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Cow genome map

           
Conread name:
           
Liv1-LVRM1B030176
        

               
Conread position:
               
259-677
               

               
Cow position:
               
chr14:1803347-1802928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
128, 30
               

               
Conread position:
               
276-640
               

               
Cow position:
               
chr14:41253184-41252839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
9, 28
               

               
Conread position:
               
276-676
               

               
Cow position:
               
chr14:14466677-14466292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
34, 11
               

               
Conread position:
               
279-677
               

               
Cow position:
               
chr14:5222495-5222103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
58, 19
               

               
Conread position:
               
288-650
               

               
Cow position:
               
chr14:22941939-22941562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
109, 18
               

               
Conread position:
               
289-656
               

               
Cow position:
               
chr14:6600155-6599785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
27, 15
               

               
Conread position:
               
289-677
               

               
Cow position:
               
chr14:38378804-38379208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
45, 17
               

               
Conread position:
               
295-615
               

               
Cow position:
               
chr14:7636698-7636370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
14, 21
               

               
Conread position:
               
297-673
               

               
Cow position:
               
chr14:20640821-20640444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 11
               

               
Conread position:
               
300-560
               

               
Cow position:
               
chr14:36443205-36442949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
305-598
               

               
Cow position:
               
chr14:49487778-49488068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
34, 80
               

               
Conread position:
               
305-677
               

               
Cow position:
               
chr14:27919922-27919550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
33, 145
               

               
Conread position:
               
306-650
               

               
Cow position:
               
chr14:20016895-20016545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
34, 5
               

               
Conread position:
               
307-561
               

               
Cow position:
               
chr14:40208726-40208968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
162, 8
               

               
Conread position:
               
308-677
               

               
Cow position:
               
chr14:18345905-18345547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
293, 9
               

               
Conread position:
               
309-519
               

               
Cow position:
               
chr14:20483885-20483670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
81, 10
               

               
Conread position:
               
311-503
               

               
Cow position:
               
chr14:33758187-33758382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
27, 91
               

               
Conread position:
               
311-528
               

               
Cow position:
               
chr14:35651957-35651748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
127, 20
               

               
Conread position:
               
311-555
               

               
Cow position:
               
chr14:11576892-11577132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 0
               

               
Conread position:
               
311-575
               

               
Cow position:
               
chr14:49806997-49807251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
6, 0
               

               
Conread position:
               
311-673
               

               
Cow position:
               
chr14:13845817-13846170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 22
               

               
Conread position:
               
312-547
               

               
Cow position:
               
chr14:1431994-1431776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
312-586
               

               
Cow position:
               
chr14:41486449-41486167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
26, 191
               

               
Conread position:
               
313-514
               

               
Cow position:
               
chr14:4481498-4481694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
313-618
               

               
Cow position:
               
chr14:19193283-19193601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
25, 142
               

               
Conread position:
               
314-650
               

               
Cow position:
               
chr14:21535479-21535161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
299, 81
               

               
Conread position:
               
314-650
               

               
Cow position:
               
chr14:27338160-27338501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
26, 214
               

               
Conread position:
               
314-671
               

               
Cow position:
               
chr14:20826315-20826656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 86
               

               
Conread position:
               
314-677
               

               
Cow position:
               
chr14:19618919-19618565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
271, 51
               

               
Conread position:
               
315-501
               

               
Cow position:
               
chr14:11831974-11831778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
315-524
               

               
Cow position:
               
chr14:36559403-36559193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
23, 58
               

               
Conread position:
               
315-540
               

               
Cow position:
               
chr14:16287309-16287531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
75, 52
               

               
Conread position:
               
315-556
               

               
Cow position:
               
chr14:18301781-18302026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
315-561
               

               
Cow position:
               
chr14:4848175-4848417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 50
               

               
Conread position:
               
315-563
               

               
Cow position:
               
chr14:23078967-23078720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
101, 80
               

               
Conread position:
               
315-581
               

               
Cow position:
               
chr14:10851853-10852120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 18
               

               
Conread position:
               
316-550
               

               
Cow position:
               
chr14:27330558-27330801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
58, 77
               

               
Conread position:
               
316-564
               

               
Cow position:
               
chr14:40191425-40191658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
316-645
               

               
Cow position:
               
chr14:26222565-26222899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
78, 12
               

               
Conread position:
               
316-676
               

               
Cow position:
               
chr14:8946258-8945895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
21, 94
               

               
Conread position:
               
316-676
               

               
Cow position:
               
chr14:11043671-11043307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
7, 136
               

               
Conread position:
               
317-512
               

               
Cow position:
               
chr14:8027741-8027539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
21, 139
               

               
Conread position:
               
317-525
               

               
Cow position:
               
chr14:18412769-18412557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
317-561
               

               
Cow position:
               
chr14:7198325-7198568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
73, 16
               

               
Conread position:
               
317-580
               

               
Cow position:
               
chr14:23419622-23419884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
80, 16
               

               
Conread position:
               
317-650
               

               
Cow position:
               
chr14:27823255-27823592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
6, 51
               

               
Conread position:
               
317-651
               

               
Cow position:
               
chr14:10609508-10609845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
73, 16
               

               
Conread position:
               
317-655
               

               
Cow position:
               
chr14:50362621-50362958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
99, 12
               

               
Conread position:
               
317-657
               

               
Cow position:
               
chr14:48772744-48773071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
246, 47
               

               
Conread position:
               
317-664
               

               
Cow position:
               
chr14:33341578-33341933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
32, 16
               

               
Conread position:
               
317-665
               

               
Cow position:
               
chr14:46973268-46973613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
73, 45
               

               
Conread position:
               
317-672
               

               
Cow position:
               
chr14:12961420-12961753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
16, 78
               

               
Conread position:
               
317-676
               

               
Cow position:
               
chr14:45677059-45677409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 16
               

               
Conread position:
               
317-677
               

               
Cow position:
               
chr14:19129328-19129698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 74
               

               
Conread position:
               
317-677
               

               
Cow position:
               
chr14:48689355-48689713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
63, 102
               

               
Conread position:
               
318-500
               

               
Cow position:
               
chr14:21593175-21592994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
22, 35
               

               
Conread position:
               
318-562
               

               
Cow position:
               
chr14:36425577-36425340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
19, 81
               

               
Conread position:
               
318-578
               

               
Cow position:
               
chr14:28923989-28924255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
318-650
               

               
Cow position:
               
chr14:28378181-28378520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
13, 66
               

               
Conread position:
               
318-672
               

               
Cow position:
               
chr14:18309474-18309117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
11, 74
               

               
Conread position:
               
318-677
               

               
Cow position:
               
chr14:24236645-24237012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 286
               

               
Conread position:
               
318-677
               

               
Cow position:
               
chr14:47673051-47672698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
31, 79
               

               
Conread position:
               
319-488
               

               
Cow position:
               
chr14:2852979-2853147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
78, 103
               

               
Conread position:
               
319-489
               

               
Cow position:
               
chr14:11604714-11604880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
38, 18
               

               
Conread position:
               
319-502
               

               
Cow position:
               
chr14:24845806-24845978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
20, 60
               

               
Conread position:
               
319-514
               

               
Cow position:
               
chr14:11079283-11079475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
18, 73
               

               
Conread position:
               
319-525
               

               
Cow position:
               
chr14:18270186-18270395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
319-525
               

               
Cow position:
               
chr14:47224542-47224332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
78, 13
               

               
Conread position:
               
319-547
               

               
Cow position:
               
chr14:15470158-15469926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
19, 117
               

               
Conread position:
               
319-547
               

               
Cow position:
               
chr14:20245339-20245112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
222, 75
               

               
Conread position:
               
319-560
               

               
Cow position:
               
chr14:34775919-34775677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
71, 18
               

               
Conread position:
               
319-572
               

               
Cow position:
               
chr14:29734531-29734283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 39
               

               
Conread position:
               
319-575
               

               
Cow position:
               
chr14:16457351-16457601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
17, 39
               

               
Conread position:
               
319-618
               

               
Cow position:
               
chr14:12081297-12081010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
71, 101
               

               
Conread position:
               
319-629
               

               
Cow position:
               
chr14:1708831-1708518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
16, 133
               

               
Conread position:
               
319-629
               

               
Cow position:
               
chr14:1778020-1777707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
10, 111
               

               
Conread position:
               
319-631
               

               
Cow position:
               
chr14:44713243-44713557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
21, 241
               

               
Conread position:
               
319-633
               

               
Cow position:
               
chr14:41303016-41302690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
10, 258
               

               
Conread position:
               
319-640
               

               
Cow position:
               
chr14:11056904-11056590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
78, 30
               

               
Conread position:
               
319-656
               

               
Cow position:
               
chr14:31130550-31130214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
21, 132
               

               
Conread position:
               
319-657
               

               
Cow position:
               
chr14:27355223-27355571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
40, 81
               

               
Conread position:
               
319-671
               

               
Cow position:
               
chr14:33774196-33773873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
10, 58
               

               
Conread position:
               
319-672
               

               
Cow position:
               
chr14:13809782-13810120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
13, 72
               

               
Conread position:
               
319-672
               

               
Cow position:
               
chr14:25986343-25986699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
71, 14
               

               
Conread position:
               
319-673
               

               
Cow position:
               
chr14:2959354-2959694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
68, 13
               

               
Conread position:
               
319-673
               

               
Cow position:
               
chr14:4877398-4877048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 71
               

               
Conread position:
               
319-673
               

               
Cow position:
               
chr14:12546726-12546407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
71, 46
               

               
Conread position:
               
319-673
               

               
Cow position:
               
chr14:14949384-14949027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
111, 25
               

               
Conread position:
               
319-673
               

               
Cow position:
               
chr14:40230807-40230455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
18, 50
               

               
Conread position:
               
319-673
               

               
Cow position:
               
chr14:41809828-41809471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
15, 37
               

               
Conread position:
               
319-675
               

               
Cow position:
               
chr14:20010483-20010124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
72, 19
               

               
Conread position:
               
319-675
               

               
Cow position:
               
chr14:24921925-24922288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
21, 132
               

               
Conread position:
               
319-676
               

               
Cow position:
               
chr14:37103034-37103396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
19, 293
               

               
Conread position:
               
319-676
               

               
Cow position:
               
chr14:39037066-39037422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
20, 73
               

               
Conread position:
               
319-676
               

               
Cow position:
               
chr14:41472145-41471782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
114, 19
               

               
Conread position:
               
319-677
               

               
Cow position:
               
chr14:7290625-7290979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
14, 146
               

               
Conread position:
               
319-677
               

               
Cow position:
               
chr14:16237682-16237319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
18, 58
               

               
Conread position:
               
319-677
               

               
Cow position:
               
chr14:18941458-18941116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
10, 20
               

               
Conread position:
               
319-677
               

               
Cow position:
               
chr14:20712862-20712500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
57, 19
               

               
Conread position:
               
319-677
               

               
Cow position:
               
chr14:35420934-35420574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
13, 68
               

               
Conread position:
               
319-677
               

               
Cow position:
               
chr14:39770389-39770046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 11
               

               
Conread position:
               
319-677
               

               
Cow position:
               
chr14:48838417-48838782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 80
               

               
Conread position:
               
320-463
               

               
Cow position:
               
chr14:24757647-24757799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
320-530
               

               
Cow position:
               
chr14:41156890-41156685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
320-535
               

               
Cow position:
               
chr14:8949483-8949695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
186, 13
               

               
Conread position:
               
320-561
               

               
Cow position:
               
chr14:1715558-1715800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
70, 131
               

               
Conread position:
               
320-576
               

               
Cow position:
               
chr14:23104167-23103915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
17, 71
               

               
Conread position:
               
320-601
               

               
Cow position:
               
chr14:25225562-25225842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
245, 45
               

               
Conread position:
               
320-638
               

               
Cow position:
               
chr14:6541898-6541576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
19, 239
               

               
Conread position:
               
320-642
               

               
Cow position:
               
chr14:11470323-11469996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
14, 132
               

               
Conread position:
               
320-645
               

               
Cow position:
               
chr14:47252402-47252070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
92, 13
               

               
Conread position:
               
320-646
               

               
Cow position:
               
chr14:12244552-12244226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
192, 75
               

               
Conread position:
               
320-650
               

               
Cow position:
               
chr14:14327293-14326951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
71, 13
               

               
Conread position:
               
320-672
               

               
Cow position:
               
chr14:38747512-38747848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
328, 13
               

               
Conread position:
               
320-677
               

               
Cow position:
               
chr14:16256604-16256953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
177, 70
               

               
Conread position:
               
320-677
               

               
Cow position:
               
chr14:20667174-20666837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 13
               

               
Conread position:
               
320-677
               

               
Cow position:
               
chr14:34083317-34082967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
202, 21
               

               
Conread position:
               
320-677
               

               
Cow position:
               
chr14:39918905-39918576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
321-514
               

               
Cow position:
               
chr14:7357848-7358047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
17, 134
               

               
Conread position:
               
321-580
               

               
Cow position:
               
chr14:6360223-6360490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
17, 79
               

               
Conread position:
               
321-593
               

               
Cow position:
               
chr14:11643413-11643153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
251, 12
               

               
Conread position:
               
321-615
               

               
Cow position:
               
chr14:48745537-48745268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
321-619
               

               
Cow position:
               
chr14:47170519-47170229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
264, 73
               

               
Conread position:
               
321-640
               

               
Cow position:
               
chr14:5025106-5025432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
321-645
               

               
Cow position:
               
chr14:6655758-6655429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
69, 79
               

               
Conread position:
               
321-655
               

               
Cow position:
               
chr14:35503197-35503528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
143, 9
               

               
Conread position:
               
321-673
               

               
Cow position:
               
chr14:36254862-36254524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 73
               

               
Conread position:
               
321-677
               

               
Cow position:
               
chr14:28304957-28304602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
17, 130
               

               
Conread position:
               
321-677
               

               
Cow position:
               
chr14:28987519-28987879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
17, 193
               

               
Conread position:
               
321-677
               

               
Cow position:
               
chr14:33751368-33751709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 24
               

               
Conread position:
               
321-677
               

               
Cow position:
               
chr14:38144281-38143925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
19, 242
               

               
Conread position:
               
321-677
               

               
Cow position:
               
chr14:38168535-38168868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
241, 69
               

               
Conread position:
               
322-514
               

               
Cow position:
               
chr14:23465220-23465026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
322-677
               

               
Cow position:
               
chr14:10078086-10078454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 265
               

               
Conread position:
               
322-677
               

               
Cow position:
               
chr14:17755409-17755750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
122, 11
               

               
Conread position:
               
322-677
               

               
Cow position:
               
chr14:26442513-26442155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 10
               

               
Conread position:
               
323-497
               

               
Cow position:
               
chr14:24746290-24746473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
67, 10
               

               
Conread position:
               
324-488
               

               
Cow position:
               
chr14:19355127-19355284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
324-516
               

               
Cow position:
               
chr14:30023368-30023172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
325-676
               

               
Cow position:
               
chr14:39434420-39434074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
18, 66
               

               
Conread position:
               
326-531
               

               
Cow position:
               
chr14:41191262-41191055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
92, 64
               

               
Conread position:
               
326-561
               

               
Cow position:
               
chr14:20466771-20467000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
13, 166
               

               
Conread position:
               
326-650
               

               
Cow position:
               
chr14:26655301-26654973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
64, 246
               

               
Conread position:
               
326-677
               

               
Cow position:
               
chr14:21933509-21933154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 74
               

               
Conread position:
               
327-511
               

               
Cow position:
               
chr14:20915145-20914957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
327-657
               

               
Cow position:
               
chr14:23090544-23090214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
63, 119
               

               
Conread position:
               
327-676
               

               
Cow position:
               
chr14:3868593-3868240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
89, 6
               

               
Conread position:
               
327-677
               

               
Cow position:
               
chr14:28115353-28114999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 11
               

               
Conread position:
               
327-677
               

               
Cow position:
               
chr14:48447329-48446976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
11, 74
               

               
Conread position:
               
328-497
               

               
Cow position:
               
chr14:9030124-9030287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
328-523
               

               
Cow position:
               
chr14:27652999-27653196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
328-572
               

               
Cow position:
               
chr14:43868144-43868389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
93, 75
               

               
Conread position:
               
328-676
               

               
Cow position:
               
chr14:8786699-8786365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
318, 67
               

               
Conread position:
               
328-676
               

               
Cow position:
               
chr14:9019879-9020213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
252, 67
               

               
Conread position:
               
328-677
               

               
Cow position:
               
chr14:6736030-6735673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
55, 33
               

               
Conread position:
               
328-677
               

               
Cow position:
               
chr14:33247582-33247246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
324, 67
               

               
Conread position:
               
328-677
               

               
Cow position:
               
chr14:41749919-41749571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 63
               

               
Conread position:
               
329-494
               

               
Cow position:
               
chr14:37504351-37504518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
57, 125
               

               
Conread position:
               
329-503
               

               
Cow position:
               
chr14:39041200-39041382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
61, 17
               

               
Conread position:
               
329-524
               

               
Cow position:
               
chr14:20736453-20736644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
329-530
               

               
Cow position:
               
chr14:8707396-8707588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
329-562
               

               
Cow position:
               
chr14:15428317-15428549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
329-562
               

               
Cow position:
               
chr14:28465381-28465149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
11, 197
               

               
Conread position:
               
329-569
               

               
Cow position:
               
chr14:12033406-12033163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
61, 108
               

               
Conread position:
               
329-570
               

               
Cow position:
               
chr14:13731259-13731020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 67
               

               
Conread position:
               
329-582
               

               
Cow position:
               
chr14:8923748-8923493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
61, 42
               

               
Conread position:
               
329-582
               

               
Cow position:
               
chr14:10937509-10937769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
61, 122
               

               
Conread position:
               
329-640
               

               
Cow position:
               
chr14:7036521-7036205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
329-648
               

               
Cow position:
               
chr14:12954536-12954226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
240, 61
               

               
Conread position:
               
329-649
               

               
Cow position:
               
chr14:7799756-7800073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
87, 40
               

               
Conread position:
               
329-650
               

               
Cow position:
               
chr14:49817847-49817542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
176, 0
               

               
Conread position:
               
329-651
               

               
Cow position:
               
chr14:23424104-23424418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
329-651
               

               
Cow position:
               
chr14:23442865-23443179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
329-655
               

               
Cow position:
               
chr14:3949266-3948936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
18, 123
               

               
Conread position:
               
329-656
               

               
Cow position:
               
chr14:10858279-10858598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
115, 61
               

               
Conread position:
               
329-656
               

               
Cow position:
               
chr14:34200020-34199683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 265
               

               
Conread position:
               
329-670
               

               
Cow position:
               
chr14:49824774-49824446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
264, 35
               

               
Conread position:
               
329-672
               

               
Cow position:
               
chr14:13042598-13042938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 62
               

               
Conread position:
               
329-676
               

               
Cow position:
               
chr14:24387290-24387634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 14
               

               
Conread position:
               
329-677
               

               
Cow position:
               
chr14:2975247-2974908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
61, 71
               

               
Conread position:
               
329-677
               

               
Cow position:
               
chr14:4227386-4227016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
9, 122
               

               
Conread position:
               
329-677
               

               
Cow position:
               
chr14:10721863-10721542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
329, 61
               

               
Conread position:
               
329-677
               

               
Cow position:
               
chr14:13385203-13385557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
11, 73
               

               
Conread position:
               
329-677
               

               
Cow position:
               
chr14:15997913-15997580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 62
               

               
Conread position:
               
329-677
               

               
Cow position:
               
chr14:36289953-36289613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
11, 17
               

               
Conread position:
               
329-677
               

               
Cow position:
               
chr14:41210703-41211040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 46
               

               
Conread position:
               
329-677
               

               
Cow position:
               
chr14:42155128-42154777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 61
               

               
Conread position:
               
329-677
               

               
Cow position:
               
chr14:43046015-43046334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
336, 31
               

               
Conread position:
               
330-500
               

               
Cow position:
               
chr14:25912494-25912660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
330-503
               

               
Cow position:
               
chr14:36151164-36151337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
330-649
               

               
Cow position:
               
chr14:19852096-19851774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
60, 133
               

               
Conread position:
               
330-672
               

               
Cow position:
               
chr14:44084636-44084297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
221, 60
               

               
Conread position:
               
330-672
               

               
Cow position:
               
chr14:46685140-46685480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
8, 15
               

               
Conread position:
               
330-677
               

               
Cow position:
               
chr14:38920797-38921136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
64, 35
               

               
Conread position:
               
331-501
               

               
Cow position:
               
chr14:15228386-15228550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
331-522
               

               
Cow position:
               
chr14:21530242-21530045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
30, 172
               

               
Conread position:
               
331-673
               

               
Cow position:
               
chr14:14182192-14182528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
52, 65
               

               
Conread position:
               
331-677
               

               
Cow position:
               
chr14:8541366-8541023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
288, 64
               

               
Conread position:
               
332-562
               

               
Cow position:
               
chr14:31177438-31177217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
165, 51
               

               
Conread position:
               
332-583
               

               
Cow position:
               
chr14:41838017-41837782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
332-626
               

               
Cow position:
               
chr14:16524311-16524608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 24
               

               
Conread position:
               
332-677
               

               
Cow position:
               
chr14:3194715-3195035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
333-506
               

               
Cow position:
               
chr14:32784275-32784100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
333-514
               

               
Cow position:
               
chr14:41267880-41267709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
333-528
               

               
Cow position:
               
chr14:27364420-27364614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
69, 61
               

               
Conread position:
               
333-540
               

               
Cow position:
               
chr14:18559214-18559012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
333-542
               

               
Cow position:
               
chr14:36775506-36775700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
333-560
               

               
Cow position:
               
chr14:24712791-24712555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
333-574
               

               
Cow position:
               
chr14:11729264-11729027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 67
               

               
Conread position:
               
333-579
               

               
Cow position:
               
chr14:49940856-49941097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
94, 58
               

               
Conread position:
               
333-583
               

               
Cow position:
               
chr14:21224486-21224730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
168, 62
               

               
Conread position:
               
333-620
               

               
Cow position:
               
chr14:11285413-11285705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
34, 68
               

               
Conread position:
               
333-638
               

               
Cow position:
               
chr14:12635034-12634739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
333-671
               

               
Cow position:
               
chr14:37422930-37422604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
252, 57
               

               
Conread position:
               
333-671
               

               
Cow position:
               
chr14:48741023-48740690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
83, 27
               

               
Conread position:
               
333-672
               

               
Cow position:
               
chr14:21357400-21357733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
218, 161
               

               
Conread position:
               
333-672
               

               
Cow position:
               
chr14:33457202-33456858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
69, 62
               

               
Conread position:
               
333-676
               

               
Cow position:
               
chr14:19321667-19321320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
57, 118
               

               
Conread position:
               
333-676
               

               
Cow position:
               
chr14:23682110-23682449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
120, 77
               

               
Conread position:
               
333-676
               

               
Cow position:
               
chr14:36166783-36167124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
57, 129
               

               
Conread position:
               
333-677
               

               
Cow position:
               
chr14:14622325-14621987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
111, 57
               

               
Conread position:
               
333-677
               

               
Cow position:
               
chr14:20110879-20110536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 63
               

               
Conread position:
               
333-677
               

               
Cow position:
               
chr14:22988878-22989219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
226, 62
               

               
Conread position:
               
333-677
               

               
Cow position:
               
chr14:32452094-32452440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
230, 60
               

               
Conread position:
               
333-677
               

               
Cow position:
               
chr14:33791036-33791373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
322, 58
               

               
Conread position:
               
333-677
               

               
Cow position:
               
chr14:42330189-42330538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
64, 248
               

               
Conread position:
               
333-677
               

               
Cow position:
               
chr14:45052281-45052630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
57, 120
               

               
Conread position:
               
334-514
               

               
Cow position:
               
chr14:5668277-5668095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
334-575
               

               
Cow position:
               
chr14:27733452-27733689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
214, 61
               

               
Conread position:
               
334-650
               

               
Cow position:
               
chr14:40754400-40754085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
102, 61
               

               
Conread position:
               
334-677
               

               
Cow position:
               
chr14:42596238-42596567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
300, 30
               

               
Conread position:
               
335-615
               

               
Cow position:
               
chr14:4282665-4282383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
55, 34
               

               
Conread position:
               
335-638
               

               
Cow position:
               
chr14:42419434-42419127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
55, 29
               

               
Conread position:
               
335-676
               

               
Cow position:
               
chr14:30606072-30605733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
70, 29
               

               
Conread position:
               
336-611
               

               
Cow position:
               
chr14:10693411-10693138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
80, 114
               

               
Conread position:
               
336-671
               

               
Cow position:
               
chr14:24981299-24981638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
29, 165
               

               
Conread position:
               
337-522
               

               
Cow position:
               
chr14:20070909-20071102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
337-530
               

               
Cow position:
               
chr14:24785506-24785697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
337-568
               

               
Cow position:
               
chr14:25903379-25903608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
337-572
               

               
Cow position:
               
chr14:38286138-38285886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
53, 215
               

               
Conread position:
               
337-579
               

               
Cow position:
               
chr14:20482005-20481754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
53, 158
               

               
Conread position:
               
337-637
               

               
Cow position:
               
chr14:24945647-24945344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 27
               

               
Conread position:
               
337-672
               

               
Cow position:
               
chr14:33714827-33714501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 58
               

               
Conread position:
               
337-673
               

               
Cow position:
               
chr14:15492438-15492779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 27
               

               
Conread position:
               
337-677
               

               
Cow position:
               
chr14:5630015-5630348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
337-677
               

               
Cow position:
               
chr14:16550147-16549817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
248, 27
               

               
Conread position:
               
337-677
               

               
Cow position:
               
chr14:41966072-41966427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
55, 253
               

               
Conread position:
               
338-547
               

               
Cow position:
               
chr14:9307914-9308121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
59, 26
               

               
Conread position:
               
338-677
               

               
Cow position:
               
chr14:23080906-23080578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 58
               

               
Conread position:
               
338-677
               

               
Cow position:
               
chr14:48426920-48427260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 57
               

               
Conread position:
               
339-583
               

               
Cow position:
               
chr14:25227996-25228228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
82, 46
               

               
Conread position:
               
339-648
               

               
Cow position:
               
chr14:30756690-30757000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
48, 111
               

               
Conread position:
               
339-677
               

               
Cow position:
               
chr14:19594286-19593949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
209, 55
               

               
Conread position:
               
339-677
               

               
Cow position:
               
chr14:25001881-25002221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
71, 237
               

               
Conread position:
               
340-518
               

               
Cow position:
               
chr14:2759283-2759109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
341-671
               

               
Cow position:
               
chr14:7959649-7959952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
201, 49
               

               
Conread position:
               
345-503
               

               
Cow position:
               
chr14:20035573-20035734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
45, 106
               

               
Conread position:
               
345-504
               

               
Cow position:
               
chr14:20513082-20513243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
45, 106
               

               
Conread position:
               
345-510
               

               
Cow position:
               
chr14:11280258-11280094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
83, 50
               

               
Conread position:
               
345-672
               

               
Cow position:
               
chr14:26433394-26433062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 98
               

               
Conread position:
               
345-676
               

               
Cow position:
               
chr14:16760254-16760582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 65
               

               
Conread position:
               
345-677
               

               
Cow position:
               
chr14:12520449-12520121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
45, 55
               

               
Conread position:
               
348-512
               

               
Cow position:
               
chr14:44751168-44751006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
349-677
               

               
Cow position:
               
chr14:1646325-1646005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 20
               

               
Conread position:
               
352-673
               

               
Cow position:
               
chr14:8101659-8101972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
228, 45
               

               
Conread position:
               
363-677
               

               
Cow position:
               
chr14:41127779-41128080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
27, 76
               

               
Conread position:
               
367-577
               

               
Cow position:
               
chr14:5355149-5354940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
61, 114
               

               
Conread position:
               
370-673
               

               
Cow position:
               
chr14:1868507-1868200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
29, 187
               

               
Conread position:
               
382-676
               

               
Cow position:
               
chr14:28003858-28004163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
47, 150
               

               
Conread position:
               
383-677
               

               
Cow position:
               
chr14:38338241-38337960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
385-573
               

               
Cow position:
               
chr14:45577198-45577009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
179, 0
               

               
Conread position:
               
388-563
               

               
Cow position:
               
chr14:26148818-26148643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
61, 87
               

               
Conread position:
               
388-564
               

               
Cow position:
               
chr14:22997679-22997506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
388-576
               

               
Cow position:
               
chr14:11975835-11975651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
125, 0
               

               
Conread position:
               
388-671
               

               
Cow position:
               
chr14:34983764-34984044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
95, 157
               

               
Conread position:
               
388-672
               

               
Cow position:
               
chr14:37884019-37883733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
172, 188
               

               
Conread position:
               
388-675
               

               
Cow position:
               
chr14:10631223-10630940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
43, 165
               

               
Conread position:
               
388-677
               

               
Cow position:
               
chr14:21964034-21964308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
258, 129
               

               
Conread position:
               
388-677
               

               
Cow position:
               
chr14:25778998-25779278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
31, 139
               

               
Conread position:
               
390-522
               

               
Cow position:
               
chr14:16761709-16761579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
390-651
               

               
Cow position:
               
chr14:38527327-38527584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
192, 38
               

               
Conread position:
               
391-675
               

               
Cow position:
               
chr14:27076875-27077170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
28, 232
               

               
Conread position:
               
393-517
               

               
Cow position:
               
chr14:23719424-23719297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
26, 47
               

               
Conread position:
               
393-650
               

               
Cow position:
               
chr14:42436927-42437184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
192, 122
               

               
Conread position:
               
393-673
               

               
Cow position:
               
chr14:22583053-22583324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
26, 42
               

               
Conread position:
               
401-547
               

               
Cow position:
               
chr14:2981760-2981615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
20, 32
               

               
Conread position:
               
401-666
               

               
Cow position:
               
chr14:25681837-25682108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
185, 162
               

               
Conread position:
               
403-546
               

               
Cow position:
               
chr14:30431656-30431513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
408-618
               

               
Cow position:
               
chr14:12127491-12127284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
168, 12
               

               
Conread position:
               
408-673
               

               
Cow position:
               
chr14:24416798-24417067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
84, 24
               

               
Conread position:
               
410-500
               

               
Cow position:
               
chr14:21538518-21538427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
92
               

               
Alignm identity:
               
81
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
411-525
               

               
Cow position:
               
chr14:28706965-28707081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
117
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
411-528
               

               
Cow position:
               
chr14:26456293-26456410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
32, 38
               

               
Conread position:
               
411-528
               

               
Cow position:
               
chr14:42276546-42276660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
118
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
411-530
               

               
Cow position:
               
chr14:23663483-23663369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
411-573
               

               
Cow position:
               
chr14:24913794-24913959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
411-574
               

               
Cow position:
               
chr14:12924220-12924384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
108, 15
               

               
Conread position:
               
411-578
               

               
Cow position:
               
chr14:42339092-42339251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
411-582
               

               
Cow position:
               
chr14:5557200-5557030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
167, 9
               

               
Conread position:
               
411-620
               

               
Cow position:
               
chr14:34331406-34331197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
190, 159
               

               
Conread position:
               
411-649
               

               
Cow position:
               
chr14:19951486-19951728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
411-650
               

               
Cow position:
               
chr14:26097773-26097536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
202, 153
               

               
Conread position:
               
411-651
               

               
Cow position:
               
chr14:14316807-14317042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
411-661
               

               
Cow position:
               
chr14:20600305-20600557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
60, 156
               

               
Conread position:
               
411-669
               

               
Cow position:
               
chr14:12035331-12035587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
174, 14
               

               
Conread position:
               
411-671
               

               
Cow position:
               
chr14:9837972-9837713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
160, 18
               

               
Conread position:
               
411-672
               

               
Cow position:
               
chr14:1859692-1859432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
87, 36
               

               
Conread position:
               
411-672
               

               
Cow position:
               
chr14:6175517-6175765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
174, 65
               

               
Conread position:
               
411-677
               

               
Cow position:
               
chr14:15055071-15054802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
174, 249
               

               
Conread position:
               
411-677
               

               
Cow position:
               
chr14:16032932-16033195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
147, 86
               

               
Conread position:
               
411-677
               

               
Cow position:
               
chr14:33830222-33830484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
235, 85
               

               
Conread position:
               
411-677
               

               
Cow position:
               
chr14:37131582-37131842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
174, 44
               

               
Conread position:
               
412-671
               

               
Cow position:
               
chr14:4203177-4202912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
151, 0
               

               
Conread position:
               
412-677
               

               
Cow position:
               
chr14:27848106-27848385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 212
               

               
Conread position:
               
414-570
               

               
Cow position:
               
chr14:34096642-34096488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
58, 78
               

               
Conread position:
               
414-583
               

               
Cow position:
               
chr14:3779258-3779428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
66, 15
               

               
Conread position:
               
414-640
               

               
Cow position:
               
chr14:19359810-19360044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
14, 148
               

               
Conread position:
               
414-673
               

               
Cow position:
               
chr14:27592033-27591771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
172, 65
               

               
Conread position:
               
414-673
               

               
Cow position:
               
chr14:29632957-29632703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
135, 13
               

               
Conread position:
               
415-562
               

               
Cow position:
               
chr14:2571099-2570954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
415-562
               

               
Cow position:
               
chr14:34399874-34399727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
415-562
               

               
Cow position:
               
chr14:34449047-34448900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
415-676
               

               
Cow position:
               
chr14:14417572-14417311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
15, 34
               

               
Conread position:
               
416-546
               

               
Cow position:
               
chr14:18350932-18350802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
416-558
               

               
Cow position:
               
chr14:3943625-3943483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
416-563
               

               
Cow position:
               
chr14:11031356-11031209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
416-563
               

               
Cow position:
               
chr14:20349807-20349657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
36, 73
               

               
Conread position:
               
416-650
               

               
Cow position:
               
chr14:19863509-19863277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
29, 210
               

               
Conread position:
               
416-650
               

               
Cow position:
               
chr14:27275088-27275321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
181, 77
               

               
Conread position:
               
416-656
               

               
Cow position:
               
chr14:46997964-46998212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
145, 0
               

               
Conread position:
               
416-672
               

               
Cow position:
               
chr14:19188968-19189218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 126
               

               
Conread position:
               
416-673
               

               
Cow position:
               
chr14:4990927-4991181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
152, 143
               

               
Conread position:
               
416-676
               

               
Cow position:
               
chr14:44257849-44258110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
162, 12
               

               
Conread position:
               
416-677
               

               
Cow position:
               
chr14:19372264-19372528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
166, 244
               

               
Conread position:
               
417-640
               

               
Cow position:
               
chr14:7695192-7695411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
47, 85
               

               
Conread position:
               
417-671
               

               
Cow position:
               
chr14:14187257-14187516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
20, 87
               

               
Conread position:
               
418-527
               

               
Cow position:
               
chr14:40018216-40018320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
110
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
420-555
               

               
Cow position:
               
chr14:19487224-19487359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
420-671
               

               
Cow position:
               
chr14:21691346-21691092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
22, 29
               

               
Conread position:
               
420-672
               

               
Cow position:
               
chr14:37447534-37447287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
226, 85
               

               
Conread position:
               
420-676
               

               
Cow position:
               
chr14:38355117-38355371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
141, 105
               

               
Conread position:
               
420-677
               

               
Cow position:
               
chr14:16834251-16834522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
151, 251
               

               
Conread position:
               
420-677
               

               
Cow position:
               
chr14:17841362-17841102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
160, 36
               

               
Conread position:
               
420-677
               

               
Cow position:
               
chr14:24796505-24796240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 154
               

               
Conread position:
               
420-677
               

               
Cow position:
               
chr14:26490815-26490556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
52, 246
               

               
Conread position:
               
420-677
               

               
Cow position:
               
chr14:45605027-45605278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
160, 52
               

               
Conread position:
               
421-541
               

               
Cow position:
               
chr14:40287522-40287642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
421-559
               

               
Cow position:
               
chr14:25824626-25824763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
421-664
               

               
Cow position:
               
chr14:48961512-48961754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
165, 81
               

               
Conread position:
               
421-665
               

               
Cow position:
               
chr14:49021968-49021726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
231, 63
               

               
Conread position:
               
421-671
               

               
Cow position:
               
chr14:9308160-9308405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
164, 99
               

               
Conread position:
               
421-673
               

               
Cow position:
               
chr14:40432855-40433103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
11, 49
               

               
Conread position:
               
421-677
               

               
Cow position:
               
chr14:19394293-19394547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
167, 56
               

               
Conread position:
               
421-677
               

               
Cow position:
               
chr14:33309573-33309324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
164, 134
               

               
Conread position:
               
421-677
               

               
Cow position:
               
chr14:36555216-36554968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
224, 43
               

               
Conread position:
               
422-650
               

               
Cow position:
               
chr14:49086238-49086466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
15, 27
               

               
Conread position:
               
422-676
               

               
Cow position:
               
chr14:35018822-35018569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
156, 147
               

               
Conread position:
               
423-638
               

               
Cow position:
               
chr14:1978141-1977923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
43, 139
               

               
Conread position:
               
423-673
               

               
Cow position:
               
chr14:48412950-48412697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
157, 143
               

               
Conread position:
               
423-677
               

               
Cow position:
               
chr14:39778684-39778937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 201
               

               
Conread position:
               
425-640
               

               
Cow position:
               
chr14:29698427-29698208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
61, 128
               

               
Conread position:
               
425-654
               

               
Cow position:
               
chr14:33300638-33300869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
160, 74
               

               
Conread position:
               
426-570
               

               
Cow position:
               
chr14:2833470-2833326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
426-677
               

               
Cow position:
               
chr14:8750012-8750262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
137, 54
               

               
Conread position:
               
427-639
               

               
Cow position:
               
chr14:2038872-2038666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
154, 0
               

               
Conread position:
               
427-670
               

               
Cow position:
               
chr14:23712618-23712867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
88, 14
               

               
Conread position:
               
427-677
               

               
Cow position:
               
chr14:20385049-20384796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
130, 244
               

               
Conread position:
               
427-677
               

               
Cow position:
               
chr14:30661934-30662174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
89, 33
               

               
Conread position:
               
427-677
               

               
Cow position:
               
chr14:36709060-36709307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
164, 79
               

               
Conread position:
               
428-540
               

               
Cow position:
               
chr14:15491093-15491205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
113
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
428-676
               

               
Cow position:
               
chr14:18904669-18904425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
16, 21
               

               
Conread position:
               
428-677
               

               
Cow position:
               
chr14:5835849-5836088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
428-677
               

               
Cow position:
               
chr14:8784138-8784369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
429-535
               

               
Cow position:
               
chr14:5224836-5224731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
107
               

               
Alignm identity:
               
88
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
429-672
               

               
Cow position:
               
chr14:25403997-25403759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
143, 0
               

               
Conread position:
               
429-673
               

               
Cow position:
               
chr14:24607905-24608149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
158, 73
               

               
Conread position:
               
431-677
               

               
Cow position:
               
chr14:27791483-27791714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
19, 130
               

               
Conread position:
               
432-677
               

               
Cow position:
               
chr14:5572883-5573129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
9, 176
               

               
Conread position:
               
434-677
               

               
Cow position:
               
chr14:41180771-41180511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
56, 28
               

               
Conread position:
               
439-639
               

               
Cow position:
               
chr14:5633997-5633789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
47, 135
               

               
Conread position:
               
439-676
               

               
Cow position:
               
chr14:25378546-25378308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
136, 8
               

               
Conread position:
               
441-583
               

               
Cow position:
               
chr14:42480267-42480129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
120, 72
               

               
Conread position:
               
451-677
               

               
Cow position:
               
chr14:33338515-33338293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
128, 54
               

               
Conread position:
               
453-673
               

               
Cow position:
               
chr14:41325485-41325257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
132, 214
               

               
Conread position:
               
455-600
               

               
Cow position:
               
chr14:2345031-2345179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
129, 0
               

               
Conread position:
               
455-638
               

               
Cow position:
               
chr14:3564248-3564429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
112, 0
               

               
Conread position:
               
455-656
               

               
Cow position:
               
chr14:49929780-49929572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
124, 0
               

               
Conread position:
               
455-673
               

               
Cow position:
               
chr14:37884446-37884230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
137, 100
               

               
Conread position:
               
456-677
               

               
Cow position:
               
chr14:3162692-3162897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
458-673
               

               
Cow position:
               
chr14:22966722-22966936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
190, 106
               

               
Conread position:
               
458-677
               

               
Cow position:
               
chr14:12667696-12667919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
127, 100
               

               
Conread position:
               
461-677
               

               
Cow position:
               
chr14:29029799-29030018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
123, 32
               

               
Conread position:
               
462-672
               

               
Cow position:
               
chr14:33643806-33643600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
22, 44
               

               
Conread position:
               
464-650
               

               
Cow position:
               
chr14:32553333-32553150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
121, 52
               

               
Conread position:
               
465-673
               

               
Cow position:
               
chr14:47591939-47591735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
120, 12
               

               
Conread position:
               
467-677
               

               
Cow position:
               
chr14:43249564-43249769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
180, 92
               

               
Conread position:
               
470-677
               

               
Cow position:
               
chr14:41479683-41479475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
114, 90
               

               
Conread position:
               
473-657
               

               
Cow position:
               
chr14:17830894-17831078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
89, 120
               

               
Conread position:
               
486-677
               

               
Cow position:
               
chr14:33326400-33326205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
111, 0
               

               
Conread position:
               
492-677
               

               
Cow position:
               
chr14:33828163-33828348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
160, 74
               

               
Conread position:
               
496-677
               

               
Cow position:
               
chr14:33462171-33462345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
510-671
               

               
Cow position:
               
chr14:11820101-11819942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
520-673
               

               
Cow position:
               
chr14:24580957-24581107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
135, 66
               
Show alignments to all cow chromosomes.