Cow genome map
| Conread name: | Liv1-LVRM10162A01 |
| Conread position: | 4-532 |
| Cow position: | chr22:8737609-8737110 (view UCSC Genome Browser custom track) |
| Alignm length: | 532 |
| Alignm identity: | 369 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 49 |
| Conread position: | 4-534 |
| Cow position: | chr22:37133378-37133888 (view UCSC Genome Browser custom track) |
| Alignm length: | 532 |
| Alignm identity: | 398 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 456, 25 |
| Conread position: | 6-290 |
| Cow position: | chr22:35671648-35671354 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 265 |
| Conread position: | 7-534 |
| Cow position: | chr22:45930385-45930903 (view UCSC Genome Browser custom track) |
| Alignm length: | 543 |
| Alignm identity: | 360 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 81 |
| Conread position: | 31-546 |
| Cow position: | chr22:11032496-11032995 (view UCSC Genome Browser custom track) |
| Alignm length: | 522 |
| Alignm identity: | 405 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 279, 6 |
| Conread position: | 33-250 |
| Cow position: | chr22:5312127-5312336 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 155 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 136, 60 |
| Conread position: | 33-327 |
| Cow position: | chr22:19586145-19585856 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 211 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 280, 96 |
| Conread position: | 33-353 |
| Cow position: | chr22:36590544-36590216 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 225 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 105, 231 |
| Conread position: | 33-534 |
| Cow position: | chr22:6502393-6501903 (view UCSC Genome Browser custom track) |
| Alignm length: | 511 |
| Alignm identity: | 385 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 238, 82 |
| Conread position: | 34-339 |
| Cow position: | chr22:14630165-14630470 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 273, 229 |
| Conread position: | 34-354 |
| Cow position: | chr22:37072338-37072014 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 181, 173 |
| Conread position: | 34-458 |
| Cow position: | chr22:44350915-44350505 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 273, 58 |
| Conread position: | 34-527 |
| Cow position: | chr22:522647-522168 (view UCSC Genome Browser custom track) |
| Alignm length: | 498 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 100 |
| Conread position: | 34-529 |
| Cow position: | chr22:36184504-36184989 (view UCSC Genome Browser custom track) |
| Alignm length: | 498 |
| Alignm identity: | 367 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 180, 226 |
| Conread position: | 34-530 |
| Cow position: | chr22:11804310-11803823 (view UCSC Genome Browser custom track) |
| Alignm length: | 504 |
| Alignm identity: | 370 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 135, 231 |
| Conread position: | 34-531 |
| Cow position: | chr22:2395248-2394757 (view UCSC Genome Browser custom track) |
| Alignm length: | 504 |
| Alignm identity: | 324 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 95, 100 |
| Conread position: | 34-533 |
| Cow position: | chr22:1322963-1323440 (view UCSC Genome Browser custom track) |
| Alignm length: | 505 |
| Alignm identity: | 368 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 285, 49 |
| Conread position: | 34-534 |
| Cow position: | chr22:12730935-12730453 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 386 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 293, 28 |
| Conread position: | 35-258 |
| Cow position: | chr22:44518588-44518369 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 173 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 87, 61 |
| Conread position: | 35-445 |
| Cow position: | chr22:44457802-44458201 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 84 |
| Conread position: | 36-188 |
| Cow position: | chr22:36129663-36129815 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 78, 82 |
| Conread position: | 36-262 |
| Cow position: | chr22:27284775-27285001 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 172 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 36-352 |
| Cow position: | chr22:36551490-36551184 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 221 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 174, 41 |
| Conread position: | 36-354 |
| Cow position: | chr22:31314095-31314413 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 98 |
| Conread position: | 36-411 |
| Cow position: | chr22:24950846-24951221 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 24 |
| Conread position: | 36-490 |
| Cow position: | chr22:37292921-37292474 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 357 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 231 |
| Conread position: | 36-529 |
| Cow position: | chr22:3802937-3803412 (view UCSC Genome Browser custom track) |
| Alignm length: | 497 |
| Alignm identity: | 370 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 179, 171 |
| Conread position: | 36-530 |
| Cow position: | chr22:326420-325959 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 198, 49 |
| Conread position: | 36-530 |
| Cow position: | chr22:537849-538334 (view UCSC Genome Browser custom track) |
| Alignm length: | 495 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 234, 0 |
| Conread position: | 36-530 |
| Cow position: | chr22:559953-559477 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 367 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 62 |
| Conread position: | 36-530 |
| Cow position: | chr22:694370-694852 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 357 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 201, 115 |
| Conread position: | 36-530 |
| Cow position: | chr22:1520271-1519789 (view UCSC Genome Browser custom track) |
| Alignm length: | 505 |
| Alignm identity: | 383 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 20 |
| Conread position: | 36-530 |
| Cow position: | chr22:3277610-3277129 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 357 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 283, 85 |
| Conread position: | 36-530 |
| Cow position: | chr22:6021411-6021895 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 361 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 273, 227 |
| Conread position: | 36-530 |
| Cow position: | chr22:10909088-10908608 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 360 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 280, 227 |
| Conread position: | 36-530 |
| Cow position: | chr22:18028030-18028516 (view UCSC Genome Browser custom track) |
| Alignm length: | 498 |
| Alignm identity: | 356 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 283, 227 |
| Conread position: | 36-530 |
| Cow position: | chr22:18815631-18815135 (view UCSC Genome Browser custom track) |
| Alignm length: | 504 |
| Alignm identity: | 369 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 35 |
| Conread position: | 36-530 |
| Cow position: | chr22:19142941-19142462 (view UCSC Genome Browser custom track) |
| Alignm length: | 497 |
| Alignm identity: | 368 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 84 |
| Conread position: | 36-530 |
| Cow position: | chr22:20240094-20239611 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 362 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 133, 228 |
| Conread position: | 36-530 |
| Cow position: | chr22:21590086-21590565 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 378 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 84 |
| Conread position: | 36-530 |
| Cow position: | chr22:31334286-31333817 (view UCSC Genome Browser custom track) |
| Alignm length: | 498 |
| Alignm identity: | 376 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 83 |
| Conread position: | 36-530 |
| Cow position: | chr22:34169087-34169569 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 389 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 83 |
| Conread position: | 36-530 |
| Cow position: | chr22:36860781-36860309 (view UCSC Genome Browser custom track) |
| Alignm length: | 497 |
| Alignm identity: | 376 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 291, 78 |
| Conread position: | 36-530 |
| Cow position: | chr22:39468772-39468290 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 385 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 83 |
| Conread position: | 36-530 |
| Cow position: | chr22:42991928-42992405 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 378 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 83 |
| Conread position: | 36-530 |
| Cow position: | chr22:44397196-44397663 (view UCSC Genome Browser custom track) |
| Alignm length: | 497 |
| Alignm identity: | 365 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 26 |
| Conread position: | 36-530 |
| Cow position: | chr22:46580988-46580489 (view UCSC Genome Browser custom track) |
| Alignm length: | 515 |
| Alignm identity: | 356 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 224, 64 |
| Conread position: | 36-531 |
| Cow position: | chr22:17327706-17327225 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 380 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 31 |
| Conread position: | 36-532 |
| Cow position: | chr22:1879542-1880036 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 307, 227 |
| Conread position: | 36-532 |
| Cow position: | chr22:27309027-27308542 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 357 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 283, 227 |
| Conread position: | 37-504 |
| Cow position: | chr22:15313202-15312746 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 82 |
| Conread position: | 38-300 |
| Cow position: | chr22:6142632-6142377 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 212 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 162, 0 |
| Conread position: | 39-407 |
| Cow position: | chr22:41240125-41240490 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 252 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 86, 225 |
| Conread position: | 40-530 |
| Cow position: | chr22:6332472-6332940 (view UCSC Genome Browser custom track) |
| Alignm length: | 497 |
| Alignm identity: | 374 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 50 |
| Conread position: | 43-458 |
| Cow position: | chr22:44368871-44368458 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 229 |
| Conread position: | 44-532 |
| Cow position: | chr22:44491790-44492287 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 305, 196 |
| Conread position: | 45-235 |
| Cow position: | chr22:30677749-30677939 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 48-212 |
| Cow position: | chr22:34600148-34600306 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 128, 0 |
| Conread position: | 48-526 |
| Cow position: | chr22:37267921-37268392 (view UCSC Genome Browser custom track) |
| Alignm length: | 487 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 192, 176 |
| Conread position: | 56-534 |
| Cow position: | chr22:1281963-1281485 (view UCSC Genome Browser custom track) |
| Alignm length: | 498 |
| Alignm identity: | 379 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 174 |
| Conread position: | 58-534 |
| Cow position: | chr22:37140672-37141134 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 360 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 402, 35 |
| Conread position: | 75-483 |
| Cow position: | chr22:16201714-16202112 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 163, 189 |
| Conread position: | 122-510 |
| Cow position: | chr22:41418480-41418113 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 337, 139 |
| Conread position: | 130-530 |
| Cow position: | chr22:5937311-5936921 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 169, 22 |
| Conread position: | 263-534 |
| Cow position: | chr22:8121110-8120846 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 213 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 99 |
| Conread position: | 387-533 |
| Cow position: | chr22:23801111-23800971 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 112 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 73, 20 |
Show alignments to all cow chromosomes.