Cow genome map
Conread name: | Liv1-LVRM10162A01 |
Conread position: | 4-534 |
Cow position: | chr16:49256200-49255682 (view UCSC Genome Browser custom track) |
Alignm length: | 548 |
Alignm identity: | 391 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 34, 232 |
Conread position: | 31-316 |
Cow position: | chr16:45798622-45798900 (view UCSC Genome Browser custom track) |
Alignm length: | 286 |
Alignm identity: | 205 |
Alignm E-value: | 4.2039e-45 |
Alignm gaps (pig, cow): | 6, 0 |
Conread position: | 31-324 |
Cow position: | chr16:25258004-25258302 (view UCSC Genome Browser custom track) |
Alignm length: | 302 |
Alignm identity: | 244 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 184, 6 |
Conread position: | 31-530 |
Cow position: | chr16:42736335-42735849 (view UCSC Genome Browser custom track) |
Alignm length: | 507 |
Alignm identity: | 374 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 39, 6 |
Conread position: | 33-458 |
Cow position: | chr16:51405876-51405484 (view UCSC Genome Browser custom track) |
Alignm length: | 428 |
Alignm identity: | 311 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 281, 33 |
Conread position: | 33-530 |
Cow position: | chr16:14665753-14665266 (view UCSC Genome Browser custom track) |
Alignm length: | 508 |
Alignm identity: | 388 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 57, 88 |
Conread position: | 33-530 |
Cow position: | chr16:25188707-25189191 (view UCSC Genome Browser custom track) |
Alignm length: | 502 |
Alignm identity: | 366 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 293, 230 |
Conread position: | 33-534 |
Cow position: | chr16:23670757-23671244 (view UCSC Genome Browser custom track) |
Alignm length: | 507 |
Alignm identity: | 355 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 275, 18 |
Conread position: | 34-199 |
Cow position: | chr16:49234600-49234435 (view UCSC Genome Browser custom track) |
Alignm length: | 166 |
Alignm identity: | 135 |
Alignm E-value: | 2e-40 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 34-203 |
Cow position: | chr16:23808498-23808662 (view UCSC Genome Browser custom track) |
Alignm length: | 170 |
Alignm identity: | 138 |
Alignm E-value: | 2e-38 |
Alignm gaps (pig, cow): | 127, 0 |
Conread position: | 34-250 |
Cow position: | chr16:47473559-47473776 (view UCSC Genome Browser custom track) |
Alignm length: | 218 |
Alignm identity: | 152 |
Alignm E-value: | 8e-31 |
Alignm gaps (pig, cow): | 30, 0 |
Conread position: | 34-309 |
Cow position: | chr16:39367321-39367044 (view UCSC Genome Browser custom track) |
Alignm length: | 279 |
Alignm identity: | 203 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 32, 232 |
Conread position: | 34-505 |
Cow position: | chr16:29034111-29034582 (view UCSC Genome Browser custom track) |
Alignm length: | 480 |
Alignm identity: | 365 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 286, 117 |
Conread position: | 34-529 |
Cow position: | chr16:37481067-37480598 (view UCSC Genome Browser custom track) |
Alignm length: | 502 |
Alignm identity: | 365 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 92, 56 |
Conread position: | 34-530 |
Cow position: | chr16:31591859-31591373 (view UCSC Genome Browser custom track) |
Alignm length: | 506 |
Alignm identity: | 386 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 92, 100 |
Conread position: | 34-532 |
Cow position: | chr16:18498229-18497756 (view UCSC Genome Browser custom track) |
Alignm length: | 503 |
Alignm identity: | 357 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 100, 150 |
Conread position: | 34-534 |
Cow position: | chr16:1432247-1432737 (view UCSC Genome Browser custom track) |
Alignm length: | 509 |
Alignm identity: | 378 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 230, 122 |
Conread position: | 34-534 |
Cow position: | chr16:16271079-16270587 (view UCSC Genome Browser custom track) |
Alignm length: | 510 |
Alignm identity: | 376 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 289, 59 |
Conread position: | 34-534 |
Cow position: | chr16:25085677-25086164 (view UCSC Genome Browser custom track) |
Alignm length: | 509 |
Alignm identity: | 378 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 181, 109 |
Conread position: | 34-534 |
Cow position: | chr16:37455951-37455454 (view UCSC Genome Browser custom track) |
Alignm length: | 511 |
Alignm identity: | 357 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 285, 53 |
Conread position: | 34-534 |
Cow position: | chr16:42185427-42184947 (view UCSC Genome Browser custom track) |
Alignm length: | 505 |
Alignm identity: | 334 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 294, 80 |
Conread position: | 34-538 |
Cow position: | chr16:51084200-51084703 (view UCSC Genome Browser custom track) |
Alignm length: | 513 |
Alignm identity: | 354 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 272, 33 |
Conread position: | 35-265 |
Cow position: | chr16:30049546-30049776 (view UCSC Genome Browser custom track) |
Alignm length: | 234 |
Alignm identity: | 185 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 91, 213 |
Conread position: | 36-163 |
Cow position: | chr16:15567097-15567224 (view UCSC Genome Browser custom track) |
Alignm length: | 130 |
Alignm identity: | 102 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 78, 83 |
Conread position: | 36-200 |
Cow position: | chr16:7463733-7463897 (view UCSC Genome Browser custom track) |
Alignm length: | 167 |
Alignm identity: | 130 |
Alignm E-value: | 3e-31 |
Alignm gaps (pig, cow): | 78, 83 |
Conread position: | 36-205 |
Cow position: | chr16:10203379-10203221 (view UCSC Genome Browser custom track) |
Alignm length: | 172 |
Alignm identity: | 129 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 78, 56 |
Conread position: | 36-243 |
Cow position: | chr16:49221862-49221663 (view UCSC Genome Browser custom track) |
Alignm length: | 208 |
Alignm identity: | 164 |
Alignm E-value: | 2.99878e-43 |
Alignm gaps (pig, cow): | 54, 0 |
Conread position: | 36-282 |
Cow position: | chr16:4302277-4302033 (view UCSC Genome Browser custom track) |
Alignm length: | 249 |
Alignm identity: | 181 |
Alignm E-value: | 7e-40 |
Alignm gaps (pig, cow): | 201, 23 |
Conread position: | 36-288 |
Cow position: | chr16:41166708-41166458 (view UCSC Genome Browser custom track) |
Alignm length: | 255 |
Alignm identity: | 199 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 78, 83 |
Conread position: | 36-305 |
Cow position: | chr16:28197615-28197346 (view UCSC Genome Browser custom track) |
Alignm length: | 272 |
Alignm identity: | 197 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 201, 229 |
Conread position: | 36-314 |
Cow position: | chr16:28377280-28377556 (view UCSC Genome Browser custom track) |
Alignm length: | 279 |
Alignm identity: | 212 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 204, 0 |
Conread position: | 36-325 |
Cow position: | chr16:46707304-46707017 (view UCSC Genome Browser custom track) |
Alignm length: | 290 |
Alignm identity: | 220 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 227, 0 |
Conread position: | 36-335 |
Cow position: | chr16:4305200-4304906 (view UCSC Genome Browser custom track) |
Alignm length: | 300 |
Alignm identity: | 217 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 23, 0 |
Conread position: | 36-342 |
Cow position: | chr16:2727225-2726920 (view UCSC Genome Browser custom track) |
Alignm length: | 311 |
Alignm identity: | 238 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 78, 51 |
Conread position: | 36-345 |
Cow position: | chr16:27733729-27733427 (view UCSC Genome Browser custom track) |
Alignm length: | 314 |
Alignm identity: | 246 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 75, 83 |
Conread position: | 36-351 |
Cow position: | chr16:34530375-34530701 (view UCSC Genome Browser custom track) |
Alignm length: | 329 |
Alignm identity: | 239 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 201, 230 |
Conread position: | 36-367 |
Cow position: | chr16:25457401-25457067 (view UCSC Genome Browser custom track) |
Alignm length: | 339 |
Alignm identity: | 265 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 78, 83 |
Conread position: | 36-511 |
Cow position: | chr16:28471039-28470579 (view UCSC Genome Browser custom track) |
Alignm length: | 483 |
Alignm identity: | 356 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 78, 83 |
Conread position: | 36-530 |
Cow position: | chr16:406971-406497 (view UCSC Genome Browser custom track) |
Alignm length: | 500 |
Alignm identity: | 376 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 25, 20 |
Conread position: | 36-530 |
Cow position: | chr16:1567390-1566912 (view UCSC Genome Browser custom track) |
Alignm length: | 499 |
Alignm identity: | 383 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 78, 83 |
Conread position: | 36-530 |
Cow position: | chr16:2410904-2410425 (view UCSC Genome Browser custom track) |
Alignm length: | 500 |
Alignm identity: | 388 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 78, 83 |
Conread position: | 36-530 |
Cow position: | chr16:2483077-2482596 (view UCSC Genome Browser custom track) |
Alignm length: | 502 |
Alignm identity: | 378 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 78, 83 |
Conread position: | 36-530 |
Cow position: | chr16:4478920-4478427 (view UCSC Genome Browser custom track) |
Alignm length: | 502 |
Alignm identity: | 360 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 78, 43 |
Conread position: | 36-530 |
Cow position: | chr16:7676392-7675915 (view UCSC Genome Browser custom track) |
Alignm length: | 500 |
Alignm identity: | 369 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 78, 83 |
Conread position: | 36-530 |
Cow position: | chr16:15185134-15185617 (view UCSC Genome Browser custom track) |
Alignm length: | 502 |
Alignm identity: | 385 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 78, 83 |
Conread position: | 36-530 |
Cow position: | chr16:21185677-21186158 (view UCSC Genome Browser custom track) |
Alignm length: | 499 |
Alignm identity: | 360 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 290, 66 |
Conread position: | 36-530 |
Cow position: | chr16:23252372-23251894 (view UCSC Genome Browser custom track) |
Alignm length: | 498 |
Alignm identity: | 382 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 77, 83 |
Conread position: | 36-530 |
Cow position: | chr16:23535827-23535347 (view UCSC Genome Browser custom track) |
Alignm length: | 501 |
Alignm identity: | 378 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 78, 26 |
Conread position: | 36-530 |
Cow position: | chr16:25441689-25442170 (view UCSC Genome Browser custom track) |
Alignm length: | 503 |
Alignm identity: | 389 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 78, 83 |
Conread position: | 36-530 |
Cow position: | chr16:26663812-26664295 (view UCSC Genome Browser custom track) |
Alignm length: | 502 |
Alignm identity: | 382 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 78, 98 |
Conread position: | 36-530 |
Cow position: | chr16:40296114-40295630 (view UCSC Genome Browser custom track) |
Alignm length: | 504 |
Alignm identity: | 383 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 78, 83 |
Conread position: | 36-530 |
Cow position: | chr16:43897213-43896731 (view UCSC Genome Browser custom track) |
Alignm length: | 502 |
Alignm identity: | 381 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 78, 83 |
Conread position: | 36-532 |
Cow position: | chr16:28170309-28169807 (view UCSC Genome Browser custom track) |
Alignm length: | 512 |
Alignm identity: | 354 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 196, 234 |
Conread position: | 36-534 |
Cow position: | chr16:8816042-8815557 (view UCSC Genome Browser custom track) |
Alignm length: | 506 |
Alignm identity: | 394 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 78, 12 |
Conread position: | 36-534 |
Cow position: | chr16:29047085-29047569 (view UCSC Genome Browser custom track) |
Alignm length: | 506 |
Alignm identity: | 367 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 78, 83 |
Conread position: | 37-530 |
Cow position: | chr16:15493566-15494047 (view UCSC Genome Browser custom track) |
Alignm length: | 500 |
Alignm identity: | 376 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 77, 82 |
Conread position: | 37-534 |
Cow position: | chr16:15476905-15477390 (view UCSC Genome Browser custom track) |
Alignm length: | 506 |
Alignm identity: | 387 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 77, 39 |
Conread position: | 40-315 |
Cow position: | chr16:20201983-20202256 (view UCSC Genome Browser custom track) |
Alignm length: | 277 |
Alignm identity: | 204 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 259, 44 |
Conread position: | 40-354 |
Cow position: | chr16:12537858-12537546 (view UCSC Genome Browser custom track) |
Alignm length: | 320 |
Alignm identity: | 251 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 74, 79 |
Conread position: | 43-313 |
Cow position: | chr16:11283379-11283648 (view UCSC Genome Browser custom track) |
Alignm length: | 272 |
Alignm identity: | 202 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 194, 221 |
Conread position: | 43-342 |
Cow position: | chr16:5661913-5662213 (view UCSC Genome Browser custom track) |
Alignm length: | 305 |
Alignm identity: | 229 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 273, 133 |
Conread position: | 48-530 |
Cow position: | chr16:5484805-5485274 (view UCSC Genome Browser custom track) |
Alignm length: | 488 |
Alignm identity: | 369 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 66, 71 |
Conread position: | 49-354 |
Cow position: | chr16:25342044-25342350 (view UCSC Genome Browser custom track) |
Alignm length: | 311 |
Alignm identity: | 248 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 65, 70 |
Conread position: | 59-530 |
Cow position: | chr16:1860307-1860754 (view UCSC Genome Browser custom track) |
Alignm length: | 476 |
Alignm identity: | 355 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 260, 201 |
Conread position: | 62-208 |
Cow position: | chr16:32795-32939 (view UCSC Genome Browser custom track) |
Alignm length: | 147 |
Alignm identity: | 113 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 70, 0 |
Conread position: | 121-534 |
Cow position: | chr16:337314-337713 (view UCSC Genome Browser custom track) |
Alignm length: | 418 |
Alignm identity: | 298 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 197, 147 |
Conread position: | 136-534 |
Cow position: | chr16:26978300-26978675 (view UCSC Genome Browser custom track) |
Alignm length: | 403 |
Alignm identity: | 289 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 189, 124 |
Conread position: | 143-530 |
Cow position: | chr16:26105892-26105517 (view UCSC Genome Browser custom track) |
Alignm length: | 393 |
Alignm identity: | 295 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 166, 25 |
Conread position: | 165-530 |
Cow position: | chr16:15567445-15567799 (view UCSC Genome Browser custom track) |
Alignm length: | 371 |
Alignm identity: | 281 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 144, 104 |
Conread position: | 215-533 |
Cow position: | chr16:49234390-49234086 (view UCSC Genome Browser custom track) |
Alignm length: | 321 |
Alignm identity: | 245 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 103, 54 |
Conread position: | 274-534 |
Cow position: | chr16:16897758-16898004 (view UCSC Genome Browser custom track) |
Alignm length: | 264 |
Alignm identity: | 187 |
Alignm E-value: | 7e-29 |
Alignm gaps (pig, cow): | 65, 28 |
Conread position: | 375-531 |
Cow position: | chr16:23808724-23808872 (view UCSC Genome Browser custom track) |
Alignm length: | 157 |
Alignm identity: | 118 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 26, 0 |
Show alignments to all cow chromosomes.