Cow genome map
| Conread name: | Liv1-LVRM10158G02 |
| Conread position: | 244-495 |
| Cow position: | chr9:15529031-15529283 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 183 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 244-502 |
| Cow position: | chr9:6668737-6668488 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 24, 60 |
| Conread position: | 254-400 |
| Cow position: | chr9:8563344-8563490 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 254-594 |
| Cow position: | chr9:61331744-61332085 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 234 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 48, 42 |
| Conread position: | 256-502 |
| Cow position: | chr9:18985603-18985355 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 186 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 46, 40 |
| Conread position: | 257-594 |
| Cow position: | chr9:54203163-54202831 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 278, 200 |
| Conread position: | 259-414 |
| Cow position: | chr9:19261539-19261694 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 259-602 |
| Cow position: | chr9:23526458-23526136 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 242 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 100, 0 |
| Conread position: | 260-494 |
| Cow position: | chr9:4855822-4856053 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 219, 17 |
| Conread position: | 261-597 |
| Cow position: | chr9:21516572-21516891 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 241 |
| Conread position: | 267-501 |
| Cow position: | chr9:36710230-36710464 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 181 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 32, 26 |
| Conread position: | 268-493 |
| Cow position: | chr9:15817074-15816848 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 170 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 32, 27 |
| Conread position: | 268-494 |
| Cow position: | chr9:64598929-64599150 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 174 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 268-495 |
| Cow position: | chr9:4618791-4619018 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 164 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 268-495 |
| Cow position: | chr9:7958113-7957889 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 174 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 268-495 |
| Cow position: | chr9:14340691-14340468 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 268-495 |
| Cow position: | chr9:23521177-23520951 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 170 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 180, 28 |
| Conread position: | 268-495 |
| Cow position: | chr9:28537467-28537240 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 169 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 268-495 |
| Cow position: | chr9:36467309-36467537 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 161 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 151, 0 |
| Conread position: | 268-495 |
| Cow position: | chr9:48548523-48548297 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 168 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 136, 0 |
| Conread position: | 268-496 |
| Cow position: | chr9:6601398-6601626 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 180 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 268-499 |
| Cow position: | chr9:64438270-64438042 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 178 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 268-502 |
| Cow position: | chr9:8487042-8486807 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 177 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 13, 97 |
| Conread position: | 268-502 |
| Cow position: | chr9:15816308-15816543 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 228, 0 |
| Conread position: | 268-507 |
| Cow position: | chr9:49295931-49295697 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 176 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 179, 160 |
| Conread position: | 268-590 |
| Cow position: | chr9:1892661-1892965 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 229, 0 |
| Conread position: | 268-590 |
| Cow position: | chr9:21861189-21860885 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 230 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 267, 219 |
| Conread position: | 268-590 |
| Cow position: | chr9:60489738-60489434 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 227, 0 |
| Conread position: | 268-593 |
| Cow position: | chr9:10572791-10573110 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 194, 76 |
| Conread position: | 268-596 |
| Cow position: | chr9:56833106-56832803 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 233 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 162, 0 |
| Conread position: | 268-635 |
| Cow position: | chr9:13539750-13540103 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 332, 229 |
| Conread position: | 269-495 |
| Cow position: | chr9:7661434-7661208 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 171 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 269-495 |
| Cow position: | chr9:40280091-40279867 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 169 |
| Alignm E-value: | 8.99999e-40 |
| Alignm gaps (pig, cow): | 27, 33 |
| Conread position: | 270-453 |
| Cow position: | chr9:54534240-54534421 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 270-523 |
| Cow position: | chr9:60030527-60030269 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 194 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 97, 14 |
| Conread position: | 271-596 |
| Cow position: | chr9:7841086-7841388 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 229 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 11, 48 |
| Conread position: | 271-624 |
| Cow position: | chr9:7532992-7532652 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 241 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 98, 222 |
| Conread position: | 277-490 |
| Cow position: | chr9:30655056-30654841 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 301-492 |
| Cow position: | chr9:53048468-53048659 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 328-495 |
| Cow position: | chr9:10675347-10675181 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 41, 13 |
| Conread position: | 395-639 |
| Cow position: | chr9:30698368-30698109 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 195 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 115, 0 |
Show alignments to all cow chromosomes.