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Cow genome map

           
Conread name:
           
Liv1-LVRM1B030176
        

               
Conread position:
               
180-677
               

               
Cow position:
               
chr10:38014695-38014197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
397, 267
               

               
Conread position:
               
252-672
               

               
Cow position:
               
chr10:56392021-56392439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
333, 296
               

               
Conread position:
               
275-677
               

               
Cow position:
               
chr10:17176286-17175866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
7, 86
               

               
Conread position:
               
290-645
               

               
Cow position:
               
chr10:36531508-36531868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
48, 19
               

               
Conread position:
               
292-677
               

               
Cow position:
               
chr10:1424041-1423666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
24, 16
               

               
Conread position:
               
292-677
               

               
Cow position:
               
chr10:45965708-45965332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
98, 27
               

               
Conread position:
               
294-677
               

               
Cow position:
               
chr10:11081189-11080793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 0
               

               
Conread position:
               
297-677
               

               
Cow position:
               
chr10:40738200-40737834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
368, 36
               

               
Conread position:
               
298-625
               

               
Cow position:
               
chr10:31528172-31527861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
263, 19
               

               
Conread position:
               
302-640
               

               
Cow position:
               
chr10:60446935-60446601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
201, 27
               

               
Conread position:
               
304-677
               

               
Cow position:
               
chr10:46195984-46195614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
281, 87
               

               
Conread position:
               
304-677
               

               
Cow position:
               
chr10:59572095-59571733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
281, 10
               

               
Conread position:
               
305-655
               

               
Cow position:
               
chr10:15248837-15249191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
9, 27
               

               
Conread position:
               
305-666
               

               
Cow position:
               
chr10:38944463-38944100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
29, 132
               

               
Conread position:
               
306-595
               

               
Cow position:
               
chr10:34646253-34646535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
27, 60
               

               
Conread position:
               
306-672
               

               
Cow position:
               
chr10:52695532-52695892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
256, 12
               

               
Conread position:
               
307-677
               

               
Cow position:
               
chr10:61588056-61588431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
30, 22
               

               
Conread position:
               
308-671
               

               
Cow position:
               
chr10:14947455-14947100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 84
               

               
Conread position:
               
308-676
               

               
Cow position:
               
chr10:35867818-35868165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 30
               

               
Conread position:
               
308-677
               

               
Cow position:
               
chr10:2613562-2613198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 25
               

               
Conread position:
               
309-525
               

               
Cow position:
               
chr10:58650993-58651202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
15, 56
               

               
Conread position:
               
309-677
               

               
Cow position:
               
chr10:56475655-56475297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
25, 80
               

               
Conread position:
               
310-513
               

               
Cow position:
               
chr10:43441910-43442109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
65, 9
               

               
Conread position:
               
310-546
               

               
Cow position:
               
chr10:62454165-62454406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
12, 7
               

               
Conread position:
               
310-580
               

               
Cow position:
               
chr10:20485365-20485637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
80, 17
               

               
Conread position:
               
310-677
               

               
Cow position:
               
chr10:52569794-52569423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
22, 324
               

               
Conread position:
               
311-476
               

               
Cow position:
               
chr10:33694568-33694408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
27, 82
               

               
Conread position:
               
311-531
               

               
Cow position:
               
chr10:2984869-2985096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
79, 69
               

               
Conread position:
               
311-561
               

               
Cow position:
               
chr10:10027770-10027523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
79, 8
               

               
Conread position:
               
311-570
               

               
Cow position:
               
chr10:2185558-2185289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
7, 179
               

               
Conread position:
               
311-675
               

               
Cow position:
               
chr10:65345266-65345635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
20, 259
               

               
Conread position:
               
311-676
               

               
Cow position:
               
chr10:10469159-10468813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
269, 26
               

               
Conread position:
               
311-677
               

               
Cow position:
               
chr10:16598892-16598518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 120
               

               
Conread position:
               
312-562
               

               
Cow position:
               
chr10:1698544-1698803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
25, 140
               

               
Conread position:
               
312-636
               

               
Cow position:
               
chr10:6365687-6365354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
22, 123
               

               
Conread position:
               
312-677
               

               
Cow position:
               
chr10:28176206-28176558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
7, 22
               

               
Conread position:
               
312-677
               

               
Cow position:
               
chr10:40107297-40106938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 21
               

               
Conread position:
               
313-470
               

               
Cow position:
               
chr10:48130210-48130056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
313-578
               

               
Cow position:
               
chr10:68208456-68208178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
313-621
               

               
Cow position:
               
chr10:19539629-19539932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
25, 31
               

               
Conread position:
               
314-627
               

               
Cow position:
               
chr10:26631600-26631291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
267, 91
               

               
Conread position:
               
314-636
               

               
Cow position:
               
chr10:55577522-55577191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
24, 138
               

               
Conread position:
               
314-642
               

               
Cow position:
               
chr10:39124328-39123996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 23
               

               
Conread position:
               
314-646
               

               
Cow position:
               
chr10:45294949-45295277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
80, 16
               

               
Conread position:
               
314-676
               

               
Cow position:
               
chr10:45658333-45657977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
247, 62
               

               
Conread position:
               
314-677
               

               
Cow position:
               
chr10:35731334-35731691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
271, 81
               

               
Conread position:
               
314-677
               

               
Cow position:
               
chr10:43487912-43487542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
19, 38
               

               
Conread position:
               
314-677
               

               
Cow position:
               
chr10:45371252-45370886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 186
               

               
Conread position:
               
314-677
               

               
Cow position:
               
chr10:50182863-50183217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
257, 15
               

               
Conread position:
               
315-514
               

               
Cow position:
               
chr10:36855936-36856136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
75, 16
               

               
Conread position:
               
315-547
               

               
Cow position:
               
chr10:7835407-7835624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
315-556
               

               
Cow position:
               
chr10:35090245-35090002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
74, 136
               

               
Conread position:
               
315-618
               

               
Cow position:
               
chr10:42230999-42230680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
23, 124
               

               
Conread position:
               
315-656
               

               
Cow position:
               
chr10:49455901-49456234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
17, 66
               

               
Conread position:
               
315-670
               

               
Cow position:
               
chr10:19191944-19191615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
315-677
               

               
Cow position:
               
chr10:11463467-11463835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
75, 139
               

               
Conread position:
               
315-677
               

               
Cow position:
               
chr10:17844956-17844595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
270, 16
               

               
Conread position:
               
315-677
               

               
Cow position:
               
chr10:24560795-24561153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 126
               

               
Conread position:
               
316-496
               

               
Cow position:
               
chr10:58065996-58066176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
81, 52
               

               
Conread position:
               
316-502
               

               
Cow position:
               
chr10:17065836-17065653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
172, 24
               

               
Conread position:
               
316-508
               

               
Cow position:
               
chr10:31059941-31060128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
14, 44
               

               
Conread position:
               
316-517
               

               
Cow position:
               
chr10:18751284-18751483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
316-568
               

               
Cow position:
               
chr10:23379323-23379075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
24, 65
               

               
Conread position:
               
316-570
               

               
Cow position:
               
chr10:1054580-1054347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
316-648
               

               
Cow position:
               
chr10:41626780-41626456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
74, 17
               

               
Conread position:
               
316-677
               

               
Cow position:
               
chr10:5151541-5151182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 14
               

               
Conread position:
               
317-516
               

               
Cow position:
               
chr10:29373183-29373381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
71, 12
               

               
Conread position:
               
317-517
               

               
Cow position:
               
chr10:27136496-27136696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
77, 14
               

               
Conread position:
               
317-523
               

               
Cow position:
               
chr10:14188425-14188624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
317-529
               

               
Cow position:
               
chr10:46799329-46799122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
13, 61
               

               
Conread position:
               
317-532
               

               
Cow position:
               
chr10:55043453-55043665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
73, 13
               

               
Conread position:
               
317-533
               

               
Cow position:
               
chr10:26102960-26103161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
317-539
               

               
Cow position:
               
chr10:48377200-48377427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
16, 178
               

               
Conread position:
               
317-550
               

               
Cow position:
               
chr10:16830195-16830427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
73, 14
               

               
Conread position:
               
317-558
               

               
Cow position:
               
chr10:23310836-23311076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
95, 20
               

               
Conread position:
               
317-638
               

               
Cow position:
               
chr10:23026682-23026373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
50, 20
               

               
Conread position:
               
317-651
               

               
Cow position:
               
chr10:763096-762777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
317-656
               

               
Cow position:
               
chr10:29102145-29102481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
14, 117
               

               
Conread position:
               
317-657
               

               
Cow position:
               
chr10:38430379-38430713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
115, 13
               

               
Conread position:
               
317-657
               

               
Cow position:
               
chr10:47543260-47542938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
329, 16
               

               
Conread position:
               
317-664
               

               
Cow position:
               
chr10:54962526-54962883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
13, 54
               

               
Conread position:
               
317-677
               

               
Cow position:
               
chr10:6490069-6489701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
317-677
               

               
Cow position:
               
chr10:9675272-9675626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 11
               

               
Conread position:
               
317-677
               

               
Cow position:
               
chr10:15817607-15817961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
205, 40
               

               
Conread position:
               
317-677
               

               
Cow position:
               
chr10:24871359-24870996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 16
               

               
Conread position:
               
317-677
               

               
Cow position:
               
chr10:35901512-35901161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
73, 111
               

               
Conread position:
               
318-471
               

               
Cow position:
               
chr10:32440389-32440238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
76, 15
               

               
Conread position:
               
318-518
               

               
Cow position:
               
chr10:28843551-28843349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
20, 132
               

               
Conread position:
               
318-523
               

               
Cow position:
               
chr10:11060341-11060541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
20, 73
               

               
Conread position:
               
318-528
               

               
Cow position:
               
chr10:28223406-28223195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
72, 133
               

               
Conread position:
               
318-531
               

               
Cow position:
               
chr10:6719168-6718952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
20, 83
               

               
Conread position:
               
318-595
               

               
Cow position:
               
chr10:23346117-23346390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
267, 73
               

               
Conread position:
               
318-630
               

               
Cow position:
               
chr10:19099023-19098716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
20, 84
               

               
Conread position:
               
318-650
               

               
Cow position:
               
chr10:58451191-58451513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
267, 43
               

               
Conread position:
               
318-677
               

               
Cow position:
               
chr10:62220033-62219655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
15, 371
               

               
Conread position:
               
318-677
               

               
Cow position:
               
chr10:69587491-69587848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
22, 41
               

               
Conread position:
               
319-479
               

               
Cow position:
               
chr10:60240034-60240189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
319-488
               

               
Cow position:
               
chr10:8891098-8891268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
319-494
               

               
Cow position:
               
chr10:18849713-18849538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
19, 82
               

               
Conread position:
               
319-497
               

               
Cow position:
               
chr10:21348807-21348975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
319-497
               

               
Cow position:
               
chr10:47430014-47429838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
15, 78
               

               
Conread position:
               
319-497
               

               
Cow position:
               
chr10:52152988-52152807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
21, 82
               

               
Conread position:
               
319-523
               

               
Cow position:
               
chr10:55069395-55069195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
319-525
               

               
Cow position:
               
chr10:44513072-44513278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
48, 72
               

               
Conread position:
               
319-526
               

               
Cow position:
               
chr10:5784065-5784271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
71, 14
               

               
Conread position:
               
319-526
               

               
Cow position:
               
chr10:34903663-34903462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
11, 77
               

               
Conread position:
               
319-528
               

               
Cow position:
               
chr10:7089529-7089324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
188, 71
               

               
Conread position:
               
319-530
               

               
Cow position:
               
chr10:24971142-24971347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 71
               

               
Conread position:
               
319-534
               

               
Cow position:
               
chr10:49862652-49862445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
319-538
               

               
Cow position:
               
chr10:3276157-3275947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
319-538
               

               
Cow position:
               
chr10:54548691-54548484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
319-544
               

               
Cow position:
               
chr10:39258302-39258530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
97, 139
               

               
Conread position:
               
319-562
               

               
Cow position:
               
chr10:45337875-45337627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
319-563
               

               
Cow position:
               
chr10:38995424-38995175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
319-583
               

               
Cow position:
               
chr10:41676226-41676484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
199, 71
               

               
Conread position:
               
319-622
               

               
Cow position:
               
chr10:61509758-61510054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
266, 76
               

               
Conread position:
               
319-629
               

               
Cow position:
               
chr10:37425952-37426259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
254, 11
               

               
Conread position:
               
319-639
               

               
Cow position:
               
chr10:52881425-52881750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
14, 48
               

               
Conread position:
               
319-640
               

               
Cow position:
               
chr10:8449697-8449367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 14
               

               
Conread position:
               
319-642
               

               
Cow position:
               
chr10:4151743-4151413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 258
               

               
Conread position:
               
319-643
               

               
Cow position:
               
chr10:42637422-42637092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
14, 44
               

               
Conread position:
               
319-650
               

               
Cow position:
               
chr10:25936430-25936100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
21, 180
               

               
Conread position:
               
319-650
               

               
Cow position:
               
chr10:53076319-53075980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 261
               

               
Conread position:
               
319-655
               

               
Cow position:
               
chr10:61921954-61922285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 71
               

               
Conread position:
               
319-664
               

               
Cow position:
               
chr10:16986522-16986173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
97, 14
               

               
Conread position:
               
319-664
               

               
Cow position:
               
chr10:37512051-37512401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
71, 46
               

               
Conread position:
               
319-666
               

               
Cow position:
               
chr10:25150077-25149737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
21, 93
               

               
Conread position:
               
319-670
               

               
Cow position:
               
chr10:2704373-2704048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
319-672
               

               
Cow position:
               
chr10:26013-25664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
43, 19
               

               
Conread position:
               
319-672
               

               
Cow position:
               
chr10:8161696-8161334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
15, 135
               

               
Conread position:
               
319-673
               

               
Cow position:
               
chr10:16644996-16645355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
21, 61
               

               
Conread position:
               
319-673
               

               
Cow position:
               
chr10:34661143-34661478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
282, 45
               

               
Conread position:
               
319-673
               

               
Cow position:
               
chr10:37818367-37818721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 75
               

               
Conread position:
               
319-676
               

               
Cow position:
               
chr10:24312701-24313056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
21, 97
               

               
Conread position:
               
319-676
               

               
Cow position:
               
chr10:62353646-62353296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 76
               

               
Conread position:
               
319-677
               

               
Cow position:
               
chr10:1978482-1978828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 91
               

               
Conread position:
               
319-677
               

               
Cow position:
               
chr10:9656332-9656709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
14, 99
               

               
Conread position:
               
319-677
               

               
Cow position:
               
chr10:41408458-41408115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
11, 74
               

               
Conread position:
               
319-677
               

               
Cow position:
               
chr10:50609759-50609373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 315
               

               
Conread position:
               
319-677
               

               
Cow position:
               
chr10:57059084-57059450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 218
               

               
Conread position:
               
320-497
               

               
Cow position:
               
chr10:1417778-1417609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
320-512
               

               
Cow position:
               
chr10:22972818-22973008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
320-514
               

               
Cow position:
               
chr10:57095017-57095205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
320-521
               

               
Cow position:
               
chr10:2260346-2260133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
17, 201
               

               
Conread position:
               
320-527
               

               
Cow position:
               
chr10:37507963-37508165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
11, 76
               

               
Conread position:
               
320-560
               

               
Cow position:
               
chr10:30746866-30746625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
9, 145
               

               
Conread position:
               
320-570
               

               
Cow position:
               
chr10:6242335-6242570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
320-583
               

               
Cow position:
               
chr10:43586096-43586359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
34, 71
               

               
Conread position:
               
320-632
               

               
Cow position:
               
chr10:15868446-15868126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 256
               

               
Conread position:
               
320-638
               

               
Cow position:
               
chr10:31004828-31005148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
77, 17
               

               
Conread position:
               
320-640
               

               
Cow position:
               
chr10:12652012-12651706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
106, 16
               

               
Conread position:
               
320-640
               

               
Cow position:
               
chr10:25342771-25342471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
14, 71
               

               
Conread position:
               
320-671
               

               
Cow position:
               
chr10:10148835-10148492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 10
               

               
Conread position:
               
320-671
               

               
Cow position:
               
chr10:49146693-49146358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
320-672
               

               
Cow position:
               
chr10:17073180-17073522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
320-672
               

               
Cow position:
               
chr10:42313092-42312743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
95, 13
               

               
Conread position:
               
320-673
               

               
Cow position:
               
chr10:38241268-38240919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
70, 79
               

               
Conread position:
               
320-677
               

               
Cow position:
               
chr10:39228351-39227977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
321-486
               

               
Cow position:
               
chr10:10104967-10104804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
18, 75
               

               
Conread position:
               
321-491
               

               
Cow position:
               
chr10:25142349-25142518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
159, 0
               

               
Conread position:
               
321-499
               

               
Cow position:
               
chr10:61039306-61039129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
73, 90
               

               
Conread position:
               
321-517
               

               
Cow position:
               
chr10:19503092-19503291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
321-525
               

               
Cow position:
               
chr10:17448023-17448214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
321-558
               

               
Cow position:
               
chr10:47159394-47159166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
13, 45
               

               
Conread position:
               
321-559
               

               
Cow position:
               
chr10:55599969-55600206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
46, 15
               

               
Conread position:
               
321-561
               

               
Cow position:
               
chr10:47182379-47182620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
69, 129
               

               
Conread position:
               
321-568
               

               
Cow position:
               
chr10:32080453-32080216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
321-583
               

               
Cow position:
               
chr10:2535750-2535495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
16, 45
               

               
Conread position:
               
321-595
               

               
Cow position:
               
chr10:60491076-60491345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 154
               

               
Conread position:
               
321-648
               

               
Cow position:
               
chr10:55064080-55063754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
69, 49
               

               
Conread position:
               
321-657
               

               
Cow position:
               
chr10:33666031-33665690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 76
               

               
Conread position:
               
321-661
               

               
Cow position:
               
chr10:30369639-30369963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
17, 37
               

               
Conread position:
               
321-671
               

               
Cow position:
               
chr10:23506305-23506649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 9
               

               
Conread position:
               
321-676
               

               
Cow position:
               
chr10:13311931-13311568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 183
               

               
Conread position:
               
321-677
               

               
Cow position:
               
chr10:7817306-7816939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 35
               

               
Conread position:
               
321-677
               

               
Cow position:
               
chr10:10120374-10120030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
150, 44
               

               
Conread position:
               
321-677
               

               
Cow position:
               
chr10:10720483-10720841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 52
               

               
Conread position:
               
321-677
               

               
Cow position:
               
chr10:19895583-19895230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 111
               

               
Conread position:
               
321-677
               

               
Cow position:
               
chr10:37529088-37529434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
269, 12
               

               
Conread position:
               
321-677
               

               
Cow position:
               
chr10:63276578-63276221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
19, 60
               

               
Conread position:
               
322-507
               

               
Cow position:
               
chr10:27544637-27544455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
322-513
               

               
Cow position:
               
chr10:9959406-9959212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
18, 129
               

               
Conread position:
               
322-525
               

               
Cow position:
               
chr10:7786961-7786754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
322-528
               

               
Cow position:
               
chr10:58148984-58149188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
322-528
               

               
Cow position:
               
chr10:64394268-64394060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
68, 129
               

               
Conread position:
               
322-550
               

               
Cow position:
               
chr10:52125504-52125725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
12, 75
               

               
Conread position:
               
322-556
               

               
Cow position:
               
chr10:49634252-49634020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 70
               

               
Conread position:
               
322-619
               

               
Cow position:
               
chr10:22888632-22888926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
263, 36
               

               
Conread position:
               
322-668
               

               
Cow position:
               
chr10:17022384-17022723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 15
               

               
Conread position:
               
322-671
               

               
Cow position:
               
chr10:24756596-24756254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 44
               

               
Conread position:
               
322-677
               

               
Cow position:
               
chr10:1976133-1976489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
115, 21
               

               
Conread position:
               
322-677
               

               
Cow position:
               
chr10:1996488-1996830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
343, 73
               

               
Conread position:
               
322-677
               

               
Cow position:
               
chr10:3999089-3998735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
124, 19
               

               
Conread position:
               
322-677
               

               
Cow position:
               
chr10:44764307-44764673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
68, 15
               

               
Conread position:
               
323-559
               

               
Cow position:
               
chr10:39622180-39622403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
67, 10
               

               
Conread position:
               
323-677
               

               
Cow position:
               
chr10:14816975-14817330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
16, 143
               

               
Conread position:
               
324-486
               

               
Cow position:
               
chr10:35026891-35026728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
8, 62
               

               
Conread position:
               
324-528
               

               
Cow position:
               
chr10:64877521-64877730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
15, 102
               

               
Conread position:
               
324-541
               

               
Cow position:
               
chr10:20448104-20447884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
14, 47
               

               
Conread position:
               
324-644
               

               
Cow position:
               
chr10:37068237-37068548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
245, 71
               

               
Conread position:
               
324-677
               

               
Cow position:
               
chr10:10751800-10752146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
10, 196
               

               
Conread position:
               
325-673
               

               
Cow position:
               
chr10:35245770-35246104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
103, 66
               

               
Conread position:
               
326-643
               

               
Cow position:
               
chr10:32834993-32834689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
207, 52
               

               
Conread position:
               
326-657
               

               
Cow position:
               
chr10:6384707-6384387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
326-673
               

               
Cow position:
               
chr10:55733429-55733764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 7
               

               
Conread position:
               
326-677
               

               
Cow position:
               
chr10:22049453-22049087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
7, 54
               

               
Conread position:
               
327-497
               

               
Cow position:
               
chr10:38329826-38329655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
327-556
               

               
Cow position:
               
chr10:49923185-49923420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
327-657
               

               
Cow position:
               
chr10:66199525-66199858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
58, 119
               

               
Conread position:
               
327-677
               

               
Cow position:
               
chr10:28178636-28178977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
63, 6
               

               
Conread position:
               
327-677
               

               
Cow position:
               
chr10:28841133-28840788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
152, 38
               

               
Conread position:
               
327-677
               

               
Cow position:
               
chr10:39874958-39875314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 223
               

               
Conread position:
               
328-479
               

               
Cow position:
               
chr10:47785106-47785254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
62, 37
               

               
Conread position:
               
328-507
               

               
Cow position:
               
chr10:61171437-61171260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
61, 37
               

               
Conread position:
               
328-528
               

               
Cow position:
               
chr10:14542052-14541852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
91, 105
               

               
Conread position:
               
328-533
               

               
Cow position:
               
chr10:12253256-12253451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
136, 30
               

               
Conread position:
               
328-561
               

               
Cow position:
               
chr10:32127962-32127711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
328-673
               

               
Cow position:
               
chr10:4109760-4109425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
10, 64
               

               
Conread position:
               
328-673
               

               
Cow position:
               
chr10:54848957-54848612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
240, 67
               

               
Conread position:
               
328-673
               

               
Cow position:
               
chr10:60961126-60960775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
60, 246
               

               
Conread position:
               
328-676
               

               
Cow position:
               
chr10:60721973-60722316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
13, 28
               

               
Conread position:
               
328-677
               

               
Cow position:
               
chr10:54504783-54504437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
257, 104
               

               
Conread position:
               
328-677
               

               
Cow position:
               
chr10:58691083-58690724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
6, 42
               

               
Conread position:
               
328-677
               

               
Cow position:
               
chr10:65071502-65071142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
66, 244
               

               
Conread position:
               
329-503
               

               
Cow position:
               
chr10:38195795-38195970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
61, 121
               

               
Conread position:
               
329-508
               

               
Cow position:
               
chr10:30836853-30837035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
329-517
               

               
Cow position:
               
chr10:7309270-7309460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
329-525
               

               
Cow position:
               
chr10:49029827-49029639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
329-527
               

               
Cow position:
               
chr10:37375566-37375766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
329-530
               

               
Cow position:
               
chr10:40999036-40998835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
148, 66
               

               
Conread position:
               
329-530
               

               
Cow position:
               
chr10:59417059-59417256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
99, 62
               

               
Conread position:
               
329-530
               

               
Cow position:
               
chr10:65904419-65904225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
329-531
               

               
Cow position:
               
chr10:10829220-10829021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
92, 66
               

               
Conread position:
               
329-532
               

               
Cow position:
               
chr10:17077567-17077760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
329-533
               

               
Cow position:
               
chr10:43459875-43460076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
329-536
               

               
Cow position:
               
chr10:34705458-34705250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
61, 71
               

               
Conread position:
               
329-540
               

               
Cow position:
               
chr10:27178667-27178465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
9, 35
               

               
Conread position:
               
329-550
               

               
Cow position:
               
chr10:32929165-32928935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
329-550
               

               
Cow position:
               
chr10:38205538-38205751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
329-557
               

               
Cow position:
               
chr10:45623610-45623832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
182, 61
               

               
Conread position:
               
329-559
               

               
Cow position:
               
chr10:22980799-22981028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
10, 90
               

               
Conread position:
               
329-561
               

               
Cow position:
               
chr10:24830892-24831135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
10, 28
               

               
Conread position:
               
329-561
               

               
Cow position:
               
chr10:50042797-50042556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
61, 193
               

               
Conread position:
               
329-561
               

               
Cow position:
               
chr10:55382497-55382263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
329-562
               

               
Cow position:
               
chr10:704808-705048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
329-562
               

               
Cow position:
               
chr10:9309389-9309165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
5, 62
               

               
Conread position:
               
329-562
               

               
Cow position:
               
chr10:23341072-23340853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
65, 73
               

               
Conread position:
               
329-567
               

               
Cow position:
               
chr10:35605223-35604992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
329-568
               

               
Cow position:
               
chr10:17567924-17568160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
11, 24
               

               
Conread position:
               
329-582
               

               
Cow position:
               
chr10:11047026-11047270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
329-598
               

               
Cow position:
               
chr10:58043948-58044220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
176, 238
               

               
Conread position:
               
329-605
               

               
Cow position:
               
chr10:24448038-24447766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
140, 36
               

               
Conread position:
               
329-615
               

               
Cow position:
               
chr10:33084250-33084543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
47, 186
               

               
Conread position:
               
329-615
               

               
Cow position:
               
chr10:55395800-55396084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
235, 66
               

               
Conread position:
               
329-629
               

               
Cow position:
               
chr10:68572539-68572233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
21, 95
               

               
Conread position:
               
329-641
               

               
Cow position:
               
chr10:46327869-46327556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
256, 66
               

               
Conread position:
               
329-642
               

               
Cow position:
               
chr10:69934602-69934901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
11, 41
               

               
Conread position:
               
329-644
               

               
Cow position:
               
chr10:46850048-46849733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
9, 209
               

               
Conread position:
               
329-646
               

               
Cow position:
               
chr10:13586882-13586571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
40, 85
               

               
Conread position:
               
329-650
               

               
Cow position:
               
chr10:24004282-24004611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
329-650
               

               
Cow position:
               
chr10:27118784-27119108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 62
               

               
Conread position:
               
329-650
               

               
Cow position:
               
chr10:44771826-44771520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
256, 66
               

               
Conread position:
               
329-650
               

               
Cow position:
               
chr10:59009961-59010276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
272, 9
               

               
Conread position:
               
329-656
               

               
Cow position:
               
chr10:5599820-5600140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 225
               

               
Conread position:
               
329-657
               

               
Cow position:
               
chr10:50109719-50110055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
61, 124
               

               
Conread position:
               
329-665
               

               
Cow position:
               
chr10:69840527-69840173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
203, 61
               

               
Conread position:
               
329-666
               

               
Cow position:
               
chr10:28721957-28721629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
87, 119
               

               
Conread position:
               
329-666
               

               
Cow position:
               
chr10:49942653-49942314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
11, 212
               

               
Conread position:
               
329-671
               

               
Cow position:
               
chr10:5889580-5889932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
329-671
               

               
Cow position:
               
chr10:29166459-29166120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
61, 171
               

               
Conread position:
               
329-671
               

               
Cow position:
               
chr10:30787446-30787776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
58, 120
               

               
Conread position:
               
329-671
               

               
Cow position:
               
chr10:31534919-31534582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 260
               

               
Conread position:
               
329-671
               

               
Cow position:
               
chr10:50360107-50359759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
47, 152
               

               
Conread position:
               
329-671
               

               
Cow position:
               
chr10:51944537-51944196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 62
               

               
Conread position:
               
329-672
               

               
Cow position:
               
chr10:8404385-8404051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
152, 66
               

               
Conread position:
               
329-672
               

               
Cow position:
               
chr10:16414396-16414749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
96, 69
               

               
Conread position:
               
329-672
               

               
Cow position:
               
chr10:23912333-23912660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
89, 36
               

               
Conread position:
               
329-672
               

               
Cow position:
               
chr10:35792107-35791769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 72
               

               
Conread position:
               
329-673
               

               
Cow position:
               
chr10:37014817-37014471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 50
               

               
Conread position:
               
329-673
               

               
Cow position:
               
chr10:47690576-47690229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 40
               

               
Conread position:
               
329-673
               

               
Cow position:
               
chr10:64042263-64041921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
79, 66
               

               
Conread position:
               
329-676
               

               
Cow position:
               
chr10:6531987-6532319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
52, 35
               

               
Conread position:
               
329-676
               

               
Cow position:
               
chr10:34654932-34655280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 61
               

               
Conread position:
               
329-677
               

               
Cow position:
               
chr10:6436235-6435890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
241, 8
               

               
Conread position:
               
329-677
               

               
Cow position:
               
chr10:8093144-8093482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
234, 62
               

               
Conread position:
               
329-677
               

               
Cow position:
               
chr10:11966664-11967010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 111
               

               
Conread position:
               
329-677
               

               
Cow position:
               
chr10:13764985-13765333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 66
               

               
Conread position:
               
329-677
               

               
Cow position:
               
chr10:19372155-19372506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 232
               

               
Conread position:
               
329-677
               

               
Cow position:
               
chr10:20095946-20095589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 61
               

               
Conread position:
               
329-677
               

               
Cow position:
               
chr10:21082549-21082216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
329-677
               

               
Cow position:
               
chr10:21657589-21657255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
249, 9
               

               
Conread position:
               
329-677
               

               
Cow position:
               
chr10:22390777-22390420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 68
               

               
Conread position:
               
329-677
               

               
Cow position:
               
chr10:22616462-22616807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
47, 67
               

               
Conread position:
               
329-677
               

               
Cow position:
               
chr10:23055914-23056247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
232, 34
               

               
Conread position:
               
329-677
               

               
Cow position:
               
chr10:23576719-23576374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
215, 61
               

               
Conread position:
               
329-677
               

               
Cow position:
               
chr10:31027462-31027814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 63
               

               
Conread position:
               
329-677
               

               
Cow position:
               
chr10:31362040-31362376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
329-677
               

               
Cow position:
               
chr10:31400720-31401063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 35
               

               
Conread position:
               
329-677
               

               
Cow position:
               
chr10:32775286-32774940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
50, 71
               

               
Conread position:
               
329-677
               

               
Cow position:
               
chr10:37415961-37415620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
256, 64
               

               
Conread position:
               
329-677
               

               
Cow position:
               
chr10:44730294-44730647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
5, 124
               

               
Conread position:
               
329-677
               

               
Cow position:
               
chr10:45378822-45379173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
61, 71
               

               
Conread position:
               
329-677
               

               
Cow position:
               
chr10:45476039-45476383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
11, 123
               

               
Conread position:
               
329-677
               

               
Cow position:
               
chr10:45871697-45871348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
61, 214
               

               
Conread position:
               
329-677
               

               
Cow position:
               
chr10:51306515-51306161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
256, 81
               

               
Conread position:
               
329-677
               

               
Cow position:
               
chr10:52296677-52296332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 179
               

               
Conread position:
               
329-677
               

               
Cow position:
               
chr10:67626824-67627161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
249, 18
               

               
Conread position:
               
330-497
               

               
Cow position:
               
chr10:14668576-14668410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
97, 80
               

               
Conread position:
               
330-512
               

               
Cow position:
               
chr10:3986068-3985887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
330-571
               

               
Cow position:
               
chr10:17150049-17149819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
224, 14
               

               
Conread position:
               
330-571
               

               
Cow position:
               
chr10:43272863-43273106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
64, 40
               

               
Conread position:
               
330-636
               

               
Cow position:
               
chr10:38355924-38356232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
89, 123
               

               
Conread position:
               
330-649
               

               
Cow position:
               
chr10:51289422-51289119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
231, 64
               

               
Conread position:
               
330-669
               

               
Cow position:
               
chr10:40163756-40164094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
255, 60
               

               
Conread position:
               
330-673
               

               
Cow position:
               
chr10:37708848-37709198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
200, 60
               

               
Conread position:
               
330-677
               

               
Cow position:
               
chr10:63940949-63940605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 60
               

               
Conread position:
               
331-677
               

               
Cow position:
               
chr10:16093387-16093047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
255, 83
               

               
Conread position:
               
332-473
               

               
Cow position:
               
chr10:38133140-38132993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
332-512
               

               
Cow position:
               
chr10:15602002-15602184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
332-579
               

               
Cow position:
               
chr10:25822078-25822312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
181, 58
               

               
Conread position:
               
332-616
               

               
Cow position:
               
chr10:48407309-48407030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
252, 32
               

               
Conread position:
               
332-633
               

               
Cow position:
               
chr10:20391258-20391563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
58, 126
               

               
Conread position:
               
332-633
               

               
Cow position:
               
chr10:34674190-34673896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
332-637
               

               
Cow position:
               
chr10:7383441-7383739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
332-673
               

               
Cow position:
               
chr10:24753312-24752989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
112, 62
               

               
Conread position:
               
332-677
               

               
Cow position:
               
chr10:6720077-6719733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
58, 29
               

               
Conread position:
               
332-677
               

               
Cow position:
               
chr10:30353026-30352679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 58
               

               
Conread position:
               
332-677
               

               
Cow position:
               
chr10:47773896-47773561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
254, 33
               

               
Conread position:
               
332-677
               

               
Cow position:
               
chr10:62114861-62114520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
193, 31
               

               
Conread position:
               
333-488
               

               
Cow position:
               
chr10:25475707-25475554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
333-506
               

               
Cow position:
               
chr10:4329817-4329994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
333-508
               

               
Cow position:
               
chr10:16641755-16641930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
121, 57
               

               
Conread position:
               
333-530
               

               
Cow position:
               
chr10:19679280-19679077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
333-549
               

               
Cow position:
               
chr10:443747-443544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
333-557
               

               
Cow position:
               
chr10:23127806-23128034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
16, 35
               

               
Conread position:
               
333-558
               

               
Cow position:
               
chr10:10153180-10152961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
333-560
               

               
Cow position:
               
chr10:8853725-8853501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
333-561
               

               
Cow position:
               
chr10:58414396-58414630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
57, 33
               

               
Conread position:
               
333-562
               

               
Cow position:
               
chr10:14093075-14093295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
333-563
               

               
Cow position:
               
chr10:60697454-60697677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
333-565
               

               
Cow position:
               
chr10:31718206-31718439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
57, 95
               

               
Conread position:
               
333-605
               

               
Cow position:
               
chr10:66365479-66365197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
54, 198
               

               
Conread position:
               
333-616
               

               
Cow position:
               
chr10:63484812-63484534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
248, 57
               

               
Conread position:
               
333-617
               

               
Cow position:
               
chr10:46934603-46934893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
64, 240
               

               
Conread position:
               
333-617
               

               
Cow position:
               
chr10:48178514-48178245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
228, 37
               

               
Conread position:
               
333-618
               

               
Cow position:
               
chr10:66320905-66321192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
57, 115
               

               
Conread position:
               
333-630
               

               
Cow position:
               
chr10:33881605-33881904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
333-645
               

               
Cow position:
               
chr10:36399873-36400179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
57, 66
               

               
Conread position:
               
333-645
               

               
Cow position:
               
chr10:36400908-36401214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
57, 66
               

               
Conread position:
               
333-664
               

               
Cow position:
               
chr10:11009594-11009261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
62, 239
               

               
Conread position:
               
333-671
               

               
Cow position:
               
chr10:38133306-38133644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
57, 20
               

               
Conread position:
               
333-671
               

               
Cow position:
               
chr10:49846950-49846613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
46, 31
               

               
Conread position:
               
333-671
               

               
Cow position:
               
chr10:62286740-62286390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 336
               

               
Conread position:
               
333-673
               

               
Cow position:
               
chr10:10219822-10219481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
62, 238
               

               
Conread position:
               
333-673
               

               
Cow position:
               
chr10:20553354-20553018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
164, 32
               

               
Conread position:
               
333-673
               

               
Cow position:
               
chr10:48316769-48317121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
83, 174
               

               
Conread position:
               
333-676
               

               
Cow position:
               
chr10:33215967-33215633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
248, 52
               

               
Conread position:
               
333-676
               

               
Cow position:
               
chr10:34607739-34607394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
83, 94
               

               
Conread position:
               
333-676
               

               
Cow position:
               
chr10:38370277-38370626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
57, 67
               

               
Conread position:
               
333-677
               

               
Cow position:
               
chr10:7291640-7291965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
291, 35
               

               
Conread position:
               
333-677
               

               
Cow position:
               
chr10:7366600-7366954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 38
               

               
Conread position:
               
333-677
               

               
Cow position:
               
chr10:19394391-19394753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
57, 122
               

               
Conread position:
               
333-677
               

               
Cow position:
               
chr10:36490193-36489847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
57, 62
               

               
Conread position:
               
333-677
               

               
Cow position:
               
chr10:37235374-37235718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 77
               

               
Conread position:
               
333-677
               

               
Cow position:
               
chr10:50558755-50559096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
229, 60
               

               
Conread position:
               
333-677
               

               
Cow position:
               
chr10:56733203-56732868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
57, 37
               

               
Conread position:
               
333-677
               

               
Cow position:
               
chr10:60236925-60237262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
319, 87
               

               
Conread position:
               
333-677
               

               
Cow position:
               
chr10:63884121-63883784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
11, 63
               

               
Conread position:
               
333-677
               

               
Cow position:
               
chr10:67442946-67443274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
254, 62
               

               
Conread position:
               
334-559
               

               
Cow position:
               
chr10:10634386-10634169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
334-640
               

               
Cow position:
               
chr10:25913607-25913926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
56, 172
               

               
Conread position:
               
334-643
               

               
Cow position:
               
chr10:3364011-3364311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
189, 34
               

               
Conread position:
               
334-651
               

               
Cow position:
               
chr10:33195219-33194888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
334-672
               

               
Cow position:
               
chr10:57786510-57786176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 64
               

               
Conread position:
               
334-677
               

               
Cow position:
               
chr10:19104008-19104341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
57, 127
               

               
Conread position:
               
335-673
               

               
Cow position:
               
chr10:17837126-17836785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
55, 24
               

               
Conread position:
               
335-675
               

               
Cow position:
               
chr10:30224844-30224520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
159, 63
               

               
Conread position:
               
336-547
               

               
Cow position:
               
chr10:2857219-2857010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 75
               

               
Conread position:
               
337-526
               

               
Cow position:
               
chr10:60345751-60345925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
337-528
               

               
Cow position:
               
chr10:53563947-53564139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
87, 58
               

               
Conread position:
               
337-546
               

               
Cow position:
               
chr10:6516874-6516661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
53, 164
               

               
Conread position:
               
337-561
               

               
Cow position:
               
chr10:10138031-10137811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
207, 58
               

               
Conread position:
               
337-613
               

               
Cow position:
               
chr10:33573076-33573345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
93, 104
               

               
Conread position:
               
337-649
               

               
Cow position:
               
chr10:6664201-6663886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
222, 30
               

               
Conread position:
               
337-656
               

               
Cow position:
               
chr10:33914897-33915209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
312, 58
               

               
Conread position:
               
337-672
               

               
Cow position:
               
chr10:57461524-57461191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
241, 77
               

               
Conread position:
               
337-673
               

               
Cow position:
               
chr10:9575878-9576202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
337-676
               

               
Cow position:
               
chr10:39387619-39387292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
280, 54
               

               
Conread position:
               
337-676
               

               
Cow position:
               
chr10:54947973-54948304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
144, 53
               

               
Conread position:
               
337-677
               

               
Cow position:
               
chr10:4184374-4184023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
337-677
               

               
Cow position:
               
chr10:5543078-5543414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
64, 58
               

               
Conread position:
               
337-677
               

               
Cow position:
               
chr10:22509006-22509352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
53, 62
               

               
Conread position:
               
337-677
               

               
Cow position:
               
chr10:35862061-35862395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
315, 19
               

               
Conread position:
               
337-677
               

               
Cow position:
               
chr10:48462176-48462507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
309, 46
               

               
Conread position:
               
338-562
               

               
Cow position:
               
chr10:41116070-41115852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
338-677
               

               
Cow position:
               
chr10:18042352-18042016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 26
               

               
Conread position:
               
339-616
               

               
Cow position:
               
chr10:30216548-30216815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
221, 56
               

               
Conread position:
               
339-677
               

               
Cow position:
               
chr10:48257107-48257445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
210, 133
               

               
Conread position:
               
339-677
               

               
Cow position:
               
chr10:56828150-56828486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 57
               

               
Conread position:
               
340-562
               

               
Cow position:
               
chr10:51727257-51727472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
7, 61
               

               
Conread position:
               
340-575
               

               
Cow position:
               
chr10:49909925-49910174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
50, 76
               

               
Conread position:
               
341-560
               

               
Cow position:
               
chr10:23071575-23071795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
49, 180
               

               
Conread position:
               
341-677
               

               
Cow position:
               
chr10:30522897-30523235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
240, 54
               

               
Conread position:
               
341-677
               

               
Cow position:
               
chr10:42746077-42745747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
250, 27
               

               
Conread position:
               
342-568
               

               
Cow position:
               
chr10:55319659-55319436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
219, 53
               

               
Conread position:
               
342-569
               

               
Cow position:
               
chr10:30929719-30929949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
164, 63
               

               
Conread position:
               
342-671
               

               
Cow position:
               
chr10:57142038-57142374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 259
               

               
Conread position:
               
344-615
               

               
Cow position:
               
chr10:46262348-46262081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
76, 97
               

               
Conread position:
               
344-648
               

               
Cow position:
               
chr10:61982554-61982247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
66, 252
               

               
Conread position:
               
344-672
               

               
Cow position:
               
chr10:53674991-53674661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 65
               

               
Conread position:
               
345-524
               

               
Cow position:
               
chr10:49382800-49382970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
345-677
               

               
Cow position:
               
chr10:66194140-66194473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
65, 8
               

               
Conread position:
               
348-647
               

               
Cow position:
               
chr10:15309249-15309535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
139, 20
               

               
Conread position:
               
348-677
               

               
Cow position:
               
chr10:26577715-26577382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
42, 282
               

               
Conread position:
               
349-673
               

               
Cow position:
               
chr10:6505511-6505199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 67
               

               
Conread position:
               
350-637
               

               
Cow position:
               
chr10:58718811-58718516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
62, 18
               

               
Conread position:
               
350-671
               

               
Cow position:
               
chr10:6530349-6530034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 31
               

               
Conread position:
               
350-672
               

               
Cow position:
               
chr10:1488986-1488675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
73, 40
               

               
Conread position:
               
350-677
               

               
Cow position:
               
chr10:35802206-35802537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
130, 15
               

               
Conread position:
               
353-550
               

               
Cow position:
               
chr10:32503586-32503386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
353-562
               

               
Cow position:
               
chr10:54699550-54699758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
135, 42
               

               
Conread position:
               
361-662
               

               
Cow position:
               
chr10:42123442-42123748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
29, 90
               

               
Conread position:
               
361-677
               

               
Cow position:
               
chr10:61839730-61839428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
209, 19
               

               
Conread position:
               
363-638
               

               
Cow position:
               
chr10:21422017-21422289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
193, 32
               

               
Conread position:
               
363-677
               

               
Cow position:
               
chr10:37295526-37295831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
201, 0
               

               
Conread position:
               
363-677
               

               
Cow position:
               
chr10:52278869-52278562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 39
               

               
Conread position:
               
367-535
               

               
Cow position:
               
chr10:46941335-46941504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
61, 11
               

               
Conread position:
               
367-560
               

               
Cow position:
               
chr10:46886291-46886106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
367-677
               

               
Cow position:
               
chr10:29252303-29251997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 13
               

               
Conread position:
               
369-676
               

               
Cow position:
               
chr10:35902815-35903109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
50, 34
               

               
Conread position:
               
377-530
               

               
Cow position:
               
chr10:45370354-45370506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
122, 0
               

               
Conread position:
               
378-672
               

               
Cow position:
               
chr10:2538221-2537931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
207, 54
               

               
Conread position:
               
380-646
               

               
Cow position:
               
chr10:12919228-12919493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
63, 5
               

               
Conread position:
               
385-568
               

               
Cow position:
               
chr10:28429380-28429562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
385-615
               

               
Cow position:
               
chr10:29526777-29526999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
109, 0
               

               
Conread position:
               
385-672
               

               
Cow position:
               
chr10:15115739-15115452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 179
               

               
Conread position:
               
385-677
               

               
Cow position:
               
chr10:41802768-41803062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
70, 195
               

               
Conread position:
               
387-677
               

               
Cow position:
               
chr10:11213235-11212947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 140
               

               
Conread position:
               
388-556
               

               
Cow position:
               
chr10:17388959-17388793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
10, 24
               

               
Conread position:
               
388-560
               

               
Cow position:
               
chr10:35893785-35893956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
388-563
               

               
Cow position:
               
chr10:628109-627934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
15, 21
               

               
Conread position:
               
388-640
               

               
Cow position:
               
chr10:9578837-9579097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
131, 0
               

               
Conread position:
               
388-645
               

               
Cow position:
               
chr10:13316058-13315805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
169, 21
               

               
Conread position:
               
388-657
               

               
Cow position:
               
chr10:2304260-2304527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
108, 179
               

               
Conread position:
               
388-671
               

               
Cow position:
               
chr10:668987-668719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
78, 107
               

               
Conread position:
               
388-677
               

               
Cow position:
               
chr10:77491-77221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
268, 38
               

               
Conread position:
               
388-677
               

               
Cow position:
               
chr10:22396374-22396083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
189, 111
               

               
Conread position:
               
388-677
               

               
Cow position:
               
chr10:27749793-27749509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
32, 67
               

               
Conread position:
               
388-677
               

               
Cow position:
               
chr10:31791141-31791427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
180, 22
               

               
Conread position:
               
388-677
               

               
Cow position:
               
chr10:59163988-59164263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
389-650
               

               
Cow position:
               
chr10:46492873-46493139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
389-673
               

               
Cow position:
               
chr10:20132408-20132693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
263, 167
               

               
Conread position:
               
389-677
               

               
Cow position:
               
chr10:2449466-2449184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
168, 49
               

               
Conread position:
               
392-524
               

               
Cow position:
               
chr10:5096507-5096379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
393-561
               

               
Cow position:
               
chr10:17765853-17766024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
73, 107
               

               
Conread position:
               
393-583
               

               
Cow position:
               
chr10:42451140-42451324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
66, 90
               

               
Conread position:
               
393-597
               

               
Cow position:
               
chr10:37768419-37768213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
171, 44
               

               
Conread position:
               
393-605
               

               
Cow position:
               
chr10:17925957-17926175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
54, 158
               

               
Conread position:
               
393-638
               

               
Cow position:
               
chr10:15426965-15427196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
399-673
               

               
Cow position:
               
chr10:10135098-10134820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 174
               

               
Conread position:
               
399-677
               

               
Cow position:
               
chr10:22472435-22472150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
148, 200
               

               
Conread position:
               
399-677
               

               
Cow position:
               
chr10:59675142-59675419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
28, 166
               

               
Conread position:
               
400-677
               

               
Cow position:
               
chr10:49168925-49169222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
401-677
               

               
Cow position:
               
chr10:67288397-67288127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
184, 9
               

               
Conread position:
               
402-530
               

               
Cow position:
               
chr10:31812041-31812167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
402-650
               

               
Cow position:
               
chr10:65133052-65132818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
15, 83
               

               
Conread position:
               
403-668
               

               
Cow position:
               
chr10:6543831-6543563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 22
               

               
Conread position:
               
403-673
               

               
Cow position:
               
chr10:59588076-59588332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
70, 17
               

               
Conread position:
               
406-677
               

               
Cow position:
               
chr10:15462605-15462321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 21
               

               
Conread position:
               
407-530
               

               
Cow position:
               
chr10:17602231-17602354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
407-543
               

               
Cow position:
               
chr10:21515768-21515903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
407-640
               

               
Cow position:
               
chr10:52120840-52120608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
23, 169
               

               
Conread position:
               
407-677
               

               
Cow position:
               
chr10:721403-721133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
170, 84
               

               
Conread position:
               
408-638
               

               
Cow position:
               
chr10:29379859-29380091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
152, 10
               

               
Conread position:
               
408-672
               

               
Cow position:
               
chr10:4311274-4311024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
237, 153
               

               
Conread position:
               
408-677
               

               
Cow position:
               
chr10:4164371-4164099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
177, 0
               

               
Conread position:
               
411-512
               

               
Cow position:
               
chr10:29090507-29090607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
102
               

               
Alignm identity:
               
89
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
411-562
               

               
Cow position:
               
chr10:2695061-2694912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
10, 31
               

               
Conread position:
               
411-563
               

               
Cow position:
               
chr10:52827499-52827648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
17, 65
               

               
Conread position:
               
411-567
               

               
Cow position:
               
chr10:51223031-51223187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
411-624
               

               
Cow position:
               
chr10:49947783-49947993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
187, 15
               

               
Conread position:
               
411-656
               

               
Cow position:
               
chr10:31116772-31116538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
189, 43
               

               
Conread position:
               
411-657
               

               
Cow position:
               
chr10:24022185-24022426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
411-657
               

               
Cow position:
               
chr10:29919740-29919982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
174, 151
               

               
Conread position:
               
411-671
               

               
Cow position:
               
chr10:6665459-6665704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
8, 94
               

               
Conread position:
               
411-673
               

               
Cow position:
               
chr10:28395203-28395464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
150, 191
               

               
Conread position:
               
411-673
               

               
Cow position:
               
chr10:52046968-52046696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
106, 9
               

               
Conread position:
               
411-676
               

               
Cow position:
               
chr10:24375642-24375385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
411-676
               

               
Cow position:
               
chr10:35778803-35779069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
174, 51
               

               
Conread position:
               
411-676
               

               
Cow position:
               
chr10:43509098-43508823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
411-677
               

               
Cow position:
               
chr10:15871774-15872040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
93, 155
               

               
Conread position:
               
411-677
               

               
Cow position:
               
chr10:19549390-19549657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
238, 17
               

               
Conread position:
               
411-677
               

               
Cow position:
               
chr10:24132725-24132986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
174, 94
               

               
Conread position:
               
411-677
               

               
Cow position:
               
chr10:26209149-26209427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
153, 130
               

               
Conread position:
               
411-677
               

               
Cow position:
               
chr10:31373992-31374263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
71, 36
               

               
Conread position:
               
411-677
               

               
Cow position:
               
chr10:33067478-33067733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
104, 0
               

               
Conread position:
               
411-677
               

               
Cow position:
               
chr10:39109919-39110172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
61, 9
               

               
Conread position:
               
412-523
               

               
Cow position:
               
chr10:2000876-2000993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
118
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
412-567
               

               
Cow position:
               
chr10:49253459-49253309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
412-583
               

               
Cow position:
               
chr10:15425147-15424982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
412-598
               

               
Cow position:
               
chr10:53405570-53405386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
173, 152
               

               
Conread position:
               
412-622
               

               
Cow position:
               
chr10:13197734-13197951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
150, 162
               

               
Conread position:
               
412-657
               

               
Cow position:
               
chr10:28776448-28776202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
173, 131
               

               
Conread position:
               
412-676
               

               
Cow position:
               
chr10:47725041-47724780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
173, 38
               

               
Conread position:
               
412-677
               

               
Cow position:
               
chr10:51696838-51696574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 87
               

               
Conread position:
               
413-677
               

               
Cow position:
               
chr10:53357993-53357732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
17, 67
               

               
Conread position:
               
414-542
               

               
Cow position:
               
chr10:32403890-32404010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
414-597
               

               
Cow position:
               
chr10:973229-973051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
161, 72
               

               
Conread position:
               
414-610
               

               
Cow position:
               
chr10:54819361-54819164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
155, 80
               

               
Conread position:
               
414-677
               

               
Cow position:
               
chr10:24276630-24276901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
84, 262
               

               
Conread position:
               
415-648
               

               
Cow position:
               
chr10:6642984-6642745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
415-648
               

               
Cow position:
               
chr10:22433816-22434053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
109, 27
               

               
Conread position:
               
415-672
               

               
Cow position:
               
chr10:8934565-8934320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
415-676
               

               
Cow position:
               
chr10:747564-747297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
139, 0
               

               
Conread position:
               
415-676
               

               
Cow position:
               
chr10:38942526-38942260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
122, 0
               

               
Conread position:
               
415-677
               

               
Cow position:
               
chr10:23886366-23886618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
415-677
               

               
Cow position:
               
chr10:28104984-28105251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
415-677
               

               
Cow position:
               
chr10:55122901-55122625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
157, 0
               

               
Conread position:
               
416-528
               

               
Cow position:
               
chr10:33462292-33462404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
113
               

               
Alignm identity:
               
89
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
416-562
               

               
Cow position:
               
chr10:25466160-25466014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
17, 32
               

               
Conread position:
               
416-562
               

               
Cow position:
               
chr10:56180657-56180511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
416-576
               

               
Cow position:
               
chr10:40744206-40744049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
416-577
               

               
Cow position:
               
chr10:24902891-24903051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
148, 0
               

               
Conread position:
               
416-602
               

               
Cow position:
               
chr10:24929833-24929646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
154, 45
               

               
Conread position:
               
416-629
               

               
Cow position:
               
chr10:34660149-34660362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
142, 180
               

               
Conread position:
               
416-650
               

               
Cow position:
               
chr10:10750155-10750394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
416-650
               

               
Cow position:
               
chr10:50533775-50534011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
158, 89
               

               
Conread position:
               
416-652
               

               
Cow position:
               
chr10:30360612-30360376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
169, 61
               

               
Conread position:
               
416-653
               

               
Cow position:
               
chr10:22633532-22633769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
169, 154
               

               
Conread position:
               
416-667
               

               
Cow position:
               
chr10:2849442-2849196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
236, 68
               

               
Conread position:
               
416-673
               

               
Cow position:
               
chr10:37173353-37173614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
79, 180
               

               
Conread position:
               
416-673
               

               
Cow position:
               
chr10:38376566-38376816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
416-677
               

               
Cow position:
               
chr10:15293359-15293106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
198, 148
               

               
Conread position:
               
416-677
               

               
Cow position:
               
chr10:51942882-51942622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
108, 73
               

               
Conread position:
               
416-677
               

               
Cow position:
               
chr10:55621761-55622014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
169, 37
               

               
Conread position:
               
417-556
               

               
Cow position:
               
chr10:48898758-48898619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
417-567
               

               
Cow position:
               
chr10:5739186-5739334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
417-634
               

               
Cow position:
               
chr10:12100451-12100674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
84, 154
               

               
Conread position:
               
417-650
               

               
Cow position:
               
chr10:30440954-30441177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
132, 0
               

               
Conread position:
               
417-656
               

               
Cow position:
               
chr10:33116859-33117098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
168, 69
               

               
Conread position:
               
417-657
               

               
Cow position:
               
chr10:48087979-48087739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
99, 19
               

               
Conread position:
               
417-673
               

               
Cow position:
               
chr10:10043014-10043256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
15, 84
               

               
Conread position:
               
417-673
               

               
Cow position:
               
chr10:50015905-50016170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
140, 186
               

               
Conread position:
               
417-676
               

               
Cow position:
               
chr10:52113581-52113837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
145, 72
               

               
Conread position:
               
417-677
               

               
Cow position:
               
chr10:48741067-48741328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
181, 123
               

               
Conread position:
               
417-677
               

               
Cow position:
               
chr10:53247912-53248180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
144, 25
               

               
Conread position:
               
417-677
               

               
Cow position:
               
chr10:56080081-56080339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
27, 37
               

               
Conread position:
               
417-677
               

               
Cow position:
               
chr10:59663880-59664144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 22
               

               
Conread position:
               
418-520
               

               
Cow position:
               
chr10:55119793-55119896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
104
               

               
Alignm identity:
               
85
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
418-531
               

               
Cow position:
               
chr10:49754861-49754976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
116
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
418-638
               

               
Cow position:
               
chr10:59843817-59844043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
418-642
               

               
Cow position:
               
chr10:58935078-58935302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
156, 56
               

               
Conread position:
               
418-649
               

               
Cow position:
               
chr10:44421814-44422042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
183, 77
               

               
Conread position:
               
418-657
               

               
Cow position:
               
chr10:9083393-9083149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
14, 31
               

               
Conread position:
               
418-665
               

               
Cow position:
               
chr10:44783438-44783187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
14, 31
               

               
Conread position:
               
418-677
               

               
Cow position:
               
chr10:24732395-24732145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
418-677
               

               
Cow position:
               
chr10:37668065-37668326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
167, 32
               

               
Conread position:
               
418-677
               

               
Cow position:
               
chr10:68829192-68829449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
7, 32
               

               
Conread position:
               
419-676
               

               
Cow position:
               
chr10:53336313-53336574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
39, 242
               

               
Conread position:
               
420-657
               

               
Cow position:
               
chr10:47651388-47651160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
136, 0
               

               
Conread position:
               
420-670
               

               
Cow position:
               
chr10:31779179-31779432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
165, 251
               

               
Conread position:
               
420-672
               

               
Cow position:
               
chr10:32584001-32583748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
142, 125
               

               
Conread position:
               
420-673
               

               
Cow position:
               
chr10:30613916-30613674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
162, 128
               

               
Conread position:
               
420-676
               

               
Cow position:
               
chr10:51861989-51862241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
165, 149
               

               
Conread position:
               
420-677
               

               
Cow position:
               
chr10:17863675-17863419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
139, 125
               

               
Conread position:
               
420-677
               

               
Cow position:
               
chr10:27828410-27828162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
235, 9
               

               
Conread position:
               
420-677
               

               
Cow position:
               
chr10:29279535-29279273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
129, 113
               

               
Conread position:
               
420-677
               

               
Cow position:
               
chr10:36002287-36002030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
167, 85
               

               
Conread position:
               
420-677
               

               
Cow position:
               
chr10:37913098-37913353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 115
               

               
Conread position:
               
420-677
               

               
Cow position:
               
chr10:54477184-54476938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
421-560
               

               
Cow position:
               
chr10:29349702-29349561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
421-672
               

               
Cow position:
               
chr10:32417441-32417190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
17, 23
               

               
Conread position:
               
421-673
               

               
Cow position:
               
chr10:16683718-16683978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
150, 124
               

               
Conread position:
               
421-677
               

               
Cow position:
               
chr10:24745208-24744962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
422-586
               

               
Cow position:
               
chr10:49060630-49060790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
422-628
               

               
Cow position:
               
chr10:63628276-63628058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
139, 0
               

               
Conread position:
               
422-672
               

               
Cow position:
               
chr10:49045926-49045675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
151, 69
               

               
Conread position:
               
422-676
               

               
Cow position:
               
chr10:55849430-55849189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
157, 20
               

               
Conread position:
               
423-638
               

               
Cow position:
               
chr10:53179365-53179157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
72, 64
               

               
Conread position:
               
423-663
               

               
Cow position:
               
chr10:66593014-66593256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
5, 24
               

               
Conread position:
               
423-676
               

               
Cow position:
               
chr10:38513261-38513007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
162, 51
               

               
Conread position:
               
423-677
               

               
Cow position:
               
chr10:8923366-8923109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 133
               

               
Conread position:
               
423-677
               

               
Cow position:
               
chr10:25699736-25699484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
185, 0
               

               
Conread position:
               
424-672
               

               
Cow position:
               
chr10:65423819-65424062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
425-595
               

               
Cow position:
               
chr10:17293347-17293521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
138, 155
               

               
Conread position:
               
425-673
               

               
Cow position:
               
chr10:53973926-53973683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
425-677
               

               
Cow position:
               
chr10:22527817-22528072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 181
               

               
Conread position:
               
425-677
               

               
Cow position:
               
chr10:23936561-23936316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
425-677
               

               
Cow position:
               
chr10:33732788-33733036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
160, 57
               

               
Conread position:
               
426-521
               

               
Cow position:
               
chr10:59159327-59159231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
97
               

               
Alignm identity:
               
83
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
426-552
               

               
Cow position:
               
chr10:38223475-38223601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
426-559
               

               
Cow position:
               
chr10:35838960-35838830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
426-627
               

               
Cow position:
               
chr10:10026433-10026239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
133, 0
               

               
Conread position:
               
426-643
               

               
Cow position:
               
chr10:45624073-45624284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
93, 68
               

               
Conread position:
               
426-651
               

               
Cow position:
               
chr10:69997717-69997945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
159, 0
               

               
Conread position:
               
426-657
               

               
Cow position:
               
chr10:25260331-25260105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
152, 36
               

               
Conread position:
               
426-673
               

               
Cow position:
               
chr10:22321606-22321358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
122, 152
               

               
Conread position:
               
426-673
               

               
Cow position:
               
chr10:28152296-28152544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
159, 16
               

               
Conread position:
               
426-677
               

               
Cow position:
               
chr10:13390964-13391218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 0
               

               
Conread position:
               
426-677
               

               
Cow position:
               
chr10:15318969-15318715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
43, 150
               

               
Conread position:
               
426-677
               

               
Cow position:
               
chr10:24763566-24763309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 54
               

               
Conread position:
               
426-677
               

               
Cow position:
               
chr10:45770127-45769874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 34
               

               
Conread position:
               
426-677
               

               
Cow position:
               
chr10:58259442-58259684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
93, 21
               

               
Conread position:
               
427-671
               

               
Cow position:
               
chr10:2202035-2202287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
427-673
               

               
Cow position:
               
chr10:48573597-48573856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
157, 175
               

               
Conread position:
               
427-677
               

               
Cow position:
               
chr10:3362709-3362454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
96, 166
               

               
Conread position:
               
428-529
               

               
Cow position:
               
chr10:25193060-25192959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
102
               

               
Alignm identity:
               
89
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
428-560
               

               
Cow position:
               
chr10:34700712-34700580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
428-657
               

               
Cow position:
               
chr10:11221784-11221555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
218, 102
               

               
Conread position:
               
428-664
               

               
Cow position:
               
chr10:20997206-20997433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
16, 21
               

               
Conread position:
               
429-671
               

               
Cow position:
               
chr10:38725735-38725493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
134, 70
               

               
Conread position:
               
429-671
               

               
Cow position:
               
chr10:55930278-55930032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
150, 135
               

               
Conread position:
               
429-677
               

               
Cow position:
               
chr10:12486343-12486095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
151, 45
               

               
Conread position:
               
429-677
               

               
Cow position:
               
chr10:41941483-41941745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
5, 156
               

               
Conread position:
               
430-677
               

               
Cow position:
               
chr10:50134724-50134975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
104, 146
               

               
Conread position:
               
431-644
               

               
Cow position:
               
chr10:533610-533394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
154, 0
               

               
Conread position:
               
432-677
               

               
Cow position:
               
chr10:40420770-40421010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
214, 52
               

               
Conread position:
               
432-677
               

               
Cow position:
               
chr10:47412029-47412273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
153, 67
               

               
Conread position:
               
439-677
               

               
Cow position:
               
chr10:5264881-5264652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
115, 60
               

               
Conread position:
               
440-677
               

               
Cow position:
               
chr10:24781258-24781019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 124
               

               
Conread position:
               
444-677
               

               
Cow position:
               
chr10:805255-805030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
445-677
               

               
Cow position:
               
chr10:24307859-24308083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
42, 120
               

               
Conread position:
               
447-561
               

               
Cow position:
               
chr10:13578276-13578162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
115
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
447-593
               

               
Cow position:
               
chr10:6252434-6252583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
138, 0
               

               
Conread position:
               
447-656
               

               
Cow position:
               
chr10:49038647-49038432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
113, 0
               

               
Conread position:
               
447-657
               

               
Cow position:
               
chr10:13617591-13617796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
92, 52
               

               
Conread position:
               
447-676
               

               
Cow position:
               
chr10:48255162-48255391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
92, 122
               

               
Conread position:
               
447-677
               

               
Cow position:
               
chr10:10964050-10963822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
138, 96
               

               
Conread position:
               
447-677
               

               
Cow position:
               
chr10:24744608-24744379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 141
               

               
Conread position:
               
447-677
               

               
Cow position:
               
chr10:54469331-54469562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 194
               

               
Conread position:
               
451-677
               

               
Cow position:
               
chr10:24548308-24548089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
118, 53
               

               
Conread position:
               
454-676
               

               
Cow position:
               
chr10:33240624-33240845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
136, 0
               

               
Conread position:
               
455-677
               

               
Cow position:
               
chr10:21462297-21462069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
102, 36
               

               
Conread position:
               
455-677
               

               
Cow position:
               
chr10:51314061-51313832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
51, 38
               

               
Conread position:
               
456-665
               

               
Cow position:
               
chr10:35767036-35767240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
198, 54
               

               
Conread position:
               
456-673
               

               
Cow position:
               
chr10:41254520-41254736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
122, 43
               

               
Conread position:
               
458-655
               

               
Cow position:
               
chr10:2899725-2899535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
458-673
               

               
Cow position:
               
chr10:4148541-4148315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
458-676
               

               
Cow position:
               
chr10:53084221-53084001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
96, 41
               

               
Conread position:
               
458-677
               

               
Cow position:
               
chr10:48513030-48513252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
103, 116
               

               
Conread position:
               
461-616
               

               
Cow position:
               
chr10:26607865-26608019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
117, 55
               

               
Conread position:
               
461-677
               

               
Cow position:
               
chr10:1428088-1427875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
20, 107
               

               
Conread position:
               
462-677
               

               
Cow position:
               
chr10:39303799-39304019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
57, 198
               

               
Conread position:
               
465-677
               

               
Cow position:
               
chr10:29070201-29069993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
121, 93
               

               
Conread position:
               
467-650
               

               
Cow position:
               
chr10:64876562-64876377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
467-650
               

               
Cow position:
               
chr10:66211248-66211433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
467-664
               

               
Cow position:
               
chr10:11576811-11576612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
180, 77
               

               
Conread position:
               
467-671
               

               
Cow position:
               
chr10:43287830-43288035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
112, 24
               

               
Conread position:
               
467-676
               

               
Cow position:
               
chr10:45679060-45678849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
77, 85
               

               
Conread position:
               
469-671
               

               
Cow position:
               
chr10:67020663-67020463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
155, 79
               

               
Conread position:
               
472-673
               

               
Cow position:
               
chr10:29816640-29816428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
472-677
               

               
Cow position:
               
chr10:22520124-22520332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
113, 0
               

               
Conread position:
               
473-656
               

               
Cow position:
               
chr10:32029796-32029980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
481-677
               

               
Cow position:
               
chr10:35857033-35857223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
490-677
               

               
Cow position:
               
chr10:35856337-35856518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
491-677
               

               
Cow position:
               
chr10:6173376-6173191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
110, 82
               

               
Conread position:
               
494-652
               

               
Cow position:
               
chr10:17584021-17584183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
496-634
               

               
Cow position:
               
chr10:59159082-59159222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
88, 78
               

               
Conread position:
               
499-677
               

               
Cow position:
               
chr10:55580263-55580432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
501-673
               

               
Cow position:
               
chr10:1417110-1416938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
74, 12
               

               
Conread position:
               
510-640
               

               
Cow position:
               
chr10:29090686-29090823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
23, 62
               

               
Conread position:
               
518-656
               

               
Cow position:
               
chr10:17602590-17602723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
67, 75
               

               
Conread position:
               
519-677
               

               
Cow position:
               
chr10:19678864-19678703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
519-677
               

               
Cow position:
               
chr10:50200702-50200542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
127, 40
               

               
Conread position:
               
520-669
               

               
Cow position:
               
chr10:48367052-48367200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
523-677
               

               
Cow position:
               
chr10:24971624-24971777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
62, 141
               

               
Conread position:
               
534-677
               

               
Cow position:
               
chr10:20447072-20446926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
37, 21
               
Show alignments to all cow chromosomes.