Cow genome map
| Conread name: | Liv1-LVRM10162A01 |
| Conread position: | 4-529 |
| Cow position: | chr13:6667633-6667123 (view UCSC Genome Browser custom track) |
| Alignm length: | 533 |
| Alignm identity: | 386 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 41 |
| Conread position: | 6-293 |
| Cow position: | chr13:677506-677800 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 214 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 32, 142 |
| Conread position: | 6-532 |
| Cow position: | chr13:47229516-47228986 (view UCSC Genome Browser custom track) |
| Alignm length: | 546 |
| Alignm identity: | 394 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 267 |
| Conread position: | 7-341 |
| Cow position: | chr13:34029902-34030245 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 110 |
| Conread position: | 7-534 |
| Cow position: | chr13:9045273-9045780 (view UCSC Genome Browser custom track) |
| Alignm length: | 538 |
| Alignm identity: | 401 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 116 |
| Conread position: | 33-238 |
| Cow position: | chr13:48358234-48358435 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 163 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 33-355 |
| Cow position: | chr13:3056610-3056287 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 293, 230 |
| Conread position: | 33-392 |
| Cow position: | chr13:28670734-28670380 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 285, 13 |
| Conread position: | 33-531 |
| Cow position: | chr13:13900395-13900878 (view UCSC Genome Browser custom track) |
| Alignm length: | 504 |
| Alignm identity: | 380 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 54 |
| Conread position: | 33-533 |
| Cow position: | chr13:16254854-16254372 (view UCSC Genome Browser custom track) |
| Alignm length: | 506 |
| Alignm identity: | 372 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 285, 36 |
| Conread position: | 34-295 |
| Cow position: | chr13:34910339-34910083 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 193 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 194, 0 |
| Conread position: | 34-303 |
| Cow position: | chr13:30238769-30239030 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 200 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 34-354 |
| Cow position: | chr13:20541513-20541205 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 34-459 |
| Cow position: | chr13:34765922-34765521 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 34-482 |
| Cow position: | chr13:34424288-34424724 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 292, 229 |
| Conread position: | 34-533 |
| Cow position: | chr13:57024224-57024706 (view UCSC Genome Browser custom track) |
| Alignm length: | 505 |
| Alignm identity: | 360 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 202 |
| Conread position: | 34-534 |
| Cow position: | chr13:5625468-5624973 (view UCSC Genome Browser custom track) |
| Alignm length: | 510 |
| Alignm identity: | 372 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 39 |
| Conread position: | 34-534 |
| Cow position: | chr13:43982560-43982089 (view UCSC Genome Browser custom track) |
| Alignm length: | 506 |
| Alignm identity: | 379 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 284, 29 |
| Conread position: | 36-257 |
| Cow position: | chr13:31730346-31730125 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 176 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 82 |
| Conread position: | 36-279 |
| Cow position: | chr13:23002777-23002528 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 192 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 78, 20 |
| Conread position: | 36-293 |
| Cow position: | chr13:30244152-30243898 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 192 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 192, 0 |
| Conread position: | 36-312 |
| Cow position: | chr13:33335781-33335511 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 31 |
| Conread position: | 36-312 |
| Cow position: | chr13:58118381-58118107 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 223, 0 |
| Conread position: | 36-524 |
| Cow position: | chr13:32737295-32736821 (view UCSC Genome Browser custom track) |
| Alignm length: | 494 |
| Alignm identity: | 377 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 83 |
| Conread position: | 36-529 |
| Cow position: | chr13:2388286-2387799 (view UCSC Genome Browser custom track) |
| Alignm length: | 495 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 424, 227 |
| Conread position: | 36-529 |
| Cow position: | chr13:32545909-32546399 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 368 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 83 |
| Conread position: | 36-530 |
| Cow position: | chr13:1592623-1592144 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 371 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 83 |
| Conread position: | 36-530 |
| Cow position: | chr13:3653791-3653309 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 388 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 83 |
| Conread position: | 36-530 |
| Cow position: | chr13:4484326-4484799 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 371 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 83 |
| Conread position: | 36-530 |
| Cow position: | chr13:4941918-4942393 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 375 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 81 |
| Conread position: | 36-530 |
| Cow position: | chr13:15519978-15519511 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 363 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 83 |
| Conread position: | 36-530 |
| Cow position: | chr13:15923851-15923372 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 380 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 83 |
| Conread position: | 36-530 |
| Cow position: | chr13:17309001-17309479 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 360 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 290, 227 |
| Conread position: | 36-530 |
| Cow position: | chr13:30303812-30304304 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 364 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 83 |
| Conread position: | 36-530 |
| Cow position: | chr13:31611776-31611300 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 379 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 25 |
| Conread position: | 36-530 |
| Cow position: | chr13:34041805-34041328 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 378 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 98 |
| Conread position: | 36-530 |
| Cow position: | chr13:34325031-34324545 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 385 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 273, 227 |
| Conread position: | 36-530 |
| Cow position: | chr13:42218396-42217902 (view UCSC Genome Browser custom track) |
| Alignm length: | 511 |
| Alignm identity: | 358 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 144, 239 |
| Conread position: | 36-530 |
| Cow position: | chr13:49974205-49974674 (view UCSC Genome Browser custom track) |
| Alignm length: | 498 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 281, 235 |
| Conread position: | 43-438 |
| Cow position: | chr13:52646340-52645958 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 283, 220 |
| Conread position: | 43-530 |
| Cow position: | chr13:21839664-21839184 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 355 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 195, 221 |
| Conread position: | 43-530 |
| Cow position: | chr13:32984815-32984333 (view UCSC Genome Browser custom track) |
| Alignm length: | 491 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 65 |
| Conread position: | 43-530 |
| Cow position: | chr13:60466864-60467337 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 283, 75 |
| Conread position: | 44-530 |
| Cow position: | chr13:50109988-50110462 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 16 |
| Conread position: | 45-534 |
| Cow position: | chr13:15450579-15450106 (view UCSC Genome Browser custom track) |
| Alignm length: | 495 |
| Alignm identity: | 363 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 273, 58 |
| Conread position: | 56-458 |
| Cow position: | chr13:26844577-26844948 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 285, 95 |
| Conread position: | 73-532 |
| Cow position: | chr13:11798145-11797707 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 253, 181 |
| Conread position: | 99-479 |
| Cow position: | chr13:30654789-30654420 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 217, 163 |
| Conread position: | 109-505 |
| Cow position: | chr13:34154159-34153773 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 206, 160 |
| Conread position: | 118-354 |
| Cow position: | chr13:34938075-34938310 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 190 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 209, 151 |
| Conread position: | 182-534 |
| Cow position: | chr13:43590006-43590344 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 134, 88 |
Show alignments to all cow chromosomes.