Cow genome map
| Conread name: | Liv1-LVRM10162A01 |
| Conread position: | 7-530 |
| Cow position: | chr28:7741226-7741719 (view UCSC Genome Browser custom track) |
| Alignm length: | 529 |
| Alignm identity: | 386 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 107, 31 |
| Conread position: | 8-341 |
| Cow position: | chr28:5765509-5765853 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 119 |
| Conread position: | 31-534 |
| Cow position: | chr28:24668411-24668890 (view UCSC Genome Browser custom track) |
| Alignm length: | 507 |
| Alignm identity: | 379 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 179, 7 |
| Conread position: | 33-212 |
| Cow position: | chr28:7789154-7788979 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 33-529 |
| Cow position: | chr28:10646607-10646150 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 366 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 416, 129 |
| Conread position: | 34-291 |
| Cow position: | chr28:3019924-3019669 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 202 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 225, 0 |
| Conread position: | 34-330 |
| Cow position: | chr28:32329731-32329429 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 204 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 82, 120 |
| Conread position: | 34-530 |
| Cow position: | chr28:10072068-10072550 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 376 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 282, 235 |
| Conread position: | 34-533 |
| Cow position: | chr28:8720151-8719680 (view UCSC Genome Browser custom track) |
| Alignm length: | 504 |
| Alignm identity: | 373 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 278, 48 |
| Conread position: | 34-534 |
| Cow position: | chr28:1386598-1386120 (view UCSC Genome Browser custom track) |
| Alignm length: | 504 |
| Alignm identity: | 372 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 280, 81 |
| Conread position: | 34-534 |
| Cow position: | chr28:21360274-21360773 (view UCSC Genome Browser custom track) |
| Alignm length: | 511 |
| Alignm identity: | 379 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 113 |
| Conread position: | 35-505 |
| Cow position: | chr28:29761134-29760677 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 127, 71 |
| Conread position: | 36-227 |
| Cow position: | chr28:17389277-17389468 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 78, 83 |
| Conread position: | 36-266 |
| Cow position: | chr28:7823337-7823566 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 171 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 36-303 |
| Cow position: | chr28:22232626-22232360 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 203, 228 |
| Conread position: | 36-310 |
| Cow position: | chr28:6779543-6779272 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 198 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 227, 0 |
| Conread position: | 36-322 |
| Cow position: | chr28:2724128-2723845 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 212 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 25 |
| Conread position: | 36-327 |
| Cow position: | chr28:5566950-5567241 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 84 |
| Conread position: | 36-491 |
| Cow position: | chr28:10581292-10580850 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 83 |
| Conread position: | 36-505 |
| Cow position: | chr28:1814068-1813613 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 367 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 83 |
| Conread position: | 36-529 |
| Cow position: | chr28:12151101-12151583 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 384 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 19 |
| Conread position: | 36-530 |
| Cow position: | chr28:783472-783934 (view UCSC Genome Browser custom track) |
| Alignm length: | 498 |
| Alignm identity: | 365 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 33 |
| Conread position: | 36-530 |
| Cow position: | chr28:1167081-1166607 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 387 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 83 |
| Conread position: | 36-530 |
| Cow position: | chr28:1505665-1506144 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 383 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 83 |
| Conread position: | 36-530 |
| Cow position: | chr28:3191458-3190978 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 373 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 26 |
| Conread position: | 36-530 |
| Cow position: | chr28:5750902-5750430 (view UCSC Genome Browser custom track) |
| Alignm length: | 497 |
| Alignm identity: | 374 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 26 |
| Conread position: | 36-530 |
| Cow position: | chr28:6538468-6537987 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 363 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 281, 155 |
| Conread position: | 36-530 |
| Cow position: | chr28:8379852-8380341 (view UCSC Genome Browser custom track) |
| Alignm length: | 508 |
| Alignm identity: | 385 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 83 |
| Conread position: | 36-530 |
| Cow position: | chr28:12409430-12408960 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 369 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 83 |
| Conread position: | 36-530 |
| Cow position: | chr28:13460769-13461253 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 371 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 83 |
| Conread position: | 36-530 |
| Cow position: | chr28:14704592-14704110 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 374 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 83 |
| Conread position: | 36-530 |
| Cow position: | chr28:14751339-14751821 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 358 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 281, 227 |
| Conread position: | 36-530 |
| Cow position: | chr28:22260356-22259874 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 379 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 83 |
| Conread position: | 36-530 |
| Cow position: | chr28:24589647-24590134 (view UCSC Genome Browser custom track) |
| Alignm length: | 498 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 199, 229 |
| Conread position: | 36-530 |
| Cow position: | chr28:26425460-26424977 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 385 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 83 |
| Conread position: | 36-530 |
| Cow position: | chr28:29820801-29821273 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 367 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 45 |
| Conread position: | 36-530 |
| Cow position: | chr28:33253099-33253583 (view UCSC Genome Browser custom track) |
| Alignm length: | 504 |
| Alignm identity: | 364 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 83 |
| Conread position: | 36-531 |
| Cow position: | chr28:5938280-5938762 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 383 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 83 |
| Conread position: | 36-532 |
| Cow position: | chr28:24884182-24883704 (view UCSC Genome Browser custom track) |
| Alignm length: | 506 |
| Alignm identity: | 359 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 225 |
| Conread position: | 36-534 |
| Cow position: | chr28:5802828-5803321 (view UCSC Genome Browser custom track) |
| Alignm length: | 510 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 239 |
| Conread position: | 36-534 |
| Cow position: | chr28:15586883-15587369 (view UCSC Genome Browser custom track) |
| Alignm length: | 510 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 76 |
| Conread position: | 40-458 |
| Cow position: | chr28:5113497-5113093 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 73 |
| Conread position: | 40-530 |
| Cow position: | chr28:7002795-7003273 (view UCSC Genome Browser custom track) |
| Alignm length: | 497 |
| Alignm identity: | 382 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 79 |
| Conread position: | 40-530 |
| Cow position: | chr28:18519646-18519174 (view UCSC Genome Browser custom track) |
| Alignm length: | 497 |
| Alignm identity: | 368 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 35 |
| Conread position: | 40-530 |
| Cow position: | chr28:32791574-32791104 (view UCSC Genome Browser custom track) |
| Alignm length: | 495 |
| Alignm identity: | 373 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 22 |
| Conread position: | 43-355 |
| Cow position: | chr28:9179429-9179740 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 272, 197 |
| Conread position: | 45-530 |
| Cow position: | chr28:17666498-17666029 (view UCSC Genome Browser custom track) |
| Alignm length: | 491 |
| Alignm identity: | 373 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 66 |
| Conread position: | 46-259 |
| Cow position: | chr28:2085308-2085518 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 168 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 68, 73 |
| Conread position: | 63-443 |
| Cow position: | chr28:1217331-1216961 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 56 |
| Conread position: | 87-355 |
| Cow position: | chr28:2429128-2429388 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 62, 69 |
| Conread position: | 87-534 |
| Cow position: | chr28:10460757-10460327 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 15 |
| Conread position: | 113-534 |
| Cow position: | chr28:5799169-5799574 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 157 |
| Conread position: | 363-529 |
| Cow position: | chr28:25760613-25760779 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 125 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 67, 44 |
| Conread position: | 374-534 |
| Cow position: | chr28:21566582-21566740 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 120 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 86, 34 |
Show alignments to all cow chromosomes.