Cow genome map
| Conread name: | Liv1-LVRM10158G02 |
| Conread position: | 238-495 |
| Cow position: | chr8:47894005-47893748 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 189 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 5, 64 |
| Conread position: | 248-494 |
| Cow position: | chr8:52143216-52142971 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 182 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 253-495 |
| Cow position: | chr8:45301758-45301513 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 181 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 254-590 |
| Cow position: | chr8:26830689-26830370 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 237 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 238, 0 |
| Conread position: | 256-424 |
| Cow position: | chr8:4464270-4464102 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 129 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 256-429 |
| Cow position: | chr8:26824692-26824519 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 126 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 256-462 |
| Cow position: | chr8:18497283-18497489 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 155 |
| Alignm E-value: | 8.99999e-40 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 256-594 |
| Cow position: | chr8:39625446-39625765 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 0 |
| Conread position: | 258-494 |
| Cow position: | chr8:32259118-32259354 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 182 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 259-466 |
| Cow position: | chr8:32449606-32449807 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 148 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 145, 0 |
| Conread position: | 259-474 |
| Cow position: | chr8:8681433-8681218 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 161 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 259-495 |
| Cow position: | chr8:24287829-24288066 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 180 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 139, 0 |
| Conread position: | 259-495 |
| Cow position: | chr8:44477456-44477691 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 172 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 125, 0 |
| Conread position: | 259-495 |
| Cow position: | chr8:49244011-49243779 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 180 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 172, 0 |
| Conread position: | 259-495 |
| Cow position: | chr8:54002414-54002649 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 178 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 259-502 |
| Cow position: | chr8:37682521-37682276 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 179 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 218, 0 |
| Conread position: | 260-495 |
| Cow position: | chr8:39791688-39791451 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 176 |
| Alignm E-value: | 8.99999e-40 |
| Alignm gaps (pig, cow): | 18, 88 |
| Conread position: | 260-592 |
| Cow position: | chr8:10138891-10139205 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 238 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 237, 0 |
| Conread position: | 260-635 |
| Cow position: | chr8:51965336-51964976 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 264 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 334, 188 |
| Conread position: | 267-594 |
| Cow position: | chr8:45115153-45114824 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 245, 0 |
| Conread position: | 268-493 |
| Cow position: | chr8:8708147-8707925 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 163 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 93, 56 |
| Conread position: | 268-494 |
| Cow position: | chr8:19874675-19874901 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 176 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 268-495 |
| Cow position: | chr8:1364914-1364686 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 171 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 34, 28 |
| Conread position: | 268-495 |
| Cow position: | chr8:6688890-6689113 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 175 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 102, 0 |
| Conread position: | 268-495 |
| Cow position: | chr8:43059128-43058900 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 176 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 35 |
| Conread position: | 268-495 |
| Cow position: | chr8:52243400-52243625 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 268-495 |
| Cow position: | chr8:52574890-52574663 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 176 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 268-496 |
| Cow position: | chr8:21792075-21792303 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 178 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 268-499 |
| Cow position: | chr8:23120343-23120112 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 173 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 268-502 |
| Cow position: | chr8:7321889-7322124 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 172 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 228, 0 |
| Conread position: | 268-590 |
| Cow position: | chr8:54619852-54620151 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 226 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 14, 78 |
| Conread position: | 268-594 |
| Cow position: | chr8:5731617-5731312 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 136, 0 |
| Conread position: | 268-594 |
| Cow position: | chr8:36032088-36032391 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 234 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 268-635 |
| Cow position: | chr8:14054977-14054626 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 256 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 34, 21 |
| Conread position: | 268-635 |
| Cow position: | chr8:43051794-43051443 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 330, 117 |
| Conread position: | 268-639 |
| Cow position: | chr8:58328189-58327823 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 269, 9 |
| Conread position: | 269-494 |
| Cow position: | chr8:36079615-36079392 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 162 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 135, 0 |
| Conread position: | 269-495 |
| Cow position: | chr8:37721357-37721579 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 163 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 131, 0 |
| Conread position: | 269-590 |
| Cow position: | chr8:22179550-22179855 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 226 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 10, 229 |
| Conread position: | 270-596 |
| Cow position: | chr8:40094255-40093948 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 134, 13 |
| Conread position: | 273-594 |
| Cow position: | chr8:33520090-33520415 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 232, 190 |
| Conread position: | 298-504 |
| Cow position: | chr8:22495259-22495053 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 198, 104 |
| Conread position: | 304-594 |
| Cow position: | chr8:35906331-35906067 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 210 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 329-540 |
| Cow position: | chr8:32273430-32273644 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 142, 0 |
| Conread position: | 462-593 |
| Cow position: | chr8:33350869-33351003 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 43, 16 |
Show alignments to all cow chromosomes.