Cow genome map

Conread name: Liv1-LVRM10162A01

Conread position: 4-527
Cow position: chr8:41644713-41644199 (view UCSC Genome Browser custom track)
Alignm length: 536
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 172

Conread position: 6-355
Cow position: chr8:6064820-6064459 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 268

Conread position: 6-472
Cow position: chr8:28878146-28877681 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 121

Conread position: 6-526
Cow position: chr8:47068852-47068332 (view UCSC Genome Browser custom track)
Alignm length: 534
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 265

Conread position: 6-530
Cow position: chr8:27579351-27579873 (view UCSC Genome Browser custom track)
Alignm length: 539
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 267

Conread position: 6-532
Cow position: chr8:1153355-1152820 (view UCSC Genome Browser custom track)
Alignm length: 545
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 83

Conread position: 7-529
Cow position: chr8:25775711-25775195 (view UCSC Genome Browser custom track)
Alignm length: 538
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 61

Conread position: 25-534
Cow position: chr8:61080392-61079875 (view UCSC Genome Browser custom track)
Alignm length: 526
Alignm identity: 338
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 140, 90

Conread position: 31-133
Cow position: chr8:45449496-45449597 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 87
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 6, 0

Conread position: 31-322
Cow position: chr8:2170380-2170093 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 6

Conread position: 31-527
Cow position: chr8:11969290-11968803 (view UCSC Genome Browser custom track)
Alignm length: 511
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 240, 6

Conread position: 31-531
Cow position: chr8:11564530-11565007 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 414, 6

Conread position: 31-534
Cow position: chr8:45692035-45691530 (view UCSC Genome Browser custom track)
Alignm length: 516
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 237

Conread position: 32-514
Cow position: chr8:11762932-11763387 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 229

Conread position: 33-529
Cow position: chr8:30487388-30486903 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 281, 110

Conread position: 33-530
Cow position: chr8:23771631-23772119 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 86

Conread position: 33-530
Cow position: chr8:25408724-25409206 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 86

Conread position: 33-532
Cow position: chr8:49859767-49859285 (view UCSC Genome Browser custom track)
Alignm length: 507
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 282, 86

Conread position: 33-534
Cow position: chr8:56883495-56884003 (view UCSC Genome Browser custom track)
Alignm length: 514
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 230, 21

Conread position: 34-354
Cow position: chr8:4785875-4785561 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 86

Conread position: 34-354
Cow position: chr8:59141318-59141641 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 273, 218

Conread position: 34-454
Cow position: chr8:25417858-25417455 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 100

Conread position: 34-457
Cow position: chr8:8315466-8315054 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 275, 225

Conread position: 34-527
Cow position: chr8:42579584-42579111 (view UCSC Genome Browser custom track)
Alignm length: 496
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 274, 224

Conread position: 34-530
Cow position: chr8:50994770-50995248 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 32

Conread position: 34-531
Cow position: chr8:8308589-8309084 (view UCSC Genome Browser custom track)
Alignm length: 506
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 316, 226

Conread position: 34-534
Cow position: chr8:11802816-11803304 (view UCSC Genome Browser custom track)
Alignm length: 508
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 101

Conread position: 34-534
Cow position: chr8:38606206-38605729 (view UCSC Genome Browser custom track)
Alignm length: 509
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 28

Conread position: 35-530
Cow position: chr8:51666828-51666343 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 100

Conread position: 36-288
Cow position: chr8:49215438-49215688 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 98

Conread position: 36-355
Cow position: chr8:30891319-30890999 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 290, 227

Conread position: 36-427
Cow position: chr8:12801126-12801502 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 273
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 110, 184

Conread position: 36-458
Cow position: chr8:8556151-8555743 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 290, 31

Conread position: 36-468
Cow position: chr8:38391654-38392057 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 83

Conread position: 36-528
Cow position: chr8:4687399-4687873 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 98

Conread position: 36-529
Cow position: chr8:42419440-42418954 (view UCSC Genome Browser custom track)
Alignm length: 497
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 65

Conread position: 36-530
Cow position: chr8:2886745-2887225 (view UCSC Genome Browser custom track)
Alignm length: 496
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 424, 23

Conread position: 36-530
Cow position: chr8:3785633-3786115 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 98

Conread position: 36-530
Cow position: chr8:3856018-3855549 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 83

Conread position: 36-530
Cow position: chr8:5017176-5017658 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 83

Conread position: 36-530
Cow position: chr8:7161894-7162374 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 83

Conread position: 36-530
Cow position: chr8:8401118-8400636 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 83

Conread position: 36-530
Cow position: chr8:14927882-14927405 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 83

Conread position: 36-530
Cow position: chr8:17312020-17312506 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 83

Conread position: 36-530
Cow position: chr8:22571313-22570831 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 227

Conread position: 36-530
Cow position: chr8:24915339-24914855 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 83

Conread position: 36-530
Cow position: chr8:32041749-32041285 (view UCSC Genome Browser custom track)
Alignm length: 496
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 411, 199

Conread position: 36-530
Cow position: chr8:32318554-32318074 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 63

Conread position: 36-530
Cow position: chr8:33589372-33589856 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 83

Conread position: 36-530
Cow position: chr8:34348670-34349149 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 290, 227

Conread position: 36-530
Cow position: chr8:36635502-36635029 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 83

Conread position: 36-530
Cow position: chr8:37654871-37654385 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 201, 232

Conread position: 36-530
Cow position: chr8:37932087-37932573 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 290, 227

Conread position: 36-530
Cow position: chr8:39195212-39194740 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 20

Conread position: 36-530
Cow position: chr8:46051184-46051657 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 83

Conread position: 36-530
Cow position: chr8:47661323-47660842 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 83

Conread position: 36-530
Cow position: chr8:50287926-50287450 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 13

Conread position: 36-530
Cow position: chr8:50930133-50929638 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 83

Conread position: 36-530
Cow position: chr8:60061380-60061878 (view UCSC Genome Browser custom track)
Alignm length: 509
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 83

Conread position: 36-532
Cow position: chr8:1320039-1320521 (view UCSC Genome Browser custom track)
Alignm length: 506
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 79

Conread position: 36-532
Cow position: chr8:9736235-9736722 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 209, 229

Conread position: 36-532
Cow position: chr8:32631031-32630555 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 280, 227

Conread position: 36-534
Cow position: chr8:20136614-20136093 (view UCSC Genome Browser custom track)
Alignm length: 525
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 235, 395

Conread position: 36-534
Cow position: chr8:42484913-42485398 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 83

Conread position: 36-534
Cow position: chr8:59261921-59261446 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 40

Conread position: 37-545
Cow position: chr8:76578-76102 (view UCSC Genome Browser custom track)
Alignm length: 510
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 428, 56

Conread position: 38-536
Cow position: chr8:42468662-42469140 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 300, 92

Conread position: 40-346
Cow position: chr8:44243580-44243276 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 79

Conread position: 40-530
Cow position: chr8:8911508-8911958 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 79

Conread position: 40-530
Cow position: chr8:14590901-14590422 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 80

Conread position: 40-530
Cow position: chr8:25523408-25523877 (view UCSC Genome Browser custom track)
Alignm length: 496
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 22

Conread position: 40-534
Cow position: chr8:11832710-11833214 (view UCSC Genome Browser custom track)
Alignm length: 510
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 94

Conread position: 43-521
Cow position: chr8:29007646-29008106 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 76

Conread position: 43-530
Cow position: chr8:10742662-10742190 (view UCSC Genome Browser custom track)
Alignm length: 494
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 26

Conread position: 43-530
Cow position: chr8:22128576-22129050 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 266, 42

Conread position: 44-355
Cow position: chr8:8517582-8517266 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 218
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 86, 56

Conread position: 44-530
Cow position: chr8:61906164-61906638 (view UCSC Genome Browser custom track)
Alignm length: 492
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 194, 220

Conread position: 45-306
Cow position: chr8:36534278-36534017 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 172
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 52, 59

Conread position: 46-534
Cow position: chr8:42158980-42158514 (view UCSC Genome Browser custom track)
Alignm length: 492
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 280, 217

Conread position: 59-355
Cow position: chr8:2447245-2447542 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 267, 204

Conread position: 59-530
Cow position: chr8:19330733-19331191 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 12

Conread position: 63-355
Cow position: chr8:53430093-53430373 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 208
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 254, 52

Conread position: 99-354
Cow position: chr8:45450364-45450621 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 171

Conread position: 105-535
Cow position: chr8:50960531-50960119 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 38

Conread position: 106-529
Cow position: chr8:12450085-12450501 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 13

Conread position: 144-501
Cow position: chr8:47886994-47887331 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 175, 126

Conread position: 169-455
Cow position: chr8:45449908-45450174 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 220
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 146, 50

Conread position: 169-534
Cow position: chr8:47673979-47674326 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 100

Conread position: 291-534
Cow position: chr8:31984378-31984610 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 173
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 156, 70

Conread position: 375-533
Cow position: chr8:12542581-12542420 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 132
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 40, 153

Show alignments to all cow chromosomes.