Cow genome map
| Conread name: | Liv1-LVRM10158G02 |
| Conread position: | 150-495 |
| Cow position: | chr2:82290225-82290567 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 24 |
| Conread position: | 225-494 |
| Cow position: | chr2:80565568-80565830 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 189 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 19, 37 |
| Conread position: | 237-596 |
| Cow position: | chr2:68157424-68157083 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 251 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 23, 109 |
| Conread position: | 247-502 |
| Cow position: | chr2:36586516-36586772 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 189 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 8, 201 |
| Conread position: | 251-437 |
| Cow position: | chr2:5513567-5513385 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 141 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 253-635 |
| Cow position: | chr2:25245009-25245378 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 245 |
| Conread position: | 254-596 |
| Cow position: | chr2:32227363-32227689 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 246 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 19, 203 |
| Conread position: | 255-600 |
| Cow position: | chr2:76038884-76039214 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 255 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 176, 89 |
| Conread position: | 256-416 |
| Cow position: | chr2:31893933-31894093 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 119 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 256-495 |
| Cow position: | chr2:16807987-16808226 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 184 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 256-635 |
| Cow position: | chr2:46767022-46766657 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 346, 241 |
| Conread position: | 257-494 |
| Cow position: | chr2:41630361-41630124 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 180 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 259-467 |
| Cow position: | chr2:74690830-74691038 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 145 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 259-495 |
| Cow position: | chr2:21890407-21890643 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 177 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 259-495 |
| Cow position: | chr2:56316779-56317014 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 175 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 200, 59 |
| Conread position: | 259-495 |
| Cow position: | chr2:64659740-64659504 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 173 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 259-590 |
| Cow position: | chr2:52373419-52373731 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 235 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 188, 0 |
| Conread position: | 259-593 |
| Cow position: | chr2:21635895-21636225 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 130, 107 |
| Conread position: | 259-596 |
| Cow position: | chr2:3484336-3484655 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 243 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 69, 144 |
| Conread position: | 259-596 |
| Cow position: | chr2:26527447-26527124 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 243 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 148, 243 |
| Conread position: | 259-613 |
| Cow position: | chr2:44415606-44415935 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 245 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 86, 108 |
| Conread position: | 259-635 |
| Cow position: | chr2:46774816-46775178 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 330, 238 |
| Conread position: | 260-495 |
| Cow position: | chr2:36857479-36857712 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 18, 42 |
| Conread position: | 260-495 |
| Cow position: | chr2:45558219-45557992 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 173 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 18, 82 |
| Conread position: | 260-635 |
| Cow position: | chr2:55826005-55825645 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 260 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 340, 125 |
| Conread position: | 261-638 |
| Cow position: | chr2:596526-596888 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 256 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 337, 186 |
| Conread position: | 262-594 |
| Cow position: | chr2:58697340-58697662 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 245 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 127, 21 |
| Conread position: | 263-494 |
| Cow position: | chr2:47571897-47571666 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 174 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 216, 212 |
| Conread position: | 263-596 |
| Cow position: | chr2:18160190-18160504 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 264-594 |
| Cow position: | chr2:74229869-74230181 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 229 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 232, 0 |
| Conread position: | 266-493 |
| Cow position: | chr2:11252129-11252353 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 170 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 266-495 |
| Cow position: | chr2:58342691-58342920 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 173 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 267-497 |
| Cow position: | chr2:80585954-80585725 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 173 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 268-471 |
| Cow position: | chr2:40413213-40413416 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 26, 34 |
| Conread position: | 268-473 |
| Cow position: | chr2:37756286-37756490 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 167, 0 |
| Conread position: | 268-493 |
| Cow position: | chr2:44506834-44507059 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 268-495 |
| Cow position: | chr2:7295265-7295038 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 178 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 268-495 |
| Cow position: | chr2:7547211-7546986 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 171 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 268-495 |
| Cow position: | chr2:9019773-9019997 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 167 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 268-495 |
| Cow position: | chr2:16798005-16798232 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 175 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 268-495 |
| Cow position: | chr2:37171025-37170798 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 174 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 268-495 |
| Cow position: | chr2:46025941-46026165 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 174 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 268-495 |
| Cow position: | chr2:47840158-47839931 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 175 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 268-495 |
| Cow position: | chr2:48511909-48512135 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 164 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 153, 0 |
| Conread position: | 268-495 |
| Cow position: | chr2:58852956-58853185 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 172 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 168, 0 |
| Conread position: | 268-495 |
| Cow position: | chr2:65682721-65682949 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 158 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 130, 0 |
| Conread position: | 268-495 |
| Cow position: | chr2:70651818-70651598 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 171 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 159, 0 |
| Conread position: | 268-495 |
| Cow position: | chr2:77921510-77921737 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 166 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 268-495 |
| Cow position: | chr2:80147538-80147765 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 179 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 268-502 |
| Cow position: | chr2:74691248-74691480 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 177 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 229, 68 |
| Conread position: | 268-507 |
| Cow position: | chr2:66060346-66060109 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 228, 76 |
| Conread position: | 268-579 |
| Cow position: | chr2:85328377-85328678 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 267, 84 |
| Conread position: | 268-590 |
| Cow position: | chr2:11882146-11881844 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 230 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 34, 28 |
| Conread position: | 268-590 |
| Cow position: | chr2:46774489-46774184 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 233 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 13, 230 |
| Conread position: | 268-592 |
| Cow position: | chr2:28587368-28587677 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 28 |
| Conread position: | 268-594 |
| Cow position: | chr2:61219840-61219536 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 226 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 130, 0 |
| Conread position: | 268-635 |
| Cow position: | chr2:66701498-66701145 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 332, 229 |
| Conread position: | 268-635 |
| Cow position: | chr2:86168873-86169224 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 261 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 334, 102 |
| Conread position: | 268-637 |
| Cow position: | chr2:63086809-63087160 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 261 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 267, 76 |
| Conread position: | 268-643 |
| Cow position: | chr2:52328711-52329076 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 266 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 45, 232 |
| Conread position: | 269-471 |
| Cow position: | chr2:57984255-57984454 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 147 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 145, 0 |
| Conread position: | 269-594 |
| Cow position: | chr2:62460925-62461246 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 229 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 200, 16 |
| Conread position: | 270-495 |
| Cow position: | chr2:39753153-39753378 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 166 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 270-639 |
| Cow position: | chr2:1633221-1632857 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 244 |
| Conread position: | 271-495 |
| Cow position: | chr2:30930622-30930398 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 168 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 271-591 |
| Cow position: | chr2:75069250-75068930 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 13 |
| Conread position: | 280-592 |
| Cow position: | chr2:35400489-35400187 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 220 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 45, 16 |
| Conread position: | 286-635 |
| Cow position: | chr2:55287174-55287509 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 248 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 314, 211 |
| Conread position: | 301-484 |
| Cow position: | chr2:36621921-36621743 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 135 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 301-602 |
| Cow position: | chr2:68958601-68958882 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 217 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 288, 158 |
| Conread position: | 333-495 |
| Cow position: | chr2:19148463-19148625 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 124 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 380-502 |
| Cow position: | chr2:57979686-57979563 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 96 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 116, 0 |
| Conread position: | 397-637 |
| Cow position: | chr2:24812803-24812564 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 117, 20 |
| Conread position: | 412-593 |
| Cow position: | chr2:30688478-30688298 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 137 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 125, 42 |
Show alignments to all cow chromosomes.