Cow genome map
| Conread name: | Liv1-LVRM10162A01 |
| Conread position: | 1-534 |
| Cow position: | chr24:14389747-14389215 (view UCSC Genome Browser custom track) |
| Alignm length: | 548 |
| Alignm identity: | 387 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 109 |
| Conread position: | 7-530 |
| Cow position: | chr24:17696178-17695665 (view UCSC Genome Browser custom track) |
| Alignm length: | 530 |
| Alignm identity: | 403 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 128 |
| Conread position: | 31-303 |
| Cow position: | chr24:29182981-29183250 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 6, 0 |
| Conread position: | 31-327 |
| Cow position: | chr24:11866418-11866123 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 282, 6 |
| Conread position: | 31-529 |
| Cow position: | chr24:7090140-7089654 (view UCSC Genome Browser custom track) |
| Alignm length: | 504 |
| Alignm identity: | 369 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 6 |
| Conread position: | 31-529 |
| Cow position: | chr24:33934205-33934702 (view UCSC Genome Browser custom track) |
| Alignm length: | 507 |
| Alignm identity: | 370 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 6 |
| Conread position: | 31-534 |
| Cow position: | chr24:36558944-36558447 (view UCSC Genome Browser custom track) |
| Alignm length: | 514 |
| Alignm identity: | 390 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 8 |
| Conread position: | 33-253 |
| Cow position: | chr24:40193347-40193564 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 179 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 33-530 |
| Cow position: | chr24:9544896-9545369 (view UCSC Genome Browser custom track) |
| Alignm length: | 504 |
| Alignm identity: | 373 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 25 |
| Conread position: | 34-255 |
| Cow position: | chr24:14383760-14383541 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 178 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 85 |
| Conread position: | 34-330 |
| Cow position: | chr24:12162744-12163037 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 34-464 |
| Cow position: | chr24:12205483-12205056 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 122 |
| Conread position: | 34-486 |
| Cow position: | chr24:6059733-6060169 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 179, 49 |
| Conread position: | 34-524 |
| Cow position: | chr24:40655883-40656353 (view UCSC Genome Browser custom track) |
| Alignm length: | 498 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 195, 233 |
| Conread position: | 34-525 |
| Cow position: | chr24:12129235-12128753 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 365 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 85 |
| Conread position: | 34-530 |
| Cow position: | chr24:19702318-19702812 (view UCSC Genome Browser custom track) |
| Alignm length: | 504 |
| Alignm identity: | 358 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 273, 25 |
| Conread position: | 34-530 |
| Cow position: | chr24:29305488-29304999 (view UCSC Genome Browser custom track) |
| Alignm length: | 506 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 203, 233 |
| Conread position: | 34-531 |
| Cow position: | chr24:6332864-6332381 (view UCSC Genome Browser custom track) |
| Alignm length: | 507 |
| Alignm identity: | 367 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 231 |
| Conread position: | 34-534 |
| Cow position: | chr24:38638372-38638853 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 373 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 13 |
| Conread position: | 35-347 |
| Cow position: | chr24:12143503-12143192 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 172, 182 |
| Conread position: | 36-232 |
| Cow position: | chr24:8031125-8031321 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 36-310 |
| Cow position: | chr24:43814598-43814870 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 201 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 227, 0 |
| Conread position: | 36-346 |
| Cow position: | chr24:12484483-12484174 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 194 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 201, 228 |
| Conread position: | 36-355 |
| Cow position: | chr24:12699982-12699653 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 229, 0 |
| Conread position: | 36-355 |
| Cow position: | chr24:44018368-44018672 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 228 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 290, 160 |
| Conread position: | 36-525 |
| Cow position: | chr24:6328197-6327719 (view UCSC Genome Browser custom track) |
| Alignm length: | 496 |
| Alignm identity: | 355 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 290, 223 |
| Conread position: | 36-529 |
| Cow position: | chr24:12334924-12334443 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 374 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 83 |
| Conread position: | 36-530 |
| Cow position: | chr24:4414697-4414219 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 379 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 83 |
| Conread position: | 36-530 |
| Cow position: | chr24:6024269-6023791 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 360 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 133, 94 |
| Conread position: | 36-530 |
| Cow position: | chr24:6084903-6085377 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 132, 160 |
| Conread position: | 36-530 |
| Cow position: | chr24:6406864-6407349 (view UCSC Genome Browser custom track) |
| Alignm length: | 497 |
| Alignm identity: | 372 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 83 |
| Conread position: | 36-530 |
| Cow position: | chr24:9187899-9187428 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 133, 228 |
| Conread position: | 36-530 |
| Cow position: | chr24:12087041-12087523 (view UCSC Genome Browser custom track) |
| Alignm length: | 504 |
| Alignm identity: | 381 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 83 |
| Conread position: | 36-530 |
| Cow position: | chr24:12109873-12109389 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 358 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 120, 229 |
| Conread position: | 36-530 |
| Cow position: | chr24:13233086-13233572 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 357 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 269, 227 |
| Conread position: | 36-530 |
| Cow position: | chr24:19834226-19834711 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 380 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 83 |
| Conread position: | 36-530 |
| Cow position: | chr24:22971927-22972407 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 380 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 26 |
| Conread position: | 36-530 |
| Cow position: | chr24:29188125-29188607 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 389 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 83 |
| Conread position: | 36-532 |
| Cow position: | chr24:5992393-5991907 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 283, 227 |
| Conread position: | 36-532 |
| Cow position: | chr24:6435313-6435801 (view UCSC Genome Browser custom track) |
| Alignm length: | 508 |
| Alignm identity: | 361 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 113 |
| Conread position: | 36-534 |
| Cow position: | chr24:6659657-6659179 (view UCSC Genome Browser custom track) |
| Alignm length: | 504 |
| Alignm identity: | 366 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 271, 123 |
| Conread position: | 36-534 |
| Cow position: | chr24:14871479-14871005 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 297, 105 |
| Conread position: | 37-310 |
| Cow position: | chr24:40975866-40975597 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 37-534 |
| Cow position: | chr24:6337220-6337707 (view UCSC Genome Browser custom track) |
| Alignm length: | 514 |
| Alignm identity: | 370 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 240 |
| Conread position: | 40-329 |
| Cow position: | chr24:37200169-37199888 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 201 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 210, 42 |
| Conread position: | 40-498 |
| Cow position: | chr24:32846538-32846988 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 54 |
| Conread position: | 43-530 |
| Cow position: | chr24:13189013-13189501 (view UCSC Genome Browser custom track) |
| Alignm length: | 497 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 223, 302 |
| Conread position: | 43-530 |
| Cow position: | chr24:23505023-23504548 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 355 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 283, 220 |
| Conread position: | 44-530 |
| Cow position: | chr24:147767-147295 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 373 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 75 |
| Conread position: | 50-354 |
| Cow position: | chr24:34494308-34494006 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 211 |
| Alignm E-value: | 8.00141e-43 |
| Alignm gaps (pig, cow): | 289, 19 |
| Conread position: | 87-533 |
| Cow position: | chr24:12238181-12238608 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 166 |
| Conread position: | 118-530 |
| Cow position: | chr24:6129751-6130141 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 201, 47 |
| Conread position: | 135-529 |
| Cow position: | chr24:14754605-14755000 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 174, 134 |
| Conread position: | 138-532 |
| Cow position: | chr24:17321640-17322030 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 205, 131 |
Show alignments to all cow chromosomes.