Cow genome map
| Conread name: | Liv1-LVRM10162A01 |
| Conread position: | 7-355 |
| Cow position: | chr4:33595985-33596338 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 249 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 31, 22 |
| Conread position: | 7-355 |
| Cow position: | chr4:39270945-39270600 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 242 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 201, 31 |
| Conread position: | 31-250 |
| Cow position: | chr4:61108211-61107993 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 155 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 27, 12 |
| Conread position: | 33-530 |
| Cow position: | chr4:603494-603976 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 205, 232 |
| Conread position: | 33-530 |
| Cow position: | chr4:4416550-4417021 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 27 |
| Conread position: | 33-530 |
| Cow position: | chr4:16360391-16360877 (view UCSC Genome Browser custom track) |
| Alignm length: | 505 |
| Alignm identity: | 394 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 22 |
| Conread position: | 33-530 |
| Cow position: | chr4:67681671-67682156 (view UCSC Genome Browser custom track) |
| Alignm length: | 504 |
| Alignm identity: | 377 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 86 |
| Conread position: | 33-534 |
| Cow position: | chr4:28832039-28832522 (view UCSC Genome Browser custom track) |
| Alignm length: | 508 |
| Alignm identity: | 368 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 251, 163 |
| Conread position: | 34-354 |
| Cow position: | chr4:47254446-47254132 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 131, 58 |
| Conread position: | 34-531 |
| Cow position: | chr4:46665002-46665489 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 367 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 344, 41 |
| Conread position: | 34-532 |
| Cow position: | chr4:60263682-60263196 (view UCSC Genome Browser custom track) |
| Alignm length: | 508 |
| Alignm identity: | 391 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 83 |
| Conread position: | 36-313 |
| Cow position: | chr4:18190877-18191152 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 227, 0 |
| Conread position: | 36-316 |
| Cow position: | chr4:29531397-29531123 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 212 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 82 |
| Conread position: | 36-325 |
| Cow position: | chr4:48026885-48027169 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 83 |
| Conread position: | 36-345 |
| Cow position: | chr4:18517381-18517691 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 83 |
| Conread position: | 36-346 |
| Cow position: | chr4:34184058-34183746 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 174, 145 |
| Conread position: | 36-349 |
| Cow position: | chr4:31669758-31670066 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 83 |
| Conread position: | 36-354 |
| Cow position: | chr4:1367683-1367360 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 229 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 116, 68 |
| Conread position: | 36-429 |
| Cow position: | chr4:41333195-41333572 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 41 |
| Conread position: | 36-526 |
| Cow position: | chr4:16057161-16057638 (view UCSC Genome Browser custom track) |
| Alignm length: | 496 |
| Alignm identity: | 366 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 280, 97 |
| Conread position: | 36-529 |
| Cow position: | chr4:12240727-12240257 (view UCSC Genome Browser custom track) |
| Alignm length: | 504 |
| Alignm identity: | 372 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 18 |
| Conread position: | 36-529 |
| Cow position: | chr4:17925478-17925005 (view UCSC Genome Browser custom track) |
| Alignm length: | 498 |
| Alignm identity: | 373 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 51 |
| Conread position: | 36-529 |
| Cow position: | chr4:25599013-25598540 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 369 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 83 |
| Conread position: | 36-530 |
| Cow position: | chr4:1049778-1049298 (view UCSC Genome Browser custom track) |
| Alignm length: | 498 |
| Alignm identity: | 370 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 33 |
| Conread position: | 36-530 |
| Cow position: | chr4:1930149-1929679 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 358 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 283, 175 |
| Conread position: | 36-530 |
| Cow position: | chr4:3126274-3126766 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 225, 188 |
| Conread position: | 36-530 |
| Cow position: | chr4:10882030-10882511 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 382 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 26 |
| Conread position: | 36-530 |
| Cow position: | chr4:12587817-12588293 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 366 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 26 |
| Conread position: | 36-530 |
| Cow position: | chr4:13493801-13494292 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 375 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 83 |
| Conread position: | 36-530 |
| Cow position: | chr4:16639093-16639574 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 392 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 83 |
| Conread position: | 36-530 |
| Cow position: | chr4:17093384-17092903 (view UCSC Genome Browser custom track) |
| Alignm length: | 498 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 273, 227 |
| Conread position: | 36-530 |
| Cow position: | chr4:31564821-31564342 (view UCSC Genome Browser custom track) |
| Alignm length: | 505 |
| Alignm identity: | 381 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 48 |
| Conread position: | 36-530 |
| Cow position: | chr4:32212651-32213126 (view UCSC Genome Browser custom track) |
| Alignm length: | 497 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 228 |
| Conread position: | 36-530 |
| Cow position: | chr4:33072338-33071864 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 377 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 98 |
| Conread position: | 36-530 |
| Cow position: | chr4:36896855-36897336 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 386 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 83 |
| Conread position: | 36-530 |
| Cow position: | chr4:43319160-43318678 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 386 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 83 |
| Conread position: | 36-530 |
| Cow position: | chr4:43881588-43882066 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 377 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 83 |
| Conread position: | 36-530 |
| Cow position: | chr4:44726079-44726549 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 369 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 83 |
| Conread position: | 36-532 |
| Cow position: | chr4:159640-160128 (view UCSC Genome Browser custom track) |
| Alignm length: | 505 |
| Alignm identity: | 363 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 273, 227 |
| Conread position: | 36-532 |
| Cow position: | chr4:5444354-5443866 (view UCSC Genome Browser custom track) |
| Alignm length: | 505 |
| Alignm identity: | 360 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 271, 227 |
| Conread position: | 36-532 |
| Cow position: | chr4:18424043-18423557 (view UCSC Genome Browser custom track) |
| Alignm length: | 504 |
| Alignm identity: | 359 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 200 |
| Conread position: | 36-533 |
| Cow position: | chr4:22473835-22474310 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 134, 26 |
| Conread position: | 36-534 |
| Cow position: | chr4:356392-356874 (view UCSC Genome Browser custom track) |
| Alignm length: | 504 |
| Alignm identity: | 375 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 83 |
| Conread position: | 36-534 |
| Cow position: | chr4:6489881-6489397 (view UCSC Genome Browser custom track) |
| Alignm length: | 505 |
| Alignm identity: | 384 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 83 |
| Conread position: | 37-327 |
| Cow position: | chr4:11110782-11110496 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 227 |
| Conread position: | 38-341 |
| Cow position: | chr4:3132115-3131815 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 252, 30 |
| Conread position: | 40-530 |
| Cow position: | chr4:57984468-57984948 (view UCSC Genome Browser custom track) |
| Alignm length: | 494 |
| Alignm identity: | 364 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 79 |
| Conread position: | 43-212 |
| Cow position: | chr4:6268173-6268008 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 124 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 43-355 |
| Cow position: | chr4:18337352-18337665 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 283, 220 |
| Conread position: | 43-530 |
| Cow position: | chr4:529888-530366 (view UCSC Genome Browser custom track) |
| Alignm length: | 495 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 263, 220 |
| Conread position: | 43-530 |
| Cow position: | chr4:27334202-27334672 (view UCSC Genome Browser custom track) |
| Alignm length: | 491 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 276, 220 |
| Conread position: | 43-530 |
| Cow position: | chr4:44780736-44780263 (view UCSC Genome Browser custom track) |
| Alignm length: | 491 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 264, 220 |
| Conread position: | 44-534 |
| Cow position: | chr4:6206086-6206571 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 263, 64 |
| Conread position: | 48-353 |
| Cow position: | chr4:19006062-19005752 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 261, 215 |
| Conread position: | 62-355 |
| Cow position: | chr4:45298577-45298281 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 254, 201 |
| Conread position: | 88-474 |
| Cow position: | chr4:33494125-33494495 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 46 |
| Conread position: | 97-311 |
| Cow position: | chr4:100261-100049 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 172, 0 |
| Conread position: | 97-534 |
| Cow position: | chr4:49716219-49716637 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 220, 155 |
| Conread position: | 123-536 |
| Cow position: | chr4:14820298-14819901 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 205, 10 |
| Conread position: | 157-534 |
| Cow position: | chr4:54969323-54969694 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 197, 57 |
| Conread position: | 187-534 |
| Cow position: | chr4:967447-967111 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 244 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 138, 82 |
| Conread position: | 374-530 |
| Cow position: | chr4:42405413-42405569 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 119 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 60, 7 |
| Conread position: | 377-534 |
| Cow position: | chr4:11110469-11110314 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 29, 67 |
| Conread position: | 379-533 |
| Cow position: | chr4:19005500-19005346 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 126 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 28, 130 |
Show alignments to all cow chromosomes.