Cow genome map

Conread name: Liv1-LVRM10162A01

Conread position: 4-287
Cow position: chr10:29631988-29631696 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 270

Conread position: 6-530
Cow position: chr10:47907711-47908235 (view UCSC Genome Browser custom track)
Alignm length: 543
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 265

Conread position: 31-323
Cow position: chr10:26597433-26597720 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 0

Conread position: 31-354
Cow position: chr10:40151426-40151102 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 285, 8

Conread position: 31-487
Cow position: chr10:28929129-28928704 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 345, 6

Conread position: 31-531
Cow position: chr10:38545092-38544623 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 283, 6

Conread position: 33-354
Cow position: chr10:8290798-8291126 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 86

Conread position: 33-354
Cow position: chr10:11821567-11821896 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 231

Conread position: 33-355
Cow position: chr10:19544558-19544238 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 209
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 297, 174

Conread position: 33-527
Cow position: chr10:186910-187393 (view UCSC Genome Browser custom track)
Alignm length: 508
Alignm identity: 339
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 82, 124

Conread position: 33-530
Cow position: chr10:22102058-22102538 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 43

Conread position: 33-530
Cow position: chr10:29845828-29845344 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 86

Conread position: 33-532
Cow position: chr10:19495460-19494984 (view UCSC Genome Browser custom track)
Alignm length: 506
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 274, 110

Conread position: 34-212
Cow position: chr10:33348166-33348345 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 154
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 111

Conread position: 34-326
Cow position: chr10:11699064-11699353 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 229, 0

Conread position: 34-532
Cow position: chr10:11684825-11684326 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 205, 230

Conread position: 34-532
Cow position: chr10:16477577-16478064 (view UCSC Genome Browser custom track)
Alignm length: 513
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 244, 77

Conread position: 34-534
Cow position: chr10:39779298-39778810 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 294, 16

Conread position: 34-534
Cow position: chr10:50135382-50135878 (view UCSC Genome Browser custom track)
Alignm length: 516
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 204

Conread position: 34-534
Cow position: chr10:58597205-58597677 (view UCSC Genome Browser custom track)
Alignm length: 506
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 96

Conread position: 35-532
Cow position: chr10:29011830-29011349 (view UCSC Genome Browser custom track)
Alignm length: 506
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 202, 55

Conread position: 36-240
Cow position: chr10:29101766-29101568 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 143
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 89, 60

Conread position: 36-269
Cow position: chr10:62408021-62407788 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 83

Conread position: 36-280
Cow position: chr10:4190990-4190749 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 204, 0

Conread position: 36-282
Cow position: chr10:21731025-21730781 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 184
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 201, 178

Conread position: 36-289
Cow position: chr10:7274594-7274845 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 185
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 227, 0

Conread position: 36-306
Cow position: chr10:39815716-39815447 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 192
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 201, 224

Conread position: 36-316
Cow position: chr10:125215-125492 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 83

Conread position: 36-326
Cow position: chr10:7281265-7280982 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 98

Conread position: 36-346
Cow position: chr10:21487744-21488047 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 83

Conread position: 36-355
Cow position: chr10:47083946-47083626 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 290, 227

Conread position: 36-476
Cow position: chr10:34286080-34286508 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 290, 227

Conread position: 36-526
Cow position: chr10:41877739-41878220 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 24

Conread position: 36-529
Cow position: chr10:279785-279307 (view UCSC Genome Browser custom track)
Alignm length: 497
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 273, 227

Conread position: 36-529
Cow position: chr10:2120189-2119713 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 67

Conread position: 36-530
Cow position: chr10:1378329-1378801 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 83

Conread position: 36-530
Cow position: chr10:19840503-19840984 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 273, 227

Conread position: 36-530
Cow position: chr10:21739927-21739446 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 290, 223

Conread position: 36-530
Cow position: chr10:27664442-27663965 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 227

Conread position: 36-530
Cow position: chr10:28642356-28642838 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 283, 227

Conread position: 36-530
Cow position: chr10:30684690-30684191 (view UCSC Genome Browser custom track)
Alignm length: 506
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 86

Conread position: 36-530
Cow position: chr10:38344537-38344058 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 98

Conread position: 36-530
Cow position: chr10:39040482-39039994 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 26

Conread position: 36-530
Cow position: chr10:41567922-41568402 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 278, 227

Conread position: 36-530
Cow position: chr10:55094089-55094571 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 283, 223

Conread position: 36-532
Cow position: chr10:1665710-1665226 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 283, 30

Conread position: 36-532
Cow position: chr10:14804657-14805151 (view UCSC Genome Browser custom track)
Alignm length: 512
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 171, 236

Conread position: 36-532
Cow position: chr10:39180612-39181101 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 289, 204

Conread position: 36-534
Cow position: chr10:29110318-29109837 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 310, 125

Conread position: 37-530
Cow position: chr10:16926358-16926834 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 82

Conread position: 40-530
Cow position: chr10:14335022-14334544 (view UCSC Genome Browser custom track)
Alignm length: 496
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 94

Conread position: 40-530
Cow position: chr10:32701557-32702029 (view UCSC Genome Browser custom track)
Alignm length: 496
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 22

Conread position: 40-530
Cow position: chr10:38537670-38537195 (view UCSC Genome Browser custom track)
Alignm length: 497
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 79

Conread position: 43-530
Cow position: chr10:57556510-57556034 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 272, 220

Conread position: 44-532
Cow position: chr10:41158272-41158752 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 225

Conread position: 58-522
Cow position: chr10:3542218-3541780 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 258, 35

Conread position: 69-484
Cow position: chr10:14862541-14862939 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 28

Conread position: 118-534
Cow position: chr10:17433250-17433662 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 214

Conread position: 120-534
Cow position: chr10:64145838-64146235 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 198, 29

Conread position: 215-533
Cow position: chr10:60360895-60361202 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 232
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 94, 13

Conread position: 230-532
Cow position: chr10:20375815-20375528 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 228
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 89, 38

Conread position: 284-534
Cow position: chr10:55285014-55285267 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 178
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 24, 78

Conread position: 375-532
Cow position: chr10:20382862-20382715 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 121
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 29, 0

Show alignments to all cow chromosomes.