Cow genome map
| Conread name: | Liv1-LVRM10158G02 |
| Conread position: | 210-495 |
| Cow position: | chr19:34066385-34066100 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 67 |
| Conread position: | 243-500 |
| Cow position: | chr19:35641281-35641025 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 192 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 9 |
| Conread position: | 247-495 |
| Cow position: | chr19:3930392-3930154 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 179 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 247-499 |
| Cow position: | chr19:42246038-42246287 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 250-507 |
| Cow position: | chr19:50550541-50550285 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 93, 17 |
| Conread position: | 250-635 |
| Cow position: | chr19:28945064-28944698 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 181, 143 |
| Conread position: | 251-495 |
| Cow position: | chr19:33257671-33257915 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 183 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 253-594 |
| Cow position: | chr19:35616568-35616250 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 237 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 182, 0 |
| Conread position: | 254-593 |
| Cow position: | chr19:47874789-47874468 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 241 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 241, 0 |
| Conread position: | 254-635 |
| Cow position: | chr19:28608917-28608552 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 267 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 59, 175 |
| Conread position: | 254-635 |
| Cow position: | chr19:38055186-38055552 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 344, 156 |
| Conread position: | 256-495 |
| Cow position: | chr19:13227500-13227739 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 184 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 256-495 |
| Cow position: | chr19:30242594-30242356 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 174 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 23, 90 |
| Conread position: | 256-624 |
| Cow position: | chr19:28469164-28469516 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 342, 45 |
| Conread position: | 257-467 |
| Cow position: | chr19:37277176-37276968 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 259-493 |
| Cow position: | chr19:45585386-45585620 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 173 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 259-495 |
| Cow position: | chr19:19008243-19008005 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 177 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 19, 89 |
| Conread position: | 259-495 |
| Cow position: | chr19:50658042-50657808 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 179 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 111, 0 |
| Conread position: | 259-590 |
| Cow position: | chr19:6476713-6477013 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 225 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 158, 0 |
| Conread position: | 260-635 |
| Cow position: | chr19:11209675-11210037 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 271 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 12, 26 |
| Conread position: | 267-493 |
| Cow position: | chr19:43751077-43750850 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 171 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 267-594 |
| Cow position: | chr19:39753579-39753270 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 225, 0 |
| Conread position: | 267-596 |
| Cow position: | chr19:11111768-11112079 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 229, 0 |
| Conread position: | 267-635 |
| Cow position: | chr19:7700355-7700711 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 231 |
| Conread position: | 268-493 |
| Cow position: | chr19:11241573-11241348 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 169 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 268-494 |
| Cow position: | chr19:53640308-53640088 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 163 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 268-495 |
| Cow position: | chr19:6471779-6472007 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 101, 217 |
| Conread position: | 268-495 |
| Cow position: | chr19:8550969-8551196 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 178 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 268-495 |
| Cow position: | chr19:14380369-14380142 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 174 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 268-495 |
| Cow position: | chr19:27823682-27823908 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 175 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 111, 0 |
| Conread position: | 268-502 |
| Cow position: | chr19:42155892-42155657 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 174 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 226, 0 |
| Conread position: | 268-590 |
| Cow position: | chr19:7715120-7714792 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 230 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 101, 153 |
| Conread position: | 268-590 |
| Cow position: | chr19:28436897-28437200 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 233 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 34, 114 |
| Conread position: | 268-590 |
| Cow position: | chr19:30263430-30263749 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 218 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 75, 16 |
| Conread position: | 268-594 |
| Cow position: | chr19:2939386-2939681 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 232 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 91, 76 |
| Conread position: | 268-596 |
| Cow position: | chr19:27828300-27828608 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 228 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 268-635 |
| Cow position: | chr19:43435177-43434826 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 260 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 330, 68 |
| Conread position: | 268-635 |
| Cow position: | chr19:50677456-50677808 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 332, 102 |
| Conread position: | 268-635 |
| Cow position: | chr19:52332433-52332795 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 191, 114 |
| Conread position: | 268-639 |
| Cow position: | chr19:21125644-21125281 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 267, 98 |
| Conread position: | 269-495 |
| Cow position: | chr19:6486061-6485846 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 161 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 30, 15 |
| Conread position: | 272-494 |
| Cow position: | chr19:28446642-28446423 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 272-495 |
| Cow position: | chr19:14480156-14480379 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 170 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 284-635 |
| Cow position: | chr19:30251570-30251235 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 245 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 15, 61 |
| Conread position: | 286-635 |
| Cow position: | chr19:11978667-11979004 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 252 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 13, 211 |
| Conread position: | 288-493 |
| Cow position: | chr19:53533806-53533604 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 153 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 290-594 |
| Cow position: | chr19:2011768-2011472 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 224 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 141, 123 |
| Conread position: | 294-592 |
| Cow position: | chr19:8824202-8823907 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 217 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 211, 104 |
| Conread position: | 297-495 |
| Cow position: | chr19:12053756-12053557 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 158 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 6, 0 |
| Conread position: | 297-495 |
| Cow position: | chr19:12066836-12067035 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 157 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 6, 0 |
| Conread position: | 298-495 |
| Cow position: | chr19:33082158-33082355 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 298-593 |
| Cow position: | chr19:24985879-24986169 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 39 |
Show alignments to all cow chromosomes.