Cow genome map
| Conread name: | Liv1-LVRM10162A01 |
| Conread position: | 6-532 |
| Cow position: | chr20:18314575-18314056 (view UCSC Genome Browser custom track) |
| Alignm length: | 540 |
| Alignm identity: | 410 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 79 |
| Conread position: | 27-534 |
| Cow position: | chr20:13679245-13678754 (view UCSC Genome Browser custom track) |
| Alignm length: | 516 |
| Alignm identity: | 366 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 279, 11 |
| Conread position: | 31-325 |
| Cow position: | chr20:19884290-19884572 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 197 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 184, 13 |
| Conread position: | 31-354 |
| Cow position: | chr20:24616065-24615740 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 278, 6 |
| Conread position: | 33-205 |
| Cow position: | chr20:16178931-16178768 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 130 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 33-429 |
| Cow position: | chr20:13433792-13433401 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 285, 36 |
| Conread position: | 33-534 |
| Cow position: | chr20:14870144-14869665 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 369 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 418, 96 |
| Conread position: | 34-228 |
| Cow position: | chr20:7113383-7113193 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 154 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 80, 45 |
| Conread position: | 34-327 |
| Cow position: | chr20:37442491-37442215 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 34-429 |
| Cow position: | chr20:22207926-22208313 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 129 |
| Conread position: | 34-454 |
| Cow position: | chr20:7083602-7083200 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 284 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 282, 79 |
| Conread position: | 34-467 |
| Cow position: | chr20:10101896-10101474 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 283, 28 |
| Conread position: | 34-530 |
| Cow position: | chr20:25850023-25849533 (view UCSC Genome Browser custom track) |
| Alignm length: | 512 |
| Alignm identity: | 376 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 85 |
| Conread position: | 34-534 |
| Cow position: | chr20:8216321-8216805 (view UCSC Genome Browser custom track) |
| Alignm length: | 505 |
| Alignm identity: | 380 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 274, 57 |
| Conread position: | 34-534 |
| Cow position: | chr20:37581016-37581506 (view UCSC Genome Browser custom track) |
| Alignm length: | 514 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 111, 91 |
| Conread position: | 35-530 |
| Cow position: | chr20:23468857-23468374 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 377 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 84 |
| Conread position: | 36-218 |
| Cow position: | chr20:30685125-30685307 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 36-279 |
| Cow position: | chr20:21915126-21915366 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 193 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 83 |
| Conread position: | 36-355 |
| Cow position: | chr20:16105733-16105412 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 271, 227 |
| Conread position: | 36-355 |
| Cow position: | chr20:38351480-38351800 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 283, 227 |
| Conread position: | 36-365 |
| Cow position: | chr20:17661269-17660942 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 100 |
| Conread position: | 36-504 |
| Cow position: | chr20:15097069-15096627 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 69 |
| Conread position: | 36-515 |
| Cow position: | chr20:12437900-12437440 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 373 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 83 |
| Conread position: | 36-528 |
| Cow position: | chr20:21394734-21395206 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 366 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 79 |
| Conread position: | 36-529 |
| Cow position: | chr20:15292809-15293277 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 367 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 83 |
| Conread position: | 36-529 |
| Cow position: | chr20:28161626-28162103 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 377 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 83 |
| Conread position: | 36-530 |
| Cow position: | chr20:8974012-8973531 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 201, 228 |
| Conread position: | 36-530 |
| Cow position: | chr20:12569329-12569810 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 384 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 26 |
| Conread position: | 36-530 |
| Cow position: | chr20:19438722-19439203 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 364 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 283, 227 |
| Conread position: | 36-530 |
| Cow position: | chr20:23799690-23800172 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 378 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 83 |
| Conread position: | 36-530 |
| Cow position: | chr20:27870010-27870492 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 373 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 83 |
| Conread position: | 36-530 |
| Cow position: | chr20:35125302-35125781 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 381 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 83 |
| Conread position: | 36-531 |
| Cow position: | chr20:5535741-5536226 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 378 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 83 |
| Conread position: | 36-532 |
| Cow position: | chr20:823566-824063 (view UCSC Genome Browser custom track) |
| Alignm length: | 504 |
| Alignm identity: | 360 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 25 |
| Conread position: | 36-532 |
| Cow position: | chr20:13763714-13764190 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 378 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 83 |
| Conread position: | 36-533 |
| Cow position: | chr20:29949310-29949808 (view UCSC Genome Browser custom track) |
| Alignm length: | 506 |
| Alignm identity: | 380 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 83 |
| Conread position: | 38-535 |
| Cow position: | chr20:19355572-19356060 (view UCSC Genome Browser custom track) |
| Alignm length: | 505 |
| Alignm identity: | 361 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 229 |
| Conread position: | 39-315 |
| Cow position: | chr20:872152-871891 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 40-532 |
| Cow position: | chr20:28564779-28564293 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 361 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 78 |
| Conread position: | 43-532 |
| Cow position: | chr20:10854544-10854048 (view UCSC Genome Browser custom track) |
| Alignm length: | 511 |
| Alignm identity: | 357 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 158, 86 |
| Conread position: | 43-532 |
| Cow position: | chr20:15066298-15066759 (view UCSC Genome Browser custom track) |
| Alignm length: | 494 |
| Alignm identity: | 358 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 264, 68 |
| Conread position: | 231-532 |
| Cow position: | chr20:9343971-9344259 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 230 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 76, 25 |
| Conread position: | 266-530 |
| Cow position: | chr20:27338243-27338487 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 197 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 47, 92 |
Show alignments to all cow chromosomes.