Cow genome map
| Conread name: | Liv1-LVRM10158G02 |
| Conread position: | 230-425 |
| Cow position: | chr7:32895817-32896013 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 146 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 238-596 |
| Cow position: | chr7:6375944-6376275 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 248 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 238-643 |
| Cow position: | chr7:4598338-4597940 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 59 |
| Conread position: | 241-426 |
| Cow position: | chr7:7867290-7867475 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 37, 20 |
| Conread position: | 244-491 |
| Cow position: | chr7:21993315-21993071 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 185 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 25, 113 |
| Conread position: | 245-502 |
| Cow position: | chr7:27259552-27259819 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 184 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 253-596 |
| Cow position: | chr7:46244459-46244133 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 239 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 239, 0 |
| Conread position: | 255-591 |
| Cow position: | chr7:936043-935711 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 216, 41 |
| Conread position: | 256-414 |
| Cow position: | chr7:37935905-37935748 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 119 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 125, 0 |
| Conread position: | 256-495 |
| Cow position: | chr7:18103608-18103366 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 179 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 190, 182 |
| Conread position: | 256-594 |
| Cow position: | chr7:6010374-6010696 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 240 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 5, 241 |
| Conread position: | 258-495 |
| Cow position: | chr7:18109555-18109331 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 169, 0 |
| Conread position: | 258-495 |
| Cow position: | chr7:52897462-52897229 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 176 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 259-495 |
| Cow position: | chr7:2411381-2411617 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 172 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 259-495 |
| Cow position: | chr7:9438134-9437896 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 172 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 215, 74 |
| Conread position: | 259-495 |
| Cow position: | chr7:16632658-16632423 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 171 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 18, 86 |
| Conread position: | 259-495 |
| Cow position: | chr7:50562723-50562485 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 178 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 172, 0 |
| Conread position: | 259-505 |
| Cow position: | chr7:61215594-61215347 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 185 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 37, 44 |
| Conread position: | 259-590 |
| Cow position: | chr7:14318940-14319252 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 238, 0 |
| Conread position: | 259-594 |
| Cow position: | chr7:28434289-28433973 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 44 |
| Conread position: | 260-412 |
| Cow position: | chr7:14387294-14387446 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 260-495 |
| Cow position: | chr7:65172585-65172360 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 260-501 |
| Cow position: | chr7:51496997-51496752 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 183 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 18, 123 |
| Conread position: | 267-417 |
| Cow position: | chr7:52433804-52433954 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 114 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 268-474 |
| Cow position: | chr7:49095346-49095140 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 72, 202 |
| Conread position: | 268-485 |
| Cow position: | chr7:461268-461481 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 107, 0 |
| Conread position: | 268-494 |
| Cow position: | chr7:3664684-3664459 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 169 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 122, 76 |
| Conread position: | 268-495 |
| Cow position: | chr7:8333929-8333702 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 169 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 136, 196 |
| Conread position: | 268-495 |
| Cow position: | chr7:10726724-10726501 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 107, 0 |
| Conread position: | 268-495 |
| Cow position: | chr7:13840578-13840798 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 173 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 14, 170 |
| Conread position: | 268-495 |
| Cow position: | chr7:16649239-16649464 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 167 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 22, 147 |
| Conread position: | 268-495 |
| Cow position: | chr7:19655253-19655480 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 173 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 268-495 |
| Cow position: | chr7:27265202-27265429 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 168 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 268-495 |
| Cow position: | chr7:32817014-32817241 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 175 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 268-495 |
| Cow position: | chr7:40523407-40523181 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 171 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 99, 0 |
| Conread position: | 268-495 |
| Cow position: | chr7:41789758-41789532 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 177 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 130, 0 |
| Conread position: | 268-495 |
| Cow position: | chr7:42905889-42906117 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 172, 0 |
| Conread position: | 268-495 |
| Cow position: | chr7:56929590-56929817 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 175 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 268-594 |
| Cow position: | chr7:10479496-10479818 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 242, 45 |
| Conread position: | 268-594 |
| Cow position: | chr7:10906247-10906573 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 211, 207 |
| Conread position: | 268-594 |
| Cow position: | chr7:14861155-14861480 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 264 |
| Conread position: | 268-595 |
| Cow position: | chr7:30949695-30950006 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 231 |
| Conread position: | 268-596 |
| Cow position: | chr7:1846989-1846679 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 224, 0 |
| Conread position: | 268-633 |
| Cow position: | chr7:1438738-1439087 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 259 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 14, 137 |
| Conread position: | 268-635 |
| Cow position: | chr7:37784042-37783693 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 258 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 31, 48 |
| Conread position: | 268-635 |
| Cow position: | chr7:66941294-66941646 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 334, 120 |
| Conread position: | 268-639 |
| Cow position: | chr7:50806131-50805769 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 277 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 31, 27 |
| Conread position: | 269-495 |
| Cow position: | chr7:40498202-40497977 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 173 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 269-495 |
| Cow position: | chr7:63711594-63711368 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 172 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 269-635 |
| Cow position: | chr7:5993261-5993612 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 250 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 327, 40 |
| Conread position: | 270-502 |
| Cow position: | chr7:8254373-8254141 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 174 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 226, 159 |
| Conread position: | 271-495 |
| Cow position: | chr7:16631346-16631123 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 59, 74 |
| Conread position: | 271-495 |
| Cow position: | chr7:43355384-43355161 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 28, 76 |
| Conread position: | 271-635 |
| Cow position: | chr7:3872498-3872849 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 325, 225 |
| Conread position: | 272-595 |
| Cow position: | chr7:13419787-13420091 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 157, 0 |
| Conread position: | 273-495 |
| Cow position: | chr7:41081220-41080998 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 171 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 21, 29 |
| Conread position: | 277-495 |
| Cow position: | chr7:7870807-7871023 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 164 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 22, 68 |
| Conread position: | 281-643 |
| Cow position: | chr7:2992980-2993326 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 254 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 19, 64 |
| Conread position: | 286-495 |
| Cow position: | chr7:61968942-61969148 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 128, 0 |
| Conread position: | 298-490 |
| Cow position: | chr7:21992251-21992059 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 142 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 303-635 |
| Cow position: | chr7:40542467-40542151 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 231 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 148, 195 |
| Conread position: | 313-502 |
| Cow position: | chr7:19665301-19665489 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 329-641 |
| Cow position: | chr7:3657567-3657269 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 224 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 56, 168 |
Show alignments to all cow chromosomes.