Cow genome map
| Conread name: | Liv1-LVRM10158G02 |
| Conread position: | 224-495 |
| Cow position: | chr25:32751350-32751620 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 199 |
| Alignm E-value: | 8.96831e-44 |
| Alignm gaps (pig, cow): | 44, 9 |
| Conread position: | 245-495 |
| Cow position: | chr25:12250154-12250401 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 187 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 245-602 |
| Cow position: | chr25:7221481-7221150 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 57 |
| Conread position: | 251-495 |
| Cow position: | chr25:14532500-14532256 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 183 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 251-495 |
| Cow position: | chr25:34038632-34038874 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 183 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 48, 10 |
| Conread position: | 255-590 |
| Cow position: | chr25:6276231-6275914 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 242, 0 |
| Conread position: | 256-594 |
| Cow position: | chr25:7771351-7771028 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 239 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 13, 129 |
| Conread position: | 257-590 |
| Cow position: | chr25:17372977-17373307 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 234 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 181, 199 |
| Conread position: | 259-495 |
| Cow position: | chr25:23600170-23600406 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 179 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 259-502 |
| Cow position: | chr25:8623946-8624195 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 135, 0 |
| Conread position: | 259-502 |
| Cow position: | chr25:13714304-13714061 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 182 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 78, 73 |
| Conread position: | 259-618 |
| Cow position: | chr25:14532909-14532566 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 276, 134 |
| Conread position: | 259-635 |
| Cow position: | chr25:4624842-4625205 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 263 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 161, 236 |
| Conread position: | 259-635 |
| Cow position: | chr25:6879644-6879281 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 266 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 19, 239 |
| Conread position: | 259-635 |
| Cow position: | chr25:12664565-12664205 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 365, 238 |
| Conread position: | 259-636 |
| Cow position: | chr25:3630769-3631131 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 341, 66 |
| Conread position: | 260-494 |
| Cow position: | chr25:12244060-12244294 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 181 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 260-495 |
| Cow position: | chr25:30473883-30473648 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 179 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 267-415 |
| Cow position: | chr25:3739102-3738954 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 112 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 102, 109 |
| Conread position: | 268-407 |
| Cow position: | chr25:34764302-34764441 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 103 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 268-451 |
| Cow position: | chr25:5202304-5202486 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 135 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 120, 0 |
| Conread position: | 268-494 |
| Cow position: | chr25:22814170-22814394 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 163 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 268-495 |
| Cow position: | chr25:6808314-6808541 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 174 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 268-495 |
| Cow position: | chr25:11650738-11650965 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 176 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 268-495 |
| Cow position: | chr25:20051618-20051391 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 173 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 268-495 |
| Cow position: | chr25:21133323-21133099 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 167 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 268-495 |
| Cow position: | chr25:29251735-29251503 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 177 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 173, 0 |
| Conread position: | 268-495 |
| Cow position: | chr25:31979495-31979717 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 170 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 140, 0 |
| Conread position: | 268-495 |
| Cow position: | chr25:32677046-32677273 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 268-495 |
| Cow position: | chr25:34686066-34686285 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 209, 165 |
| Conread position: | 268-495 |
| Cow position: | chr25:41131484-41131257 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 168 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 268-495 |
| Cow position: | chr25:41238326-41238104 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 167 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 183, 39 |
| Conread position: | 268-498 |
| Cow position: | chr25:21519066-21518836 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 178 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 268-502 |
| Cow position: | chr25:10152636-10152399 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 177 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 268-502 |
| Cow position: | chr25:10339266-10339499 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 174 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 117, 185 |
| Conread position: | 268-590 |
| Cow position: | chr25:13675026-13674723 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 171, 0 |
| Conread position: | 268-590 |
| Cow position: | chr25:18443387-18443690 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 230 |
| Alignm E-value: | 8.00141e-43 |
| Alignm gaps (pig, cow): | 134, 0 |
| Conread position: | 268-590 |
| Cow position: | chr25:21141284-21140981 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 232 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 268-590 |
| Cow position: | chr25:36156954-36156650 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 230 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 229, 0 |
| Conread position: | 268-635 |
| Cow position: | chr25:10726652-10727015 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 258 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 236, 89 |
| Conread position: | 268-635 |
| Cow position: | chr25:18307987-18307616 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 255 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 143, 136 |
| Conread position: | 269-490 |
| Cow position: | chr25:4617038-4617259 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 175 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 269-495 |
| Cow position: | chr25:20259257-20259035 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 161 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 277-494 |
| Cow position: | chr25:6918640-6918422 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 169 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 5, 20 |
| Conread position: | 278-594 |
| Cow position: | chr25:11266317-11266017 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 228 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 119, 221 |
| Conread position: | 287-495 |
| Cow position: | chr25:7509062-7509267 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 99, 70 |
| Conread position: | 301-594 |
| Cow position: | chr25:5776796-5777067 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 211 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 312-585 |
| Cow position: | chr25:7489751-7489488 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 206 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 359-486 |
| Cow position: | chr25:16134870-16134997 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 100 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 449-592 |
| Cow position: | chr25:5202504-5202649 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 118 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 461-639 |
| Cow position: | chr25:37620048-37619868 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 50, 138 |
Show alignments to all cow chromosomes.