Cow genome map
Conread name: | Liv1-LVRM10162A01 |
Conread position: | 4-287 |
Cow position: | chr10:29631988-29631696 (view UCSC Genome Browser custom track) |
Alignm length: | 295 |
Alignm identity: | 219 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 35, 270 |
Conread position: | 6-530 |
Cow position: | chr10:47907711-47908235 (view UCSC Genome Browser custom track) |
Alignm length: | 543 |
Alignm identity: | 384 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 32, 265 |
Conread position: | 31-323 |
Cow position: | chr10:26597433-26597720 (view UCSC Genome Browser custom track) |
Alignm length: | 293 |
Alignm identity: | 224 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 6, 0 |
Conread position: | 31-354 |
Cow position: | chr10:40151426-40151102 (view UCSC Genome Browser custom track) |
Alignm length: | 329 |
Alignm identity: | 258 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 285, 8 |
Conread position: | 31-487 |
Cow position: | chr10:28929129-28928704 (view UCSC Genome Browser custom track) |
Alignm length: | 458 |
Alignm identity: | 317 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 345, 6 |
Conread position: | 31-531 |
Cow position: | chr10:38545092-38544623 (view UCSC Genome Browser custom track) |
Alignm length: | 503 |
Alignm identity: | 373 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 283, 6 |
Conread position: | 33-354 |
Cow position: | chr10:8290798-8291126 (view UCSC Genome Browser custom track) |
Alignm length: | 333 |
Alignm identity: | 263 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 81, 86 |
Conread position: | 33-354 |
Cow position: | chr10:11821567-11821896 (view UCSC Genome Browser custom track) |
Alignm length: | 332 |
Alignm identity: | 234 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 231 |
Conread position: | 33-355 |
Cow position: | chr10:19544558-19544238 (view UCSC Genome Browser custom track) |
Alignm length: | 325 |
Alignm identity: | 209 |
Alignm E-value: | 9e-30 |
Alignm gaps (pig, cow): | 297, 174 |
Conread position: | 33-527 |
Cow position: | chr10:186910-187393 (view UCSC Genome Browser custom track) |
Alignm length: | 508 |
Alignm identity: | 339 |
Alignm E-value: | 4.06377e-44 |
Alignm gaps (pig, cow): | 82, 124 |
Conread position: | 33-530 |
Cow position: | chr10:22102058-22102538 (view UCSC Genome Browser custom track) |
Alignm length: | 502 |
Alignm identity: | 365 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 81, 43 |
Conread position: | 33-530 |
Cow position: | chr10:29845828-29845344 (view UCSC Genome Browser custom track) |
Alignm length: | 503 |
Alignm identity: | 386 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 81, 86 |
Conread position: | 33-532 |
Cow position: | chr10:19495460-19494984 (view UCSC Genome Browser custom track) |
Alignm length: | 506 |
Alignm identity: | 355 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 274, 110 |
Conread position: | 34-212 |
Cow position: | chr10:33348166-33348345 (view UCSC Genome Browser custom track) |
Alignm length: | 181 |
Alignm identity: | 154 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 31, 111 |
Conread position: | 34-326 |
Cow position: | chr10:11699064-11699353 (view UCSC Genome Browser custom track) |
Alignm length: | 293 |
Alignm identity: | 218 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 229, 0 |
Conread position: | 34-532 |
Cow position: | chr10:11684825-11684326 (view UCSC Genome Browser custom track) |
Alignm length: | 505 |
Alignm identity: | 350 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 205, 230 |
Conread position: | 34-532 |
Cow position: | chr10:16477577-16478064 (view UCSC Genome Browser custom track) |
Alignm length: | 513 |
Alignm identity: | 353 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 244, 77 |
Conread position: | 34-534 |
Cow position: | chr10:39779298-39778810 (view UCSC Genome Browser custom track) |
Alignm length: | 502 |
Alignm identity: | 366 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 294, 16 |
Conread position: | 34-534 |
Cow position: | chr10:50135382-50135878 (view UCSC Genome Browser custom track) |
Alignm length: | 516 |
Alignm identity: | 391 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 163, 204 |
Conread position: | 34-534 |
Cow position: | chr10:58597205-58597677 (view UCSC Genome Browser custom track) |
Alignm length: | 506 |
Alignm identity: | 342 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 77, 96 |
Conread position: | 35-532 |
Cow position: | chr10:29011830-29011349 (view UCSC Genome Browser custom track) |
Alignm length: | 506 |
Alignm identity: | 337 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 202, 55 |
Conread position: | 36-240 |
Cow position: | chr10:29101766-29101568 (view UCSC Genome Browser custom track) |
Alignm length: | 206 |
Alignm identity: | 143 |
Alignm E-value: | 4e-23 |
Alignm gaps (pig, cow): | 89, 60 |
Conread position: | 36-269 |
Cow position: | chr10:62408021-62407788 (view UCSC Genome Browser custom track) |
Alignm length: | 236 |
Alignm identity: | 186 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 78, 83 |
Conread position: | 36-280 |
Cow position: | chr10:4190990-4190749 (view UCSC Genome Browser custom track) |
Alignm length: | 245 |
Alignm identity: | 185 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 204, 0 |
Conread position: | 36-282 |
Cow position: | chr10:21731025-21730781 (view UCSC Genome Browser custom track) |
Alignm length: | 248 |
Alignm identity: | 184 |
Alignm E-value: | 9.80909e-45 |
Alignm gaps (pig, cow): | 201, 178 |
Conread position: | 36-289 |
Cow position: | chr10:7274594-7274845 (view UCSC Genome Browser custom track) |
Alignm length: | 254 |
Alignm identity: | 185 |
Alignm E-value: | 9.80909e-45 |
Alignm gaps (pig, cow): | 227, 0 |
Conread position: | 36-306 |
Cow position: | chr10:39815716-39815447 (view UCSC Genome Browser custom track) |
Alignm length: | 272 |
Alignm identity: | 192 |
Alignm E-value: | 9.99967e-42 |
Alignm gaps (pig, cow): | 201, 224 |
Conread position: | 36-316 |
Cow position: | chr10:125215-125492 (view UCSC Genome Browser custom track) |
Alignm length: | 282 |
Alignm identity: | 221 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 78, 83 |
Conread position: | 36-326 |
Cow position: | chr10:7281265-7280982 (view UCSC Genome Browser custom track) |
Alignm length: | 292 |
Alignm identity: | 231 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 78, 98 |
Conread position: | 36-346 |
Cow position: | chr10:21487744-21488047 (view UCSC Genome Browser custom track) |
Alignm length: | 314 |
Alignm identity: | 240 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 78, 83 |
Conread position: | 36-355 |
Cow position: | chr10:47083946-47083626 (view UCSC Genome Browser custom track) |
Alignm length: | 323 |
Alignm identity: | 233 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 290, 227 |
Conread position: | 36-476 |
Cow position: | chr10:34286080-34286508 (view UCSC Genome Browser custom track) |
Alignm length: | 445 |
Alignm identity: | 316 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 290, 227 |
Conread position: | 36-526 |
Cow position: | chr10:41877739-41878220 (view UCSC Genome Browser custom track) |
Alignm length: | 499 |
Alignm identity: | 353 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 17, 24 |
Conread position: | 36-529 |
Cow position: | chr10:279785-279307 (view UCSC Genome Browser custom track) |
Alignm length: | 497 |
Alignm identity: | 359 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 273, 227 |
Conread position: | 36-529 |
Cow position: | chr10:2120189-2119713 (view UCSC Genome Browser custom track) |
Alignm length: | 499 |
Alignm identity: | 376 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 78, 67 |
Conread position: | 36-530 |
Cow position: | chr10:1378329-1378801 (view UCSC Genome Browser custom track) |
Alignm length: | 501 |
Alignm identity: | 385 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 78, 83 |
Conread position: | 36-530 |
Cow position: | chr10:19840503-19840984 (view UCSC Genome Browser custom track) |
Alignm length: | 500 |
Alignm identity: | 353 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 273, 227 |
Conread position: | 36-530 |
Cow position: | chr10:21739927-21739446 (view UCSC Genome Browser custom track) |
Alignm length: | 499 |
Alignm identity: | 360 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 290, 223 |
Conread position: | 36-530 |
Cow position: | chr10:27664442-27663965 (view UCSC Genome Browser custom track) |
Alignm length: | 498 |
Alignm identity: | 365 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 271, 227 |
Conread position: | 36-530 |
Cow position: | chr10:28642356-28642838 (view UCSC Genome Browser custom track) |
Alignm length: | 499 |
Alignm identity: | 353 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 283, 227 |
Conread position: | 36-530 |
Cow position: | chr10:30684690-30684191 (view UCSC Genome Browser custom track) |
Alignm length: | 506 |
Alignm identity: | 366 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 78, 86 |
Conread position: | 36-530 |
Cow position: | chr10:38344537-38344058 (view UCSC Genome Browser custom track) |
Alignm length: | 499 |
Alignm identity: | 374 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 78, 98 |
Conread position: | 36-530 |
Cow position: | chr10:39040482-39039994 (view UCSC Genome Browser custom track) |
Alignm length: | 501 |
Alignm identity: | 367 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 78, 26 |
Conread position: | 36-530 |
Cow position: | chr10:41567922-41568402 (view UCSC Genome Browser custom track) |
Alignm length: | 499 |
Alignm identity: | 358 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 278, 227 |
Conread position: | 36-530 |
Cow position: | chr10:55094089-55094571 (view UCSC Genome Browser custom track) |
Alignm length: | 499 |
Alignm identity: | 368 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 283, 223 |
Conread position: | 36-532 |
Cow position: | chr10:1665710-1665226 (view UCSC Genome Browser custom track) |
Alignm length: | 503 |
Alignm identity: | 356 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 283, 30 |
Conread position: | 36-532 |
Cow position: | chr10:14804657-14805151 (view UCSC Genome Browser custom track) |
Alignm length: | 512 |
Alignm identity: | 362 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 171, 236 |
Conread position: | 36-532 |
Cow position: | chr10:39180612-39181101 (view UCSC Genome Browser custom track) |
Alignm length: | 500 |
Alignm identity: | 348 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 289, 204 |
Conread position: | 36-534 |
Cow position: | chr10:29110318-29109837 (view UCSC Genome Browser custom track) |
Alignm length: | 503 |
Alignm identity: | 367 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 310, 125 |
Conread position: | 37-530 |
Cow position: | chr10:16926358-16926834 (view UCSC Genome Browser custom track) |
Alignm length: | 501 |
Alignm identity: | 375 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 77, 82 |
Conread position: | 40-530 |
Cow position: | chr10:14335022-14334544 (view UCSC Genome Browser custom track) |
Alignm length: | 496 |
Alignm identity: | 383 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 86, 94 |
Conread position: | 40-530 |
Cow position: | chr10:32701557-32702029 (view UCSC Genome Browser custom track) |
Alignm length: | 496 |
Alignm identity: | 372 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 86, 22 |
Conread position: | 40-530 |
Cow position: | chr10:38537670-38537195 (view UCSC Genome Browser custom track) |
Alignm length: | 497 |
Alignm identity: | 364 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 74, 79 |
Conread position: | 43-530 |
Cow position: | chr10:57556510-57556034 (view UCSC Genome Browser custom track) |
Alignm length: | 493 |
Alignm identity: | 349 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 272, 220 |
Conread position: | 44-532 |
Cow position: | chr10:41158272-41158752 (view UCSC Genome Browser custom track) |
Alignm length: | 498 |
Alignm identity: | 343 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 193, 225 |
Conread position: | 58-522 |
Cow position: | chr10:3542218-3541780 (view UCSC Genome Browser custom track) |
Alignm length: | 470 |
Alignm identity: | 335 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 258, 35 |
Conread position: | 69-484 |
Cow position: | chr10:14862541-14862939 (view UCSC Genome Browser custom track) |
Alignm length: | 422 |
Alignm identity: | 309 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 61, 28 |
Conread position: | 118-534 |
Cow position: | chr10:17433250-17433662 (view UCSC Genome Browser custom track) |
Alignm length: | 422 |
Alignm identity: | 315 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 128, 214 |
Conread position: | 120-534 |
Cow position: | chr10:64145838-64146235 (view UCSC Genome Browser custom track) |
Alignm length: | 420 |
Alignm identity: | 305 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 198, 29 |
Conread position: | 215-533 |
Cow position: | chr10:60360895-60361202 (view UCSC Genome Browser custom track) |
Alignm length: | 326 |
Alignm identity: | 232 |
Alignm E-value: | 8.99999e-40 |
Alignm gaps (pig, cow): | 94, 13 |
Conread position: | 230-532 |
Cow position: | chr10:20375815-20375528 (view UCSC Genome Browser custom track) |
Alignm length: | 308 |
Alignm identity: | 228 |
Alignm E-value: | 9.94922e-44 |
Alignm gaps (pig, cow): | 89, 38 |
Conread position: | 284-534 |
Cow position: | chr10:55285014-55285267 (view UCSC Genome Browser custom track) |
Alignm length: | 256 |
Alignm identity: | 178 |
Alignm E-value: | 1e-31 |
Alignm gaps (pig, cow): | 24, 78 |
Conread position: | 375-532 |
Cow position: | chr10:20382862-20382715 (view UCSC Genome Browser custom track) |
Alignm length: | 158 |
Alignm identity: | 121 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 29, 0 |
Show alignments to all cow chromosomes.