 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 231 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 119, 229 |
| Conread position: | 268-593 |
| Cow position: | chr18:38348542-38348847 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 142, 0 |
| Conread position: | 268-594 |
| Cow position: | chr18:44005635-44005327 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 233 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 229, 0 |
| Conread position: | 268-604 |
| Cow position: | chr18:51022580-51022897 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 235 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 229, 0 |
| Conread position: | 268-635 |
| Cow position: | chr18:6808582-6808230 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 254 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 89, 94 |
| Conread position: | 268-635 |
| Cow position: | chr18:40702905-40703252 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 258 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 179, 162 |
| Conread position: | 268-635 |
| Cow position: | chr18:42834543-42834194 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 258 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 330, 146 |
| Conread position: | 268-639 |
| Cow position: | chr18:56481010-56481369 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 267, 76 |
| Conread position: | 269-594 |
| Cow position: | chr18:6087616-6087923 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 236 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 30, 24 |
| Conread position: | 270-592 |
| Cow position: | chr18:18470678-18470377 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 227 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 270-639 |
| Cow position: | chr18:53534096-53534445 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 263 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 265, 90 |
| Conread position: | 271-493 |
| Cow position: | chr18:17311280-17311067 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 281-593 |
| Cow position: | chr18:42160951-42160657 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 216, 0 |
| Conread position: | 286-499 |
| Cow position: | chr18:43797594-43797804 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 286-596 |
| Cow position: | chr18:54120814-54120516 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 249, 211 |
| Conread position: | 296-639 |
| Cow position: | chr18:22168245-22168594 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 71 |
| Conread position: | 303-507 |
| Cow position: | chr18:11919654-11919452 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 158 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 193, 107 |
| Conread position: | 318-596 |
| Cow position: | chr18:13702761-13702497 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 203 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 9, 136 |
| Conread position: | 340-495 |
| Cow position: | chr18:1974753-1974601 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 114 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 39, 0 |
Show alignments to all cow chromosomes.