Cow genome map
| Conread name: | Liv1-LVRM10158G02 |
| Conread position: | 237-495 |
| Cow position: | chrX:20-277 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 193 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 212, 187 |
| Conread position: | 244-635 |
| Cow position: | chrX:835202-834822 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 18 |
| Conread position: | 245-494 |
| Cow position: | chrX:10749381-10749132 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 184 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 11, 17 |
| Conread position: | 250-473 |
| Cow position: | chrX:46750932-46750709 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 23, 13 |
| Conread position: | 252-408 |
| Cow position: | chrX:36053567-36053723 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 255-541 |
| Cow position: | chrX:8448331-8448050 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 197 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 21, 7 |
| Conread position: | 256-504 |
| Cow position: | chrX:44682170-44681921 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 184 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 245, 0 |
| Conread position: | 256-590 |
| Cow position: | chrX:823941-823614 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 288 |
| Conread position: | 256-628 |
| Cow position: | chrX:9099903-9099546 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 262 |
| Alignm E-value: | 9.00054e-42 |
| Alignm gaps (pig, cow): | 44, 89 |
| Conread position: | 257-499 |
| Cow position: | chrX:38748954-38749194 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 182 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 217, 0 |
| Conread position: | 259-495 |
| Cow position: | chrX:16902567-16902332 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 176 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 145, 0 |
| Conread position: | 259-590 |
| Cow position: | chrX:833234-832921 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 239 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 23, 183 |
| Conread position: | 259-594 |
| Cow position: | chrX:29428702-29429009 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 242 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 102, 85 |
| Conread position: | 259-596 |
| Cow position: | chrX:2982-2664 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 237 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 126, 166 |
| Conread position: | 260-495 |
| Cow position: | chrX:28868442-28868678 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 173 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 18, 88 |
| Conread position: | 260-495 |
| Cow position: | chrX:39827516-39827750 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 215, 0 |
| Conread position: | 260-596 |
| Cow position: | chrX:34443237-34442922 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 243 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 39, 85 |
| Conread position: | 260-635 |
| Cow position: | chrX:42402757-42403120 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 265 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 18, 88 |
| Conread position: | 263-590 |
| Cow position: | chrX:9108534-9108227 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 231 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 37, 82 |
| Conread position: | 267-594 |
| Cow position: | chrX:25221037-25220709 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 238, 71 |
| Conread position: | 267-596 |
| Cow position: | chrX:32754448-32754118 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 235, 275 |
| Conread position: | 268-408 |
| Cow position: | chrX:29126626-29126766 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 268-428 |
| Cow position: | chrX:47121003-47121165 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 31, 25 |
| Conread position: | 268-492 |
| Cow position: | chrX:45419808-45420034 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 164 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 112, 0 |
| Conread position: | 268-495 |
| Cow position: | chrX:4543307-4543097 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 165 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 268-495 |
| Cow position: | chrX:9313404-9313186 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 31, 108 |
| Conread position: | 268-495 |
| Cow position: | chrX:13831115-13830877 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 171 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 71, 205 |
| Conread position: | 268-495 |
| Cow position: | chrX:15764633-15764404 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 174 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 170, 0 |
| Conread position: | 268-495 |
| Cow position: | chrX:18434891-18434671 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 268-502 |
| Cow position: | chrX:44615651-44615886 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 132, 0 |
| Conread position: | 268-590 |
| Cow position: | chrX:16795647-16795339 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 231 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 71, 157 |
| Conread position: | 268-590 |
| Cow position: | chrX:23430290-23430598 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 237 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 118, 139 |
| Conread position: | 268-590 |
| Cow position: | chrX:32753599-32753296 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 232 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 207, 0 |
| Conread position: | 268-611 |
| Cow position: | chrX:25266280-25266600 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 237 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 323, 70 |
| Conread position: | 268-624 |
| Cow position: | chrX:25272417-25272760 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 181, 230 |
| Conread position: | 268-635 |
| Cow position: | chrX:28562-28222 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 254 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 355, 163 |
| Conread position: | 268-635 |
| Cow position: | chrX:28874518-28874165 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 330, 229 |
| Conread position: | 268-639 |
| Cow position: | chrX:29531418-29531064 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 17 |
| Conread position: | 269-493 |
| Cow position: | chrX:43357994-43357778 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 209, 25 |
| Conread position: | 269-590 |
| Cow position: | chrX:27980752-27981055 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 228, 0 |
| Conread position: | 270-643 |
| Cow position: | chrX:32647496-32647137 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 332, 226 |
| Conread position: | 272-448 |
| Cow position: | chrX:44657167-44657336 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 27, 16 |
| Conread position: | 277-495 |
| Cow position: | chrX:48236438-48236221 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 156 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 127, 0 |
| Conread position: | 278-594 |
| Cow position: | chrX:35933792-35933492 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 221 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 117, 220 |
| Conread position: | 281-495 |
| Cow position: | chrX:16891342-16891550 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 160 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 302-589 |
| Cow position: | chrX:4853-5130 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 213 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 86, 31 |
| Conread position: | 311-594 |
| Cow position: | chrX:25951348-25951082 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 209 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 180, 0 |
Show alignments to all cow chromosomes.