Cow genome map

Conread name: Liv1-LVRM10162A01

Conread position: 4-412
Cow position: chr15:7934692-7935111 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 211

Conread position: 4-493
Cow position: chr15:36668099-36668599 (view UCSC Genome Browser custom track)
Alignm length: 518
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 87

Conread position: 6-243
Cow position: chr15:2589126-2588876 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 181
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 32, 0

Conread position: 8-327
Cow position: chr15:2763041-2763354 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 227
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 112, 49

Conread position: 31-169
Cow position: chr15:31862161-31862024 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 106
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 6, 0

Conread position: 31-226
Cow position: chr15:368771-368572 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 151
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 125, 6

Conread position: 31-329
Cow position: chr15:10889018-10889309 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 6

Conread position: 31-534
Cow position: chr15:6079153-6079636 (view UCSC Genome Browser custom track)
Alignm length: 514
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 6

Conread position: 33-202
Cow position: chr15:32516064-32515899 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 121
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 28, 0

Conread position: 33-226
Cow position: chr15:56886-57080 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 145
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 81, 105

Conread position: 33-347
Cow position: chr15:524455-524142 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 45

Conread position: 33-417
Cow position: chr15:35647265-35646880 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 283, 120

Conread position: 33-454
Cow position: chr15:17217857-17217451 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 288, 238

Conread position: 33-479
Cow position: chr15:7545280-7545694 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 208, 27

Conread position: 33-530
Cow position: chr15:4813002-4813486 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 276, 105

Conread position: 33-530
Cow position: chr15:4922553-4923031 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 23

Conread position: 33-530
Cow position: chr15:24295500-24295972 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 101

Conread position: 33-534
Cow position: chr15:3260916-3260431 (view UCSC Genome Browser custom track)
Alignm length: 507
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 86

Conread position: 34-179
Cow position: chr15:24717491-24717634 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 113
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 77, 0

Conread position: 34-254
Cow position: chr15:1300401-1300184 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 0

Conread position: 34-267
Cow position: chr15:4686002-4686233 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 173
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 20, 0

Conread position: 34-314
Cow position: chr15:8057700-8057968 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 200
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 134, 0

Conread position: 34-327
Cow position: chr15:6368552-6368256 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 225, 28

Conread position: 34-342
Cow position: chr15:1238083-1238396 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 272, 59

Conread position: 34-353
Cow position: chr15:579844-580164 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 184, 84

Conread position: 34-435
Cow position: chr15:9913092-9913489 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 177

Conread position: 34-528
Cow position: chr15:2925711-2926193 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 50

Conread position: 34-528
Cow position: chr15:28986629-28986153 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 196, 84

Conread position: 34-529
Cow position: chr15:11626096-11626572 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 24

Conread position: 34-529
Cow position: chr15:14581955-14581478 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 32

Conread position: 34-530
Cow position: chr15:17293481-17293934 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 77

Conread position: 34-531
Cow position: chr15:32720338-32719856 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 285, 99

Conread position: 34-532
Cow position: chr15:8750808-8751291 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 181, 38

Conread position: 34-534
Cow position: chr15:5980751-5981240 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 293, 229

Conread position: 34-534
Cow position: chr15:21450067-21450571 (view UCSC Genome Browser custom track)
Alignm length: 516
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 13

Conread position: 34-535
Cow position: chr15:7965544-7965068 (view UCSC Genome Browser custom track)
Alignm length: 506
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 259, 229

Conread position: 34-536
Cow position: chr15:4962041-4962529 (view UCSC Genome Browser custom track)
Alignm length: 506
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 335, 59

Conread position: 35-265
Cow position: chr15:51715336-51715563 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 179
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 25

Conread position: 35-489
Cow position: chr15:32693973-32694407 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 181, 25

Conread position: 35-534
Cow position: chr15:36625866-36625371 (view UCSC Genome Browser custom track)
Alignm length: 507
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 304, 101

Conread position: 36-243
Cow position: chr15:50147472-50147678 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 146
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 102, 0

Conread position: 36-304
Cow position: chr15:1518748-1518483 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 0

Conread position: 36-325
Cow position: chr15:32493979-32493692 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 83

Conread position: 36-326
Cow position: chr15:44829206-44829492 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 98

Conread position: 36-342
Cow position: chr15:53136815-53136508 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 84

Conread position: 36-397
Cow position: chr15:17079800-17079433 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 253
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 201, 114

Conread position: 36-458
Cow position: chr15:44070333-44070742 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 19

Conread position: 36-522
Cow position: chr15:18332421-18331949 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 63

Conread position: 36-528
Cow position: chr15:35752913-35752434 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 83

Conread position: 36-529
Cow position: chr15:4765582-4766069 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 98

Conread position: 36-529
Cow position: chr15:6471515-6471030 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 225, 64

Conread position: 36-529
Cow position: chr15:7837654-7838147 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 99

Conread position: 36-529
Cow position: chr15:8811619-8811138 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 83

Conread position: 36-530
Cow position: chr15:315450-314949 (view UCSC Genome Browser custom track)
Alignm length: 513
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 82

Conread position: 36-530
Cow position: chr15:1772903-1773385 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 31

Conread position: 36-530
Cow position: chr15:1782628-1783123 (view UCSC Genome Browser custom track)
Alignm length: 511
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 201, 328

Conread position: 36-530
Cow position: chr15:2647250-2646768 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 290, 227

Conread position: 36-530
Cow position: chr15:3009448-3008956 (view UCSC Genome Browser custom track)
Alignm length: 509
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 213, 261

Conread position: 36-530
Cow position: chr15:4142413-4141931 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 288, 223

Conread position: 36-530
Cow position: chr15:4196867-4197349 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 290, 227

Conread position: 36-530
Cow position: chr15:4386165-4386640 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 83

Conread position: 36-530
Cow position: chr15:6155538-6155058 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 98

Conread position: 36-530
Cow position: chr15:6553416-6552936 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 83

Conread position: 36-530
Cow position: chr15:6592212-6591730 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 72

Conread position: 36-530
Cow position: chr15:7261003-7261492 (view UCSC Genome Browser custom track)
Alignm length: 509
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 15

Conread position: 36-530
Cow position: chr15:15346707-15346226 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 26

Conread position: 36-530
Cow position: chr15:19737644-19737174 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 83

Conread position: 36-530
Cow position: chr15:20749795-20750278 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 283, 227

Conread position: 36-530
Cow position: chr15:21665340-21664856 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 61

Conread position: 36-530
Cow position: chr15:31359288-31359758 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 83

Conread position: 36-530
Cow position: chr15:50123537-50123047 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 200, 102

Conread position: 36-530
Cow position: chr15:51218009-51218485 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 83

Conread position: 36-531
Cow position: chr15:11597602-11597120 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 290, 204

Conread position: 36-531
Cow position: chr15:18577120-18577600 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 26

Conread position: 36-532
Cow position: chr15:28489743-28489258 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 317, 227

Conread position: 36-532
Cow position: chr15:51675126-51675605 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 25

Conread position: 36-534
Cow position: chr15:6067769-6067287 (view UCSC Genome Browser custom track)
Alignm length: 512
Alignm identity: 347
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 117, 65

Conread position: 38-354
Cow position: chr15:1668135-1668439 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 228
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 278, 36

Conread position: 38-524
Cow position: chr15:2016976-2017442 (view UCSC Genome Browser custom track)
Alignm length: 495
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 197, 204

Conread position: 40-526
Cow position: chr15:7234673-7235130 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 280, 89

Conread position: 43-355
Cow position: chr15:5952893-5952591 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 218
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 27, 55

Conread position: 43-534
Cow position: chr15:4671846-4672328 (view UCSC Genome Browser custom track)
Alignm length: 495
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 273, 217

Conread position: 44-204
Cow position: chr15:18030634-18030469 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 122
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 36, 0

Conread position: 45-536
Cow position: chr15:2801526-2801054 (view UCSC Genome Browser custom track)
Alignm length: 495
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 415, 84

Conread position: 47-536
Cow position: chr15:9430362-9430830 (view UCSC Genome Browser custom track)
Alignm length: 497
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 74

Conread position: 48-498
Cow position: chr15:25106826-25106387 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 289
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 259, 9

Conread position: 48-530
Cow position: chr15:8099888-8100355 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 62

Conread position: 49-296
Cow position: chr15:53313185-53313425 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 171
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 63, 73

Conread position: 50-201
Cow position: chr15:7785863-7785712 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 110
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 50-529
Cow position: chr15:6485007-6485466 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 176, 34

Conread position: 52-529
Cow position: chr15:2077077-2077541 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 69

Conread position: 53-534
Cow position: chr15:17148550-17149013 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 317, 199

Conread position: 65-456
Cow position: chr15:2902038-2901655 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 54

Conread position: 69-534
Cow position: chr15:6623656-6624098 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 249, 90

Conread position: 73-528
Cow position: chr15:31784350-31783916 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 307
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 186, 83

Conread position: 87-530
Cow position: chr15:22378360-22378791 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 237, 176

Conread position: 94-301
Cow position: chr15:21948784-21948579 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 154
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 169, 0

Conread position: 132-530
Cow position: chr15:32711726-32712111 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 187, 122

Conread position: 217-534
Cow position: chr15:36392553-36392263 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 234
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 99, 52

Conread position: 245-530
Cow position: chr15:58262-58542 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 197
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 98, 24

Conread position: 247-533
Cow position: chr15:24717951-24718230 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 211
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 15, 34

Conread position: 265-534
Cow position: chr15:1299929-1299668 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 93

Conread position: 381-530
Cow position: chr15:32493138-32492988 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 115
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 79, 0

Conread position: 387-533
Cow position: chr15:1851693-1851547 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 105
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.