Cow genome map
| Conread name: | Liv1-LVRM10162A01 |
| Conread position: | 7-532 |
| Cow position: | chr7:67675883-67676384 (view UCSC Genome Browser custom track) |
| Alignm length: | 534 |
| Alignm identity: | 387 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 293, 22 |
| Conread position: | 31-322 |
| Cow position: | chr7:33759198-33759484 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 200 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 281, 12 |
| Conread position: | 31-354 |
| Cow position: | chr7:995321-995648 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 278, 7 |
| Conread position: | 31-354 |
| Cow position: | chr7:15810653-15810331 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 277, 6 |
| Conread position: | 31-530 |
| Cow position: | chr7:67429378-67429865 (view UCSC Genome Browser custom track) |
| Alignm length: | 509 |
| Alignm identity: | 375 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 279, 6 |
| Conread position: | 31-534 |
| Cow position: | chr7:59679653-59680145 (view UCSC Genome Browser custom track) |
| Alignm length: | 507 |
| Alignm identity: | 370 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 327, 6 |
| Conread position: | 31-535 |
| Cow position: | chr7:29471264-29471765 (view UCSC Genome Browser custom track) |
| Alignm length: | 520 |
| Alignm identity: | 390 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 110, 6 |
| Conread position: | 33-236 |
| Cow position: | chr7:59683990-59684190 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 113, 0 |
| Conread position: | 33-354 |
| Cow position: | chr7:19269622-19269305 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 282, 73 |
| Conread position: | 33-532 |
| Cow position: | chr7:25440316-25440795 (view UCSC Genome Browser custom track) |
| Alignm length: | 505 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 264, 82 |
| Conread position: | 33-533 |
| Cow position: | chr7:24058246-24058742 (view UCSC Genome Browser custom track) |
| Alignm length: | 513 |
| Alignm identity: | 356 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 273 |
| Conread position: | 33-534 |
| Cow position: | chr7:3156270-3156763 (view UCSC Genome Browser custom track) |
| Alignm length: | 511 |
| Alignm identity: | 392 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 235 |
| Conread position: | 33-534 |
| Cow position: | chr7:41875465-41874976 (view UCSC Genome Browser custom track) |
| Alignm length: | 514 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 221, 67 |
| Conread position: | 34-311 |
| Cow position: | chr7:7293854-7293580 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 193 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 188, 0 |
| Conread position: | 34-316 |
| Cow position: | chr7:7211189-7210910 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 204 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 229, 0 |
| Conread position: | 34-348 |
| Cow position: | chr7:33405433-33405120 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 100 |
| Conread position: | 34-361 |
| Cow position: | chr7:53358436-53358099 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 240 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 107, 214 |
| Conread position: | 34-458 |
| Cow position: | chr7:27787442-27787848 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 85 |
| Conread position: | 34-491 |
| Cow position: | chr7:21929957-21930389 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 283, 45 |
| Conread position: | 34-528 |
| Cow position: | chr7:1452450-1452932 (view UCSC Genome Browser custom track) |
| Alignm length: | 504 |
| Alignm identity: | 367 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 100 |
| Conread position: | 34-528 |
| Cow position: | chr7:67799642-67800111 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 375 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 45 |
| Conread position: | 34-530 |
| Cow position: | chr7:21126855-21126371 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 380 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 85 |
| Conread position: | 34-530 |
| Cow position: | chr7:21986234-21986708 (view UCSC Genome Browser custom track) |
| Alignm length: | 504 |
| Alignm identity: | 387 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 87 |
| Conread position: | 34-530 |
| Cow position: | chr7:67489516-67489989 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 330 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 96, 149 |
| Conread position: | 34-532 |
| Cow position: | chr7:27583910-27583431 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 426, 26 |
| Conread position: | 34-533 |
| Cow position: | chr7:52803853-52803400 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 342 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 135, 72 |
| Conread position: | 34-534 |
| Cow position: | chr7:51015072-51015555 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 380 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 286, 229 |
| Conread position: | 34-534 |
| Cow position: | chr7:54671274-54670757 (view UCSC Genome Browser custom track) |
| Alignm length: | 520 |
| Alignm identity: | 371 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 179, 162 |
| Conread position: | 34-534 |
| Cow position: | chr7:59138467-59138939 (view UCSC Genome Browser custom track) |
| Alignm length: | 505 |
| Alignm identity: | 355 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 176, 84 |
| Conread position: | 34-534 |
| Cow position: | chr7:67494917-67495399 (view UCSC Genome Browser custom track) |
| Alignm length: | 512 |
| Alignm identity: | 363 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 128, 66 |
| Conread position: | 35-353 |
| Cow position: | chr7:54643683-54643356 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 36-300 |
| Cow position: | chr7:60794492-60794228 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 195 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 229 |
| Conread position: | 36-311 |
| Cow position: | chr7:7257983-7258255 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 199 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 178, 0 |
| Conread position: | 36-314 |
| Cow position: | chr7:24807646-24807372 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 83 |
| Conread position: | 36-317 |
| Cow position: | chr7:49604560-49604841 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 179, 229 |
| Conread position: | 36-322 |
| Cow position: | chr7:6579997-6580281 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 227, 0 |
| Conread position: | 36-349 |
| Cow position: | chr7:445531-445228 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 83 |
| Conread position: | 36-355 |
| Cow position: | chr7:3300347-3300027 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 283, 227 |
| Conread position: | 36-412 |
| Cow position: | chr7:61578264-61578636 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 83 |
| Conread position: | 36-445 |
| Cow position: | chr7:8144431-8144030 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 105 |
| Conread position: | 36-468 |
| Cow position: | chr7:68481363-68481774 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 303 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 69, 81 |
| Conread position: | 36-521 |
| Cow position: | chr7:525785-526253 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 374 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 98 |
| Conread position: | 36-526 |
| Cow position: | chr7:545652-546131 (view UCSC Genome Browser custom track) |
| Alignm length: | 498 |
| Alignm identity: | 358 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 201, 228 |
| Conread position: | 36-528 |
| Cow position: | chr7:39792579-39793058 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 379 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 83 |
| Conread position: | 36-529 |
| Cow position: | chr7:5309299-5308824 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 377 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 60 |
| Conread position: | 36-530 |
| Cow position: | chr7:16064-15584 (view UCSC Genome Browser custom track) |
| Alignm length: | 498 |
| Alignm identity: | 356 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 290, 31 |
| Conread position: | 36-530 |
| Cow position: | chr7:1371836-1371353 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 379 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 63 |
| Conread position: | 36-530 |
| Cow position: | chr7:11447368-11447856 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 360 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 273, 227 |
| Conread position: | 36-530 |
| Cow position: | chr7:11463237-11462758 (view UCSC Genome Browser custom track) |
| Alignm length: | 497 |
| Alignm identity: | 359 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 201, 224 |
| Conread position: | 36-530 |
| Cow position: | chr7:14138787-14138304 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 385 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 83 |
| Conread position: | 36-530 |
| Cow position: | chr7:20514967-20514495 (view UCSC Genome Browser custom track) |
| Alignm length: | 498 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 290, 227 |
| Conread position: | 36-530 |
| Cow position: | chr7:21234204-21233717 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 367 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 101 |
| Conread position: | 36-530 |
| Cow position: | chr7:27101485-27100999 (view UCSC Genome Browser custom track) |
| Alignm length: | 504 |
| Alignm identity: | 361 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 271, 188 |
| Conread position: | 36-530 |
| Cow position: | chr7:34486725-34487205 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 388 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 83 |
| Conread position: | 36-530 |
| Cow position: | chr7:45948332-45947848 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 369 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 95 |
| Conread position: | 36-530 |
| Cow position: | chr7:46901263-46900780 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 359 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 31 |
| Conread position: | 36-530 |
| Cow position: | chr7:55537110-55536635 (view UCSC Genome Browser custom track) |
| Alignm length: | 505 |
| Alignm identity: | 376 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 26 |
| Conread position: | 36-530 |
| Cow position: | chr7:63386536-63387025 (view UCSC Genome Browser custom track) |
| Alignm length: | 506 |
| Alignm identity: | 372 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 228 |
| Conread position: | 36-530 |
| Cow position: | chr7:64240200-64239713 (view UCSC Genome Browser custom track) |
| Alignm length: | 504 |
| Alignm identity: | 378 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 233 |
| Conread position: | 36-532 |
| Cow position: | chr7:6647848-6647370 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 257, 227 |
| Conread position: | 36-532 |
| Cow position: | chr7:20798634-20798147 (view UCSC Genome Browser custom track) |
| Alignm length: | 504 |
| Alignm identity: | 367 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 228 |
| Conread position: | 36-533 |
| Cow position: | chr7:30118730-30118244 (view UCSC Genome Browser custom track) |
| Alignm length: | 513 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 222 |
| Conread position: | 36-534 |
| Cow position: | chr7:10430609-10430128 (view UCSC Genome Browser custom track) |
| Alignm length: | 505 |
| Alignm identity: | 386 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 44 |
| Conread position: | 36-534 |
| Cow position: | chr7:48635239-48635730 (view UCSC Genome Browser custom track) |
| Alignm length: | 504 |
| Alignm identity: | 371 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 314, 78 |
| Conread position: | 37-532 |
| Cow position: | chr7:42870953-42871437 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 387 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 272, 59 |
| Conread position: | 37-533 |
| Cow position: | chr7:29369212-29368731 (view UCSC Genome Browser custom track) |
| Alignm length: | 505 |
| Alignm identity: | 376 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 95 |
| Conread position: | 40-528 |
| Cow position: | chr7:38397628-38398105 (view UCSC Genome Browser custom track) |
| Alignm length: | 491 |
| Alignm identity: | 369 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 94 |
| Conread position: | 42-361 |
| Cow position: | chr7:65811647-65811969 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 195, 222 |
| Conread position: | 43-530 |
| Cow position: | chr7:20774516-20774043 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 286, 216 |
| Conread position: | 45-530 |
| Cow position: | chr7:13533082-13532615 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 368 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 74 |
| Conread position: | 46-530 |
| Cow position: | chr7:33332385-33332852 (view UCSC Genome Browser custom track) |
| Alignm length: | 491 |
| Alignm identity: | 387 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 272, 70 |
| Conread position: | 50-530 |
| Cow position: | chr7:58994417-58994876 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 361 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 268, 83 |
| Conread position: | 59-530 |
| Cow position: | chr7:14214535-14214077 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 361 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 206 |
| Conread position: | 62-491 |
| Cow position: | chr7:48805902-48805482 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 398, 197 |
| Conread position: | 63-504 |
| Cow position: | chr7:6720980-6721410 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 244, 200 |
| Conread position: | 68-479 |
| Cow position: | chr7:34150148-34150543 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 51 |
| Conread position: | 68-522 |
| Cow position: | chr7:20785133-20784693 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 241, 21 |
| Conread position: | 87-530 |
| Cow position: | chr7:33312090-33311659 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 232, 176 |
| Conread position: | 133-498 |
| Cow position: | chr7:25251056-25251392 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 254 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 133-534 |
| Cow position: | chr7:27606422-27606016 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 75 |
| Conread position: | 382-529 |
| Cow position: | chr7:58338248-58338105 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 26, 0 |
Show alignments to all cow chromosomes.