Cow genome map
| Conread name: | Liv1-LVRM10162A01 |
| Conread position: | 6-532 |
| Cow position: | chr23:19949890-19949358 (view UCSC Genome Browser custom track) |
| Alignm length: | 539 |
| Alignm identity: | 374 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 266 |
| Conread position: | 7-456 |
| Cow position: | chr23:1401799-1401384 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 22 |
| Conread position: | 32-527 |
| Cow position: | chr23:2576170-2576639 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 359 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 276, 130 |
| Conread position: | 33-308 |
| Cow position: | chr23:14778416-14778149 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 198 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 107, 0 |
| Conread position: | 33-521 |
| Cow position: | chr23:20155473-20154993 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 86 |
| Conread position: | 33-530 |
| Cow position: | chr23:15177819-15178302 (view UCSC Genome Browser custom track) |
| Alignm length: | 506 |
| Alignm identity: | 378 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 86 |
| Conread position: | 33-530 |
| Cow position: | chr23:16498483-16498011 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 382 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 101 |
| Conread position: | 34-292 |
| Cow position: | chr23:7336867-7337124 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 213 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 33 |
| Conread position: | 34-348 |
| Cow position: | chr23:1013041-1012730 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 221 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 85, 67 |
| Conread position: | 34-354 |
| Cow position: | chr23:19450860-19451177 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 293, 109 |
| Conread position: | 34-412 |
| Cow position: | chr23:4510814-4511178 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 278, 94 |
| Conread position: | 34-458 |
| Cow position: | chr23:16614689-16614281 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 34-534 |
| Cow position: | chr23:618712-618239 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 294, 9 |
| Conread position: | 34-534 |
| Cow position: | chr23:29451594-29451119 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 373 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 426, 194 |
| Conread position: | 35-523 |
| Cow position: | chr23:27971288-27971753 (view UCSC Genome Browser custom track) |
| Alignm length: | 496 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 21 |
| Conread position: | 35-528 |
| Cow position: | chr23:28367774-28367299 (view UCSC Genome Browser custom track) |
| Alignm length: | 498 |
| Alignm identity: | 357 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 301, 98 |
| Conread position: | 36-267 |
| Cow position: | chr23:4360557-4360787 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 163 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 126, 0 |
| Conread position: | 36-291 |
| Cow position: | chr23:14973815-14973563 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 111, 26 |
| Conread position: | 36-312 |
| Cow position: | chr23:28218040-28218307 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 193 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 36-354 |
| Cow position: | chr23:2717142-2717456 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 83 |
| Conread position: | 36-458 |
| Cow position: | chr23:2312493-2312084 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 290, 227 |
| Conread position: | 36-481 |
| Cow position: | chr23:28914144-28914586 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 20 |
| Conread position: | 36-505 |
| Cow position: | chr23:4639873-4639423 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 354 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 98 |
| Conread position: | 36-524 |
| Cow position: | chr23:36030624-36030155 (view UCSC Genome Browser custom track) |
| Alignm length: | 495 |
| Alignm identity: | 372 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 47 |
| Conread position: | 36-530 |
| Cow position: | chr23:2758636-2759119 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 369 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 83 |
| Conread position: | 36-530 |
| Cow position: | chr23:3706869-3707354 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 355 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 206, 228 |
| Conread position: | 36-530 |
| Cow position: | chr23:3880333-3879856 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 368 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 82 |
| Conread position: | 36-530 |
| Cow position: | chr23:4817770-4818251 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 368 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 82 |
| Conread position: | 36-530 |
| Cow position: | chr23:4889434-4889915 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 373 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 43 |
| Conread position: | 36-530 |
| Cow position: | chr23:11779536-11780009 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 372 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 20 |
| Conread position: | 36-530 |
| Cow position: | chr23:15526317-15526794 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 375 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 95 |
| Conread position: | 36-530 |
| Cow position: | chr23:19490289-19490772 (view UCSC Genome Browser custom track) |
| Alignm length: | 498 |
| Alignm identity: | 361 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 48 |
| Conread position: | 36-530 |
| Cow position: | chr23:23171249-23171730 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 364 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 290, 23 |
| Conread position: | 36-530 |
| Cow position: | chr23:27400256-27400751 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 365 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 98 |
| Conread position: | 36-534 |
| Cow position: | chr23:6220001-6220487 (view UCSC Genome Browser custom track) |
| Alignm length: | 504 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 271, 112 |
| Conread position: | 37-529 |
| Cow position: | chr23:22146548-22146083 (view UCSC Genome Browser custom track) |
| Alignm length: | 494 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 423, 114 |
| Conread position: | 38-355 |
| Cow position: | chr23:15041993-15041686 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 178, 75 |
| Conread position: | 40-354 |
| Cow position: | chr23:15219151-15218834 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 92 |
| Conread position: | 40-530 |
| Cow position: | chr23:965744-965269 (view UCSC Genome Browser custom track) |
| Alignm length: | 498 |
| Alignm identity: | 368 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 80 |
| Conread position: | 40-530 |
| Cow position: | chr23:2026326-2025854 (view UCSC Genome Browser custom track) |
| Alignm length: | 497 |
| Alignm identity: | 386 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 79 |
| Conread position: | 43-527 |
| Cow position: | chr23:2341832-2342320 (view UCSC Genome Browser custom track) |
| Alignm length: | 496 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 275, 220 |
| Conread position: | 46-346 |
| Cow position: | chr23:25683177-25682882 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 271, 168 |
| Conread position: | 47-530 |
| Cow position: | chr23:2781209-2780738 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 358 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 214 |
| Conread position: | 73-530 |
| Cow position: | chr23:14964258-14963825 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 58 |
| Conread position: | 75-534 |
| Cow position: | chr23:5873791-5873344 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 241, 171 |
| Conread position: | 100-530 |
| Cow position: | chr23:1956715-1957114 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 19 |
| Conread position: | 133-534 |
| Cow position: | chr23:5739510-5739124 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 185, 110 |
| Conread position: | 216-534 |
| Cow position: | chr23:31649112-31648789 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 228 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 99, 14 |
| Conread position: | 283-534 |
| Cow position: | chr23:30237260-30237501 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 177, 60 |
| Conread position: | 386-530 |
| Cow position: | chr23:17879033-17878889 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 111 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 74, 22 |
Show alignments to all cow chromosomes.