Cow genome map
| Conread name: | Liv1-LVRM10162A01 |
| Conread position: | 3-534 |
| Cow position: | chr14:33402050-33402580 (view UCSC Genome Browser custom track) |
| Alignm length: | 549 |
| Alignm identity: | 395 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 157 |
| Conread position: | 4-322 |
| Cow position: | chr14:44552252-44552566 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 34 |
| Conread position: | 4-532 |
| Cow position: | chr14:38531097-38530571 (view UCSC Genome Browser custom track) |
| Alignm length: | 545 |
| Alignm identity: | 397 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 168 |
| Conread position: | 6-445 |
| Cow position: | chr14:23257720-23258155 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 62 |
| Conread position: | 6-530 |
| Cow position: | chr14:12899463-12899981 (view UCSC Genome Browser custom track) |
| Alignm length: | 539 |
| Alignm identity: | 383 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 119 |
| Conread position: | 6-530 |
| Cow position: | chr14:22031067-22030560 (view UCSC Genome Browser custom track) |
| Alignm length: | 531 |
| Alignm identity: | 370 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 113 |
| Conread position: | 6-535 |
| Cow position: | chr14:750943-751455 (view UCSC Genome Browser custom track) |
| Alignm length: | 535 |
| Alignm identity: | 381 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 32 |
| Conread position: | 7-530 |
| Cow position: | chr14:48253937-48253429 (view UCSC Genome Browser custom track) |
| Alignm length: | 530 |
| Alignm identity: | 392 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 30 |
| Conread position: | 10-530 |
| Cow position: | chr14:13620784-13620256 (view UCSC Genome Browser custom track) |
| Alignm length: | 536 |
| Alignm identity: | 381 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 207 |
| Conread position: | 16-355 |
| Cow position: | chr14:5074350-5074689 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 85 |
| Conread position: | 31-314 |
| Cow position: | chr14:35365859-35365579 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 196 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 31-458 |
| Cow position: | chr14:17685797-17686211 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 88 |
| Conread position: | 31-529 |
| Cow position: | chr14:44689455-44689954 (view UCSC Genome Browser custom track) |
| Alignm length: | 509 |
| Alignm identity: | 369 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 6 |
| Conread position: | 31-534 |
| Cow position: | chr14:45711316-45710835 (view UCSC Genome Browser custom track) |
| Alignm length: | 508 |
| Alignm identity: | 375 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 6 |
| Conread position: | 33-464 |
| Cow position: | chr14:37455659-37455247 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 77 |
| Conread position: | 33-516 |
| Cow position: | chr14:45028602-45028121 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 356 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 158, 190 |
| Conread position: | 33-530 |
| Cow position: | chr14:12742667-12742183 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 374 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 86 |
| Conread position: | 33-534 |
| Cow position: | chr14:44775636-44775150 (view UCSC Genome Browser custom track) |
| Alignm length: | 507 |
| Alignm identity: | 359 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 46 |
| Conread position: | 34-245 |
| Cow position: | chr14:45161498-45161704 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 207, 22 |
| Conread position: | 34-279 |
| Cow position: | chr14:46401189-46401427 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 226, 41 |
| Conread position: | 34-305 |
| Cow position: | chr14:46465724-46465990 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 80 |
| Conread position: | 34-346 |
| Cow position: | chr14:12610852-12611164 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 97 |
| Conread position: | 34-348 |
| Cow position: | chr14:35385669-35385356 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 284, 66 |
| Conread position: | 34-350 |
| Cow position: | chr14:44131297-44131603 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 282, 65 |
| Conread position: | 34-454 |
| Cow position: | chr14:33237428-33237828 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 234, 129 |
| Conread position: | 34-524 |
| Cow position: | chr14:9100318-9099842 (view UCSC Genome Browser custom track) |
| Alignm length: | 496 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 181, 195 |
| Conread position: | 34-525 |
| Cow position: | chr14:44378203-44378678 (view UCSC Genome Browser custom track) |
| Alignm length: | 494 |
| Alignm identity: | 368 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 179, 128 |
| Conread position: | 34-529 |
| Cow position: | chr14:30595978-30595485 (view UCSC Genome Browser custom track) |
| Alignm length: | 512 |
| Alignm identity: | 364 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 243 |
| Conread position: | 34-529 |
| Cow position: | chr14:44581755-44582252 (view UCSC Genome Browser custom track) |
| Alignm length: | 504 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 130 |
| Conread position: | 34-529 |
| Cow position: | chr14:45081451-45081938 (view UCSC Genome Browser custom track) |
| Alignm length: | 504 |
| Alignm identity: | 365 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 273, 225 |
| Conread position: | 34-530 |
| Cow position: | chr14:33677465-33677953 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 365 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 88 |
| Conread position: | 34-533 |
| Cow position: | chr14:2294675-2295176 (view UCSC Genome Browser custom track) |
| Alignm length: | 509 |
| Alignm identity: | 354 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 271, 229 |
| Conread position: | 34-534 |
| Cow position: | chr14:17760477-17759991 (view UCSC Genome Browser custom track) |
| Alignm length: | 506 |
| Alignm identity: | 391 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 284, 127 |
| Conread position: | 34-534 |
| Cow position: | chr14:38147403-38147893 (view UCSC Genome Browser custom track) |
| Alignm length: | 510 |
| Alignm identity: | 364 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 243 |
| Conread position: | 34-534 |
| Cow position: | chr14:40341457-40341945 (view UCSC Genome Browser custom track) |
| Alignm length: | 509 |
| Alignm identity: | 387 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 275, 33 |
| Conread position: | 34-534 |
| Cow position: | chr14:44676520-44677000 (view UCSC Genome Browser custom track) |
| Alignm length: | 504 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 105, 75 |
| Conread position: | 34-534 |
| Cow position: | chr14:48825684-48826175 (view UCSC Genome Browser custom track) |
| Alignm length: | 508 |
| Alignm identity: | 372 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 160, 70 |
| Conread position: | 34-535 |
| Cow position: | chr14:11561626-11561135 (view UCSC Genome Browser custom track) |
| Alignm length: | 511 |
| Alignm identity: | 360 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 35 |
| Conread position: | 35-528 |
| Cow position: | chr14:13274005-13274492 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 360 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 129, 124 |
| Conread position: | 36-248 |
| Cow position: | chr14:45678923-45678714 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 148 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 36-352 |
| Cow position: | chr14:48404562-48404250 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 170, 100 |
| Conread position: | 36-458 |
| Cow position: | chr14:15275825-15275421 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 82 |
| Conread position: | 36-491 |
| Cow position: | chr14:45206726-45207151 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 151, 190 |
| Conread position: | 36-528 |
| Cow position: | chr14:11153759-11153269 (view UCSC Genome Browser custom track) |
| Alignm length: | 504 |
| Alignm identity: | 384 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 88 |
| Conread position: | 36-529 |
| Cow position: | chr14:17000656-17000174 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 376 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 83 |
| Conread position: | 36-530 |
| Cow position: | chr14:5529471-5529946 (view UCSC Genome Browser custom track) |
| Alignm length: | 505 |
| Alignm identity: | 380 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 83 |
| Conread position: | 36-530 |
| Cow position: | chr14:16272893-16272409 (view UCSC Genome Browser custom track) |
| Alignm length: | 505 |
| Alignm identity: | 382 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 83 |
| Conread position: | 36-530 |
| Cow position: | chr14:16919311-16918833 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 380 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 83 |
| Conread position: | 36-530 |
| Cow position: | chr14:17491056-17490574 (view UCSC Genome Browser custom track) |
| Alignm length: | 496 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 424, 227 |
| Conread position: | 36-530 |
| Cow position: | chr14:19327865-19327377 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 366 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 36 |
| Conread position: | 36-530 |
| Cow position: | chr14:20782865-20783340 (view UCSC Genome Browser custom track) |
| Alignm length: | 498 |
| Alignm identity: | 367 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 83 |
| Conread position: | 36-530 |
| Cow position: | chr14:30584553-30584067 (view UCSC Genome Browser custom track) |
| Alignm length: | 498 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 290, 209 |
| Conread position: | 36-530 |
| Cow position: | chr14:33393384-33392913 (view UCSC Genome Browser custom track) |
| Alignm length: | 498 |
| Alignm identity: | 355 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 290, 222 |
| Conread position: | 36-530 |
| Cow position: | chr14:37224594-37225076 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 385 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 83 |
| Conread position: | 36-530 |
| Cow position: | chr14:45671644-45671162 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 359 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 290, 223 |
| Conread position: | 36-530 |
| Cow position: | chr14:50111195-50111679 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 371 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 83 |
| Conread position: | 36-532 |
| Cow position: | chr14:9045978-9046466 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 411, 227 |
| Conread position: | 36-534 |
| Cow position: | chr14:50138968-50139455 (view UCSC Genome Browser custom track) |
| Alignm length: | 506 |
| Alignm identity: | 363 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 132, 24 |
| Conread position: | 37-322 |
| Cow position: | chr14:13461995-13462269 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 281, 45 |
| Conread position: | 37-354 |
| Cow position: | chr14:5512228-5512546 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 82 |
| Conread position: | 37-463 |
| Cow position: | chr14:190371-190785 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 73 |
| Conread position: | 37-530 |
| Cow position: | chr14:32447200-32447676 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 377 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 82 |
| Conread position: | 38-313 |
| Cow position: | chr14:45189373-45189100 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 210 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 241, 110 |
| Conread position: | 40-354 |
| Cow position: | chr14:29775808-29775492 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 267, 27 |
| Conread position: | 43-332 |
| Cow position: | chr14:44286841-44286555 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 91 |
| Conread position: | 43-332 |
| Cow position: | chr14:44288745-44288459 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 91 |
| Conread position: | 43-355 |
| Cow position: | chr14:33673831-33674135 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 216 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 172, 68 |
| Conread position: | 44-530 |
| Cow position: | chr14:2284749-2285213 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 263, 219 |
| Conread position: | 45-314 |
| Cow position: | chr14:47655718-47655982 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 190 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 104, 0 |
| Conread position: | 45-530 |
| Cow position: | chr14:7472774-7473235 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 354 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 60 |
| Conread position: | 47-199 |
| Cow position: | chr14:13303435-13303587 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 121 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 79, 87 |
| Conread position: | 50-342 |
| Cow position: | chr14:34776638-34776930 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 226 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 8, 46 |
| Conread position: | 53-534 |
| Cow position: | chr14:40169293-40168843 (view UCSC Genome Browser custom track) |
| Alignm length: | 488 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 255, 100 |
| Conread position: | 70-355 |
| Cow position: | chr14:30735416-30735697 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 213 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 101 |
| Conread position: | 358-534 |
| Cow position: | chr14:44552565-44552737 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 132 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 13, 50 |
| Conread position: | 375-532 |
| Cow position: | chr14:30735900-30736058 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 127 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 51, 29 |
Show alignments to all cow chromosomes.