Cow genome map


           Conread name:
           Liv1-LVRM10162A01
        

               Conread position:
               1-534
               

               Cow position:
               
               

               Alignm length:
               542
               

               Alignm identity:
               363
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 105
               

               Conread position:
               4-506
               

               Cow position:
               
               

               Alignm length:
               510
               

               Alignm identity:
               388
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 51
               

               Conread position:
               6-392
               

               Cow position:
               
               

               Alignm length:
               395
               

               Alignm identity:
               290
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 79
               

               Conread position:
               6-534
               

               Cow position:
               
               

               Alignm length:
               535
               

               Alignm identity:
               383
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 261
               

               Conread position:
               7-324
               

               Cow position:
               
               

               Alignm length:
               331
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 322
               

               Conread position:
               7-530
               

               Cow position:
               
               

               Alignm length:
               536
               

               Alignm identity:
               402
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 135
               

               Conread position:
               7-530
               

               Cow position:
               
               

               Alignm length:
               536
               

               Alignm identity:
               395
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 116
               

               Conread position:
               7-530
               

               Cow position:
               
               

               Alignm length:
               537
               

               Alignm identity:
               398
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 120
               

               Conread position:
               26-285
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               188
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               64, 150
               

               Conread position:
               30-266
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               161
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               33-231
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               116, 85
               

               Conread position:
               33-261
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               200, 150
               

               Conread position:
               33-529
               

               Cow position:
               
               

               Alignm length:
               505
               

               Alignm identity:
               377
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 86
               

               Conread position:
               33-530
               

               Cow position:
               
               

               Alignm length:
               502
               

               Alignm identity:
               360
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               293, 207
               

               Conread position:
               33-530
               

               Cow position:
               
               

               Alignm length:
               506
               

               Alignm identity:
               363
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 101
               

               Conread position:
               33-534
               

               Cow position:
               
               

               Alignm length:
               507
               

               Alignm identity:
               388
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 101
               

               Conread position:
               34-200
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               133
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               34-345
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 85
               

               Conread position:
               34-354
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 218
               

               Conread position:
               34-355
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               275, 229
               

               Conread position:
               34-458
               

               Cow position:
               
               

               Alignm length:
               431
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 56
               

               Conread position:
               34-519
               

               Cow position:
               
               

               Alignm length:
               492
               

               Alignm identity:
               360
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 85
               

               Conread position:
               34-528
               

               Cow position:
               
               

               Alignm length:
               497
               

               Alignm identity:
               349
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               135, 226
               

               Conread position:
               34-529
               

               Cow position:
               
               

               Alignm length:
               501
               

               Alignm identity:
               375
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 100
               

               Conread position:
               34-530
               

               Cow position:
               
               

               Alignm length:
               501
               

               Alignm identity:
               355
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 109
               

               Conread position:
               34-530
               

               Cow position:
               
               

               Alignm length:
               498
               

               Alignm identity:
               371
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 85
               

               Conread position:
               34-532
               

               Cow position:
               
               

               Alignm length:
               507
               

               Alignm identity:
               358
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               107, 118
               

               Conread position:
               34-534
               

               Cow position:
               
               

               Alignm length:
               507
               

               Alignm identity:
               383
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               275, 81
               

               Conread position:
               34-534
               

               Cow position:
               
               

               Alignm length:
               504
               

               Alignm identity:
               372
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               181, 48
               

               Conread position:
               34-534
               

               Cow position:
               
               

               Alignm length:
               506
               

               Alignm identity:
               381
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 100
               

               Conread position:
               35-354
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               235, 270
               

               Conread position:
               35-534
               

               Cow position:
               
               

               Alignm length:
               512
               

               Alignm identity:
               384
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               129, 61
               

               Conread position:
               36-188
               

               Cow position:
               
               

               Alignm length:
               155
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               78, 83
               

               Conread position:
               36-205
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               36-206
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               90, 26
               

               Conread position:
               36-259
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               177
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               78, 51
               

               Conread position:
               36-283
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               197
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 26
               

               Conread position:
               36-304
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               200
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               36-306
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               202
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               227, 0
               

               Conread position:
               36-310
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               206
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               201, 228
               

               Conread position:
               36-316
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               207
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               210, 0
               

               Conread position:
               36-354
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               242
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               78, 10
               

               Conread position:
               36-355
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               283, 204
               

               Conread position:
               36-483
               

               Cow position:
               
               

               Alignm length:
               451
               

               Alignm identity:
               313
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               271, 49
               

               Conread position:
               36-527
               

               Cow position:
               
               

               Alignm length:
               496
               

               Alignm identity:
               343
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               283, 233
               

               Conread position:
               36-529
               

               Cow position:
               
               

               Alignm length:
               502
               

               Alignm identity:
               375
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 83
               

               Conread position:
               36-529
               

               Cow position:
               
               

               Alignm length:
               498
               

               Alignm identity:
               359
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               271, 227
               

               Conread position:
               36-530
               

               Cow position:
               
               

               Alignm length:
               504
               

               Alignm identity:
               377
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 20
               

               Conread position:
               36-530
               

               Cow position:
               
               

               Alignm length:
               503
               

               Alignm identity:
               381
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 83
               

               Conread position:
               36-530
               

               Cow position:
               
               

               Alignm length:
               501
               

               Alignm identity:
               364
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               273, 78
               

               Conread position:
               36-530
               

               Cow position:
               
               

               Alignm length:
               498
               

               Alignm identity:
               384
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 83
               

               Conread position:
               36-530
               

               Cow position:
               
               

               Alignm length:
               507
               

               Alignm identity:
               380
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 83
               

               Conread position:
               36-530
               

               Cow position:
               
               

               Alignm length:
               503
               

               Alignm identity:
               373
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               299, 115
               

               Conread position:
               36-530
               

               Cow position:
               
               

               Alignm length:
               500
               

               Alignm identity:
               376
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 49
               

               Conread position:
               36-530
               

               Cow position:
               
               

               Alignm length:
               502
               

               Alignm identity:
               353
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               225, 199
               

               Conread position:
               36-530
               

               Cow position:
               
               

               Alignm length:
               500
               

               Alignm identity:
               362
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               201, 228
               

               Conread position:
               36-530
               

               Cow position:
               
               

               Alignm length:
               502
               

               Alignm identity:
               379
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 82
               

               Conread position:
               36-530
               

               Cow position:
               
               

               Alignm length:
               501
               

               Alignm identity:
               385
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 83
               

               Conread position:
               36-530
               

               Cow position:
               
               

               Alignm length:
               501
               

               Alignm identity:
               381
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 83
               

               Conread position:
               36-530
               

               Cow position:
               
               

               Alignm length:
               495
               

               Alignm identity:
               349
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               223, 0
               

               Conread position:
               36-530
               

               Cow position:
               
               

               Alignm length:
               500
               

               Alignm identity:
               377
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 98
               

               Conread position:
               36-530
               

               Cow position:
               
               

               Alignm length:
               498
               

               Alignm identity:
               361
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 82
               

               Conread position:
               36-530
               

               Cow position:
               
               

               Alignm length:
               499
               

               Alignm identity:
               359
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               283, 227
               

               Conread position:
               36-530
               

               Cow position:
               
               

               Alignm length:
               503
               

               Alignm identity:
               348
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               201, 228
               

               Conread position:
               36-531
               

               Cow position:
               
               

               Alignm length:
               505
               

               Alignm identity:
               365
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 46
               

               Conread position:
               36-532
               

               Cow position:
               
               

               Alignm length:
               518
               

               Alignm identity:
               389
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 98
               

               Conread position:
               36-532
               

               Cow position:
               
               

               Alignm length:
               503
               

               Alignm identity:
               354
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               283, 175
               

               Conread position:
               36-534
               

               Cow position:
               
               

               Alignm length:
               506
               

               Alignm identity:
               385
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 83
               

               Conread position:
               37-355
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               216
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               142, 58
               

               Conread position:
               38-480
               

               Cow position:
               
               

               Alignm length:
               448
               

               Alignm identity:
               341
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 18
               

               Conread position:
               40-528
               

               Cow position:
               
               

               Alignm length:
               496
               

               Alignm identity:
               364
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               74, 79
               

               Conread position:
               40-530
               

               Cow position:
               
               

               Alignm length:
               498
               

               Alignm identity:
               382
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               74, 79
               

               Conread position:
               40-530
               

               Cow position:
               
               

               Alignm length:
               495
               

               Alignm identity:
               378
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               74, 22
               

               Conread position:
               43-355
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               264, 157
               

               Conread position:
               43-530
               

               Cow position:
               
               

               Alignm length:
               495
               

               Alignm identity:
               372
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 75
               

               Conread position:
               43-530
               

               Cow position:
               
               

               Alignm length:
               496
               

               Alignm identity:
               353
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               195, 182
               

               Conread position:
               44-530
               

               Cow position:
               
               

               Alignm length:
               491
               

               Alignm identity:
               349
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               100, 220
               

               Conread position:
               44-532
               

               Cow position:
               
               

               Alignm length:
               498
               

               Alignm identity:
               350
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               269, 127
               

               Conread position:
               46-530
               

               Cow position:
               
               

               Alignm length:
               489
               

               Alignm identity:
               367
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 73
               

               Conread position:
               48-177
               

               Cow position:
               
               

               Alignm length:
               132
               

               Alignm identity:
               104
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               66, 71
               

               Conread position:
               48-342
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               257, 68
               

               Conread position:
               48-526
               

               Cow position:
               
               

               Alignm length:
               489
               

               Alignm identity:
               341
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               180, 221
               

               Conread position:
               49-440
               

               Cow position:
               
               

               Alignm length:
               392
               

               Alignm identity:
               264
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               56-534
               

               Cow position:
               
               

               Alignm length:
               492
               

               Alignm identity:
               336
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               155, 54
               

               Conread position:
               59-526
               

               Cow position:
               
               

               Alignm length:
               478
               

               Alignm identity:
               335
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               169, 210
               

               Conread position:
               59-530
               

               Cow position:
               
               

               Alignm length:
               481
               

               Alignm identity:
               341
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               156, 77
               

               Conread position:
               61-355
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               226
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               256, 202
               

               Conread position:
               62-530
               

               Cow position:
               
               

               Alignm length:
               478
               

               Alignm identity:
               341
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               145, 52
               

               Conread position:
               64-530
               

               Cow position:
               
               

               Alignm length:
               469
               

               Alignm identity:
               336
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 70
               

               Conread position:
               85-308
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               179
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 34
               

               Conread position:
               110-354
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               199
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               147, 164
               

               Conread position:
               118-534
               

               Cow position:
               
               

               Alignm length:
               421
               

               Alignm identity:
               304
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               295, 44
               

               Conread position:
               121-534
               

               Cow position:
               
               

               Alignm length:
               425
               

               Alignm identity:
               305
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               126, 12
               

               Conread position:
               215-534
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               96, 54
               
Show alignments to all cow chromosomes.