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Cow genome map

           
Conread name:
           
Liv1-LVRM1B030176
        

               
Conread position:
               
216-567
               

               
Cow position:
               
chr16:9597133-9597484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
223-676
               

               
Cow position:
               
chr16:15370991-15370535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
30, 70
               

               
Conread position:
               
259-677
               

               
Cow position:
               
chr16:20025720-20025302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 11
               

               
Conread position:
               
273-561
               

               
Cow position:
               
chr16:51610564-51610861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
34, 18
               

               
Conread position:
               
280-570
               

               
Cow position:
               
chr16:51795357-51795639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
35, 17
               

               
Conread position:
               
282-677
               

               
Cow position:
               
chr16:17143188-17142791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
137, 10
               

               
Conread position:
               
284-497
               

               
Cow position:
               
chr16:12111719-12111929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
22, 46
               

               
Conread position:
               
288-611
               

               
Cow position:
               
chr16:30305577-30305893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 21
               

               
Conread position:
               
288-677
               

               
Cow position:
               
chr16:42092133-42092528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 17
               

               
Conread position:
               
289-655
               

               
Cow position:
               
chr16:53428498-53428134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
23, 17
               

               
Conread position:
               
293-523
               

               
Cow position:
               
chr16:33290629-33290395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
297-677
               

               
Cow position:
               
chr16:16597792-16597421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 33
               

               
Conread position:
               
299-561
               

               
Cow position:
               
chr16:11390042-11390313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
91, 16
               

               
Conread position:
               
299-613
               

               
Cow position:
               
chr16:8530664-8530957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
39, 10
               

               
Conread position:
               
299-673
               

               
Cow position:
               
chr16:29159342-29158989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
145, 14
               

               
Conread position:
               
305-489
               

               
Cow position:
               
chr16:47274492-47274682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
17, 99
               

               
Conread position:
               
305-525
               

               
Cow position:
               
chr16:24674441-24674669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
306-673
               

               
Cow position:
               
chr16:13306646-13307004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
306-673
               

               
Cow position:
               
chr16:38243434-38243803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 32
               

               
Conread position:
               
306-677
               

               
Cow position:
               
chr16:20205685-20205311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
84, 27
               

               
Conread position:
               
308-522
               

               
Cow position:
               
chr16:20743089-20743302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
30, 64
               

               
Conread position:
               
308-655
               

               
Cow position:
               
chr16:8493765-8494120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
82, 25
               

               
Conread position:
               
309-506
               

               
Cow position:
               
chr16:15251836-15252024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
310-528
               

               
Cow position:
               
chr16:22776194-22776416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
310-677
               

               
Cow position:
               
chr16:13689883-13689520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
263, 8
               

               
Conread position:
               
311-488
               

               
Cow position:
               
chr16:51393164-51393345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
5, 125
               

               
Conread position:
               
311-645
               

               
Cow position:
               
chr16:38244396-38244723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
79, 135
               

               
Conread position:
               
311-677
               

               
Cow position:
               
chr16:14242592-14242227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 86
               

               
Conread position:
               
311-677
               

               
Cow position:
               
chr16:56232035-56231682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 80
               

               
Conread position:
               
312-583
               

               
Cow position:
               
chr16:34291081-34291340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
251, 21
               

               
Conread position:
               
312-671
               

               
Cow position:
               
chr16:32301779-32302131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
11, 257
               

               
Conread position:
               
313-598
               

               
Cow position:
               
chr16:20824695-20824418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 15
               

               
Conread position:
               
313-677
               

               
Cow position:
               
chr16:50289377-50289004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 138
               

               
Conread position:
               
314-500
               

               
Cow position:
               
chr16:3938796-3938977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
314-504
               

               
Cow position:
               
chr16:17617142-17617333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
74, 29
               

               
Conread position:
               
314-504
               

               
Cow position:
               
chr16:56285477-56285657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
53, 17
               

               
Conread position:
               
314-533
               

               
Cow position:
               
chr16:8809878-8810092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
314-655
               

               
Cow position:
               
chr16:40446488-40446129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 142
               

               
Conread position:
               
314-667
               

               
Cow position:
               
chr16:44210340-44210700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
23, 39
               

               
Conread position:
               
314-672
               

               
Cow position:
               
chr16:24128926-24128565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
75, 131
               

               
Conread position:
               
314-677
               

               
Cow position:
               
chr16:45678197-45677842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 51
               

               
Conread position:
               
315-550
               

               
Cow position:
               
chr16:9596589-9596354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
24, 84
               

               
Conread position:
               
315-677
               

               
Cow position:
               
chr16:17746060-17745690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
75, 18
               

               
Conread position:
               
315-677
               

               
Cow position:
               
chr16:17945760-17945377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 347
               

               
Conread position:
               
315-677
               

               
Cow position:
               
chr16:20476758-20476391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
23, 87
               

               
Conread position:
               
315-677
               

               
Cow position:
               
chr16:26649418-26649774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
270, 18
               

               
Conread position:
               
315-677
               

               
Cow position:
               
chr16:33198215-33198579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 49
               

               
Conread position:
               
316-562
               

               
Cow position:
               
chr16:47180950-47181193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
93, 15
               

               
Conread position:
               
316-567
               

               
Cow position:
               
chr16:29636028-29636263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
316-657
               

               
Cow position:
               
chr16:13698732-13698387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
74, 14
               

               
Conread position:
               
316-671
               

               
Cow position:
               
chr16:54709836-54710172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
245, 74
               

               
Conread position:
               
316-677
               

               
Cow position:
               
chr16:8065670-8066030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 17
               

               
Conread position:
               
317-475
               

               
Cow position:
               
chr16:23034045-23033886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
317-506
               

               
Cow position:
               
chr16:7727824-7728007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
73, 133
               

               
Conread position:
               
317-511
               

               
Cow position:
               
chr16:6026785-6026975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
73, 16
               

               
Conread position:
               
317-548
               

               
Cow position:
               
chr16:18572837-18573068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
23, 101
               

               
Conread position:
               
317-548
               

               
Cow position:
               
chr16:24142738-24142972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
73, 12
               

               
Conread position:
               
317-562
               

               
Cow position:
               
chr16:6609292-6609532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
21, 83
               

               
Conread position:
               
317-618
               

               
Cow position:
               
chr16:33135143-33134856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
268, 69
               

               
Conread position:
               
317-634
               

               
Cow position:
               
chr16:39473942-39474247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
268, 41
               

               
Conread position:
               
317-650
               

               
Cow position:
               
chr16:22207271-22206958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
237, 19
               

               
Conread position:
               
317-650
               

               
Cow position:
               
chr16:22984969-22984640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
17, 77
               

               
Conread position:
               
317-655
               

               
Cow position:
               
chr16:9905309-9904970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 13
               

               
Conread position:
               
317-665
               

               
Cow position:
               
chr16:7583612-7583263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 16
               

               
Conread position:
               
317-666
               

               
Cow position:
               
chr16:47519048-47518704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 73
               

               
Conread position:
               
317-671
               

               
Cow position:
               
chr16:31078888-31079236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
273, 15
               

               
Conread position:
               
317-673
               

               
Cow position:
               
chr16:8322780-8323123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
246, 35
               

               
Conread position:
               
317-677
               

               
Cow position:
               
chr16:11422531-11422166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 211
               

               
Conread position:
               
317-677
               

               
Cow position:
               
chr16:45813484-45813846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
267, 14
               

               
Conread position:
               
318-530
               

               
Cow position:
               
chr16:41806909-41807098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
318-531
               

               
Cow position:
               
chr16:40029674-40029881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
98, 13
               

               
Conread position:
               
318-618
               

               
Cow position:
               
chr16:17134844-17135145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 94
               

               
Conread position:
               
318-676
               

               
Cow position:
               
chr16:14106857-14106502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 18
               

               
Conread position:
               
318-677
               

               
Cow position:
               
chr16:48095555-48095906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 19
               

               
Conread position:
               
318-677
               

               
Cow position:
               
chr16:48145194-48145552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
63, 15
               

               
Conread position:
               
319-458
               

               
Cow position:
               
chr16:12101460-12101325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
319-486
               

               
Cow position:
               
chr16:8795494-8795671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
319-500
               

               
Cow position:
               
chr16:11775785-11775960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
71, 14
               

               
Conread position:
               
319-513
               

               
Cow position:
               
chr16:3048938-3049133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
71, 81
               

               
Conread position:
               
319-513
               

               
Cow position:
               
chr16:4277338-4277533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
71, 81
               

               
Conread position:
               
319-513
               

               
Cow position:
               
chr16:9097241-9097044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
319-522
               

               
Cow position:
               
chr16:8288735-8288935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
8, 77
               

               
Conread position:
               
319-525
               

               
Cow position:
               
chr16:43758431-43758637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
10, 46
               

               
Conread position:
               
319-530
               

               
Cow position:
               
chr16:19478554-19478761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
109, 45
               

               
Conread position:
               
319-536
               

               
Cow position:
               
chr16:30211661-30211452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
319-536
               

               
Cow position:
               
chr16:45193595-45193811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
85, 14
               

               
Conread position:
               
319-537
               

               
Cow position:
               
chr16:7928169-7928388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
71, 14
               

               
Conread position:
               
319-542
               

               
Cow position:
               
chr16:12220901-12220673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
319-542
               

               
Cow position:
               
chr16:56627145-56626929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
319-544
               

               
Cow position:
               
chr16:24202645-24202875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
21, 190
               

               
Conread position:
               
319-556
               

               
Cow position:
               
chr16:29026426-29026186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
41, 14
               

               
Conread position:
               
319-559
               

               
Cow position:
               
chr16:48544214-48543970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
16, 132
               

               
Conread position:
               
319-560
               

               
Cow position:
               
chr16:16232275-16232027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
319-561
               

               
Cow position:
               
chr16:27728463-27728232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
220, 39
               

               
Conread position:
               
319-562
               

               
Cow position:
               
chr16:9560269-9560523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
319-562
               

               
Cow position:
               
chr16:11584193-11584432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
193, 76
               

               
Conread position:
               
319-562
               

               
Cow position:
               
chr16:31149589-31149350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
319-615
               

               
Cow position:
               
chr16:44429093-44428797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
21, 48
               

               
Conread position:
               
319-628
               

               
Cow position:
               
chr16:47835133-47834834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
71, 81
               

               
Conread position:
               
319-630
               

               
Cow position:
               
chr16:4971100-4970786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
81, 107
               

               
Conread position:
               
319-641
               

               
Cow position:
               
chr16:19052846-19052527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
301, 24
               

               
Conread position:
               
319-648
               

               
Cow position:
               
chr16:47852384-47852708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
268, 71
               

               
Conread position:
               
319-649
               

               
Cow position:
               
chr16:54226403-54226715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 11
               

               
Conread position:
               
319-650
               

               
Cow position:
               
chr16:10032856-10032522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
13, 42
               

               
Conread position:
               
319-650
               

               
Cow position:
               
chr16:10148484-10148163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
14, 74
               

               
Conread position:
               
319-650
               

               
Cow position:
               
chr16:47245806-47245470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
11, 164
               

               
Conread position:
               
319-650
               

               
Cow position:
               
chr16:50409463-50409112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
19, 85
               

               
Conread position:
               
319-651
               

               
Cow position:
               
chr16:53813435-53813772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
76, 213
               

               
Conread position:
               
319-653
               

               
Cow position:
               
chr16:56082151-56082483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 11
               

               
Conread position:
               
319-657
               

               
Cow position:
               
chr16:956671-957021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
68, 131
               

               
Conread position:
               
319-669
               

               
Cow position:
               
chr16:13990178-13989845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
266, 13
               

               
Conread position:
               
319-672
               

               
Cow position:
               
chr16:8738285-8737926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 85
               

               
Conread position:
               
319-673
               

               
Cow position:
               
chr16:10592648-10592294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 34
               

               
Conread position:
               
319-673
               

               
Cow position:
               
chr16:19644100-19643748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
184, 71
               

               
Conread position:
               
319-673
               

               
Cow position:
               
chr16:55683512-55683155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
70, 47
               

               
Conread position:
               
319-675
               

               
Cow position:
               
chr16:54664592-54664942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
37, 14
               

               
Conread position:
               
319-676
               

               
Cow position:
               
chr16:16552782-16552418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
21, 259
               

               
Conread position:
               
319-676
               

               
Cow position:
               
chr16:37117292-37116927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
21, 131
               

               
Conread position:
               
319-677
               

               
Cow position:
               
chr16:7418586-7418239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
266, 14
               

               
Conread position:
               
319-677
               

               
Cow position:
               
chr16:9973268-9973643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 246
               

               
Conread position:
               
319-677
               

               
Cow position:
               
chr16:19003299-19003661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 248
               

               
Conread position:
               
319-677
               

               
Cow position:
               
chr16:32587422-32587054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
75, 338
               

               
Conread position:
               
319-677
               

               
Cow position:
               
chr16:33705016-33704662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 72
               

               
Conread position:
               
319-677
               

               
Cow position:
               
chr16:35343254-35343617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
14, 111
               

               
Conread position:
               
319-677
               

               
Cow position:
               
chr16:38905011-38905374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
83, 14
               

               
Conread position:
               
319-677
               

               
Cow position:
               
chr16:45139877-45139527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
266, 33
               

               
Conread position:
               
319-677
               

               
Cow position:
               
chr16:52834687-52835028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
339, 71
               

               
Conread position:
               
319-677
               

               
Cow position:
               
chr16:54579379-54579025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
283, 76
               

               
Conread position:
               
320-488
               

               
Cow position:
               
chr16:21974746-21974918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
48, 13
               

               
Conread position:
               
320-514
               

               
Cow position:
               
chr16:56670697-56670899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
320-515
               

               
Cow position:
               
chr16:9986843-9987049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
320-556
               

               
Cow position:
               
chr16:9830658-9830423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
82, 13
               

               
Conread position:
               
320-568
               

               
Cow position:
               
chr16:21369977-21370221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
77, 45
               

               
Conread position:
               
320-604
               

               
Cow position:
               
chr16:11134774-11135054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
265, 11
               

               
Conread position:
               
320-628
               

               
Cow position:
               
chr16:30036448-30036139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
53, 160
               

               
Conread position:
               
320-635
               

               
Cow position:
               
chr16:11660257-11660549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
320-638
               

               
Cow position:
               
chr16:37401451-37401145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
168, 17
               

               
Conread position:
               
320-653
               

               
Cow position:
               
chr16:8461871-8462200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
102, 13
               

               
Conread position:
               
320-661
               

               
Cow position:
               
chr16:56787557-56787907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
12, 153
               

               
Conread position:
               
320-663
               

               
Cow position:
               
chr16:11083208-11082878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
320-671
               

               
Cow position:
               
chr16:8448445-8448783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
20, 61
               

               
Conread position:
               
320-673
               

               
Cow position:
               
chr16:238477-238125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
260, 16
               

               
Conread position:
               
320-677
               

               
Cow position:
               
chr16:23822814-23823164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
20, 58
               

               
Conread position:
               
321-500
               

               
Cow position:
               
chr16:16543064-16542883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
321-522
               

               
Cow position:
               
chr16:28199239-28199041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
60, 17
               

               
Conread position:
               
321-537
               

               
Cow position:
               
chr16:19053679-19053886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
321-580
               

               
Cow position:
               
chr16:56243672-56243930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
40, 78
               

               
Conread position:
               
321-650
               

               
Cow position:
               
chr16:4851903-4852233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
69, 114
               

               
Conread position:
               
321-650
               

               
Cow position:
               
chr16:53508782-53509100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
321-650
               

               
Cow position:
               
chr16:56796445-56796783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
67, 12
               

               
Conread position:
               
321-651
               

               
Cow position:
               
chr16:34753746-34754079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 21
               

               
Conread position:
               
321-673
               

               
Cow position:
               
chr16:38663494-38663849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
17, 169
               

               
Conread position:
               
321-676
               

               
Cow position:
               
chr16:13611227-13611595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 22
               

               
Conread position:
               
321-677
               

               
Cow position:
               
chr16:49125979-49126330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 12
               

               
Conread position:
               
321-677
               

               
Cow position:
               
chr16:51578237-51578561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
241, 67
               

               
Conread position:
               
322-517
               

               
Cow position:
               
chr16:25419038-25419237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
18, 131
               

               
Conread position:
               
322-559
               

               
Cow position:
               
chr16:45943557-45943799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
45, 11
               

               
Conread position:
               
322-615
               

               
Cow position:
               
chr16:53792605-53792901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
37, 70
               

               
Conread position:
               
322-629
               

               
Cow position:
               
chr16:36286476-36286778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
263, 68
               

               
Conread position:
               
322-665
               

               
Cow position:
               
chr16:36120783-36121114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
18, 70
               

               
Conread position:
               
322-673
               

               
Cow position:
               
chr16:7665853-7665494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 253
               

               
Conread position:
               
322-677
               

               
Cow position:
               
chr16:7441890-7442247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
68, 15
               

               
Conread position:
               
322-677
               

               
Cow position:
               
chr16:27723420-27723068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
226, 10
               

               
Conread position:
               
323-673
               

               
Cow position:
               
chr16:42444370-42444015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
67, 109
               

               
Conread position:
               
324-514
               

               
Cow position:
               
chr16:28233094-28233285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
16, 42
               

               
Conread position:
               
324-557
               

               
Cow position:
               
chr16:12324663-12324432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
324-559
               

               
Cow position:
               
chr16:17135945-17135702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
14, 181
               

               
Conread position:
               
324-672
               

               
Cow position:
               
chr16:49336430-49336088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 77
               

               
Conread position:
               
324-673
               

               
Cow position:
               
chr16:49229565-49229912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
239, 44
               

               
Conread position:
               
324-677
               

               
Cow position:
               
chr16:3304245-3303887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 237
               

               
Conread position:
               
324-677
               

               
Cow position:
               
chr16:7151964-7152318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
93, 40
               

               
Conread position:
               
325-520
               

               
Cow position:
               
chr16:38355223-38355416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
14, 88
               

               
Conread position:
               
325-563
               

               
Cow position:
               
chr16:11359357-11359122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
14, 75
               

               
Conread position:
               
325-640
               

               
Cow position:
               
chr16:22773182-22772871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
18, 62
               

               
Conread position:
               
326-504
               

               
Cow position:
               
chr16:27326913-27327096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
326-677
               

               
Cow position:
               
chr16:23058225-23058578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
12, 243
               

               
Conread position:
               
327-513
               

               
Cow position:
               
chr16:50569467-50569284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
5, 69
               

               
Conread position:
               
327-524
               

               
Cow position:
               
chr16:4615266-4615069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
63, 124
               

               
Conread position:
               
327-561
               

               
Cow position:
               
chr16:15407349-15407584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
10, 175
               

               
Conread position:
               
327-580
               

               
Cow position:
               
chr16:23718768-23719024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
60, 104
               

               
Conread position:
               
327-582
               

               
Cow position:
               
chr16:42977682-42977416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 118
               

               
Conread position:
               
327-606
               

               
Cow position:
               
chr16:29528046-29527750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 123
               

               
Conread position:
               
327-655
               

               
Cow position:
               
chr16:39682892-39683231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
11, 124
               

               
Conread position:
               
327-672
               

               
Cow position:
               
chr16:51709943-51710268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
251, 63
               

               
Conread position:
               
327-672
               

               
Cow position:
               
chr16:54225312-54225646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
105, 11
               

               
Conread position:
               
327-677
               

               
Cow position:
               
chr16:8193662-8193303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
33, 70
               

               
Conread position:
               
327-677
               

               
Cow position:
               
chr16:35758408-35758067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
11, 49
               

               
Conread position:
               
327-677
               

               
Cow position:
               
chr16:49125315-49125673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
68, 44
               

               
Conread position:
               
328-507
               

               
Cow position:
               
chr16:13791813-13791630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
11, 103
               

               
Conread position:
               
328-515
               

               
Cow position:
               
chr16:9836576-9836756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
160, 70
               

               
Conread position:
               
328-523
               

               
Cow position:
               
chr16:33430966-33430782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
6, 63
               

               
Conread position:
               
328-562
               

               
Cow position:
               
chr16:53408742-53408958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
328-646
               

               
Cow position:
               
chr16:40333130-40333440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
234, 62
               

               
Conread position:
               
328-646
               

               
Cow position:
               
chr16:46552997-46552693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
328-671
               

               
Cow position:
               
chr16:9933365-9933020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
62, 119
               

               
Conread position:
               
328-673
               

               
Cow position:
               
chr16:32969877-32970219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
243, 67
               

               
Conread position:
               
328-676
               

               
Cow position:
               
chr16:42078644-42078984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 9
               

               
Conread position:
               
328-677
               

               
Cow position:
               
chr16:4856895-4857236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 9
               

               
Conread position:
               
329-500
               

               
Cow position:
               
chr16:5396612-5396783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
65, 71
               

               
Conread position:
               
329-501
               

               
Cow position:
               
chr16:48130192-48130362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
329-504
               

               
Cow position:
               
chr16:30646714-30646542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
9, 71
               

               
Conread position:
               
329-511
               

               
Cow position:
               
chr16:52325390-52325576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
329-513
               

               
Cow position:
               
chr16:4616479-4616662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
11, 70
               

               
Conread position:
               
329-520
               

               
Cow position:
               
chr16:16178229-16178046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
329-524
               

               
Cow position:
               
chr16:11019309-11019506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
83, 143
               

               
Conread position:
               
329-528
               

               
Cow position:
               
chr16:12091447-12091657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
329-528
               

               
Cow position:
               
chr16:15714316-15714115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
61, 122
               

               
Conread position:
               
329-538
               

               
Cow position:
               
chr16:44138287-44138496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
87, 15
               

               
Conread position:
               
329-546
               

               
Cow position:
               
chr16:5382392-5382166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
329-554
               

               
Cow position:
               
chr16:14376985-14376762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
94, 62
               

               
Conread position:
               
329-559
               

               
Cow position:
               
chr16:280488-280707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
162, 61
               

               
Conread position:
               
329-560
               

               
Cow position:
               
chr16:46548056-46548295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
329-562
               

               
Cow position:
               
chr16:7723903-7723673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
329-562
               

               
Cow position:
               
chr16:9578289-9578518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
329-562
               

               
Cow position:
               
chr16:18047948-18048183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
61, 122
               

               
Conread position:
               
329-562
               

               
Cow position:
               
chr16:28444283-28444518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
61, 71
               

               
Conread position:
               
329-562
               

               
Cow position:
               
chr16:49860437-49860204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
183, 15
               

               
Conread position:
               
329-567
               

               
Cow position:
               
chr16:42432913-42433144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
97, 61
               

               
Conread position:
               
329-575
               

               
Cow position:
               
chr16:56595183-56595428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
65, 188
               

               
Conread position:
               
329-596
               

               
Cow position:
               
chr16:45294751-45294479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
11, 26
               

               
Conread position:
               
329-620
               

               
Cow position:
               
chr16:27701058-27701340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
29, 67
               

               
Conread position:
               
329-637
               

               
Cow position:
               
chr16:30186850-30186539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
11, 58
               

               
Conread position:
               
329-639
               

               
Cow position:
               
chr16:40514289-40514587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
256, 61
               

               
Conread position:
               
329-649
               

               
Cow position:
               
chr16:7429586-7429261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
56, 130
               

               
Conread position:
               
329-650
               

               
Cow position:
               
chr16:9497054-9497393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
11, 127
               

               
Conread position:
               
329-650
               

               
Cow position:
               
chr16:18757631-18757957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
61, 27
               

               
Conread position:
               
329-651
               

               
Cow position:
               
chr16:34153365-34153686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
68, 51
               

               
Conread position:
               
329-653
               

               
Cow position:
               
chr16:55233882-55233574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
329-656
               

               
Cow position:
               
chr16:19047227-19047562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
9, 41
               

               
Conread position:
               
329-665
               

               
Cow position:
               
chr16:2223188-2223537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
329-667
               

               
Cow position:
               
chr16:45554638-45554309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
185, 56
               

               
Conread position:
               
329-669
               

               
Cow position:
               
chr16:29096121-29095803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
91, 61
               

               
Conread position:
               
329-671
               

               
Cow position:
               
chr16:31117415-31117752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
223, 20
               

               
Conread position:
               
329-672
               

               
Cow position:
               
chr16:29655518-29655189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
316, 61
               

               
Conread position:
               
329-673
               

               
Cow position:
               
chr16:935253-935583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
117, 81
               

               
Conread position:
               
329-673
               

               
Cow position:
               
chr16:8068612-8068959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 171
               

               
Conread position:
               
329-673
               

               
Cow position:
               
chr16:8522185-8522536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
11, 66
               

               
Conread position:
               
329-673
               

               
Cow position:
               
chr16:12320427-12320081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 66
               

               
Conread position:
               
329-673
               

               
Cow position:
               
chr16:45047451-45047770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
329-673
               

               
Cow position:
               
chr16:56565792-56565455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
188, 38
               

               
Conread position:
               
329-676
               

               
Cow position:
               
chr16:1548677-1549017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
115, 62
               

               
Conread position:
               
329-676
               

               
Cow position:
               
chr16:48398054-48398396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
234, 15
               

               
Conread position:
               
329-676
               

               
Cow position:
               
chr16:52170257-52169922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
329-677
               

               
Cow position:
               
chr16:11957374-11957729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
90, 66
               

               
Conread position:
               
329-677
               

               
Cow position:
               
chr16:13712738-13713057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
316, 35
               

               
Conread position:
               
329-677
               

               
Cow position:
               
chr16:23681565-23681225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
246, 66
               

               
Conread position:
               
329-677
               

               
Cow position:
               
chr16:28395887-28396245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
226, 35
               

               
Conread position:
               
329-677
               

               
Cow position:
               
chr16:29557419-29557772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 176
               

               
Conread position:
               
329-677
               

               
Cow position:
               
chr16:39165437-39165099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
200, 80
               

               
Conread position:
               
329-677
               

               
Cow position:
               
chr16:42733815-42734158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
11, 37
               

               
Conread position:
               
330-500
               

               
Cow position:
               
chr16:49733942-49734112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
330-503
               

               
Cow position:
               
chr16:19496815-19496988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
9, 24
               

               
Conread position:
               
330-555
               

               
Cow position:
               
chr16:53451908-53451684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
26, 66
               

               
Conread position:
               
330-583
               

               
Cow position:
               
chr16:31880549-31880810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
60, 177
               

               
Conread position:
               
330-642
               

               
Cow position:
               
chr16:45122245-45121929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 240
               

               
Conread position:
               
330-672
               

               
Cow position:
               
chr16:22841844-22842199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
60, 129
               

               
Conread position:
               
330-677
               

               
Cow position:
               
chr16:14754127-14754467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
166, 10
               

               
Conread position:
               
330-677
               

               
Cow position:
               
chr16:25839814-25839474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
231, 60
               

               
Conread position:
               
330-677
               

               
Cow position:
               
chr16:43308362-43308710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
86, 35
               

               
Conread position:
               
331-548
               

               
Cow position:
               
chr16:13995994-13996209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
65, 27
               

               
Conread position:
               
331-664
               

               
Cow position:
               
chr16:45348592-45348253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
59, 189
               

               
Conread position:
               
332-503
               

               
Cow position:
               
chr16:41696207-41696039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
332-545
               

               
Cow position:
               
chr16:31484465-31484673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
117, 58
               

               
Conread position:
               
332-563
               

               
Cow position:
               
chr16:32142293-32142061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
54, 118
               

               
Conread position:
               
332-563
               

               
Cow position:
               
chr16:51043847-51043628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
332-583
               

               
Cow position:
               
chr16:7136145-7136396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
230, 78
               

               
Conread position:
               
332-583
               

               
Cow position:
               
chr16:20921353-20921107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
120, 66
               

               
Conread position:
               
332-631
               

               
Cow position:
               
chr16:34998421-34998714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
58, 120
               

               
Conread position:
               
332-638
               

               
Cow position:
               
chr16:45731204-45731494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
253, 28
               

               
Conread position:
               
333-516
               

               
Cow position:
               
chr16:29311728-29311541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
333-519
               

               
Cow position:
               
chr16:18429788-18429604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
64, 80
               

               
Conread position:
               
333-524
               

               
Cow position:
               
chr16:44394487-44394290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
333-528
               

               
Cow position:
               
chr16:3032514-3032711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
333-534
               

               
Cow position:
               
chr16:56912487-56912685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
91, 25
               

               
Conread position:
               
333-536
               

               
Cow position:
               
chr16:15415526-15415738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
41, 108
               

               
Conread position:
               
333-546
               

               
Cow position:
               
chr16:50286713-50286501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
184, 0
               

               
Conread position:
               
333-552
               

               
Cow position:
               
chr16:56615302-56615524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
81, 125
               

               
Conread position:
               
333-562
               

               
Cow position:
               
chr16:17283642-17283418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
17, 59
               

               
Conread position:
               
333-607
               

               
Cow position:
               
chr16:9553249-9552986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
333-636
               

               
Cow position:
               
chr16:42398689-42399001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
57, 118
               

               
Conread position:
               
333-650
               

               
Cow position:
               
chr16:51697275-51696965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
191, 57
               

               
Conread position:
               
333-655
               

               
Cow position:
               
chr16:7076120-7075791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
57, 168
               

               
Conread position:
               
333-656
               

               
Cow position:
               
chr16:6343706-6344036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
57, 66
               

               
Conread position:
               
333-664
               

               
Cow position:
               
chr16:4059560-4059222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 16
               

               
Conread position:
               
333-664
               

               
Cow position:
               
chr16:47243162-47242827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
97, 116
               

               
Conread position:
               
333-667
               

               
Cow position:
               
chr16:23955631-23955961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
67, 31
               

               
Conread position:
               
333-670
               

               
Cow position:
               
chr16:21451050-21450706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
61, 242
               

               
Conread position:
               
333-670
               

               
Cow position:
               
chr16:50282235-50282563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
170, 31
               

               
Conread position:
               
333-673
               

               
Cow position:
               
chr16:4971821-4972162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
56, 234
               

               
Conread position:
               
333-673
               

               
Cow position:
               
chr16:24855734-24855401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 77
               

               
Conread position:
               
333-673
               

               
Cow position:
               
chr16:46433124-46433468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 63
               

               
Conread position:
               
333-676
               

               
Cow position:
               
chr16:23472942-23472603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
211, 57
               

               
Conread position:
               
333-676
               

               
Cow position:
               
chr16:47820774-47820430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 173
               

               
Conread position:
               
333-677
               

               
Cow position:
               
chr16:820451-820103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 62
               

               
Conread position:
               
333-677
               

               
Cow position:
               
chr16:9985202-9985531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
333-677
               

               
Cow position:
               
chr16:11774850-11775195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
95, 35
               

               
Conread position:
               
333-677
               

               
Cow position:
               
chr16:15824241-15824589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 131
               

               
Conread position:
               
333-677
               

               
Cow position:
               
chr16:18353754-18354097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
35, 50
               

               
Conread position:
               
333-677
               

               
Cow position:
               
chr16:23564338-23563991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
46, 199
               

               
Conread position:
               
333-677
               

               
Cow position:
               
chr16:29712616-29712275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
57, 67
               

               
Conread position:
               
333-677
               

               
Cow position:
               
chr16:51598413-51598750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 66
               

               
Conread position:
               
333-677
               

               
Cow position:
               
chr16:52274935-52275275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
229, 62
               

               
Conread position:
               
334-497
               

               
Cow position:
               
chr16:23515567-23515729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
94, 61
               

               
Conread position:
               
334-549
               

               
Cow position:
               
chr16:45047047-45046822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
30, 169
               

               
Conread position:
               
334-561
               

               
Cow position:
               
chr16:7626352-7626132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
334-625
               

               
Cow position:
               
chr16:19670159-19670440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
267, 56
               

               
Conread position:
               
335-671
               

               
Cow position:
               
chr16:51501126-51500795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
250, 60
               

               
Conread position:
               
335-673
               

               
Cow position:
               
chr16:33595750-33596076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
311, 72
               

               
Conread position:
               
335-677
               

               
Cow position:
               
chr16:3047144-3047486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 76
               

               
Conread position:
               
335-677
               

               
Cow position:
               
chr16:4275544-4275886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 76
               

               
Conread position:
               
335-677
               

               
Cow position:
               
chr16:15726154-15726515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
55, 35
               

               
Conread position:
               
336-503
               

               
Cow position:
               
chr16:19282204-19282036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
80, 63
               

               
Conread position:
               
337-486
               

               
Cow position:
               
chr16:23881017-23881163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
337-502
               

               
Cow position:
               
chr16:31011524-31011359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
337-512
               

               
Cow position:
               
chr16:51143995-51143821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
87, 58
               

               
Conread position:
               
337-530
               

               
Cow position:
               
chr16:17474952-17474769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
337-535
               

               
Cow position:
               
chr16:49174492-49174290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
57, 171
               

               
Conread position:
               
337-546
               

               
Cow position:
               
chr16:9959025-9958817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
93, 58
               

               
Conread position:
               
337-546
               

               
Cow position:
               
chr16:35297598-35297394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
193, 114
               

               
Conread position:
               
337-547
               

               
Cow position:
               
chr16:7546640-7546839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
337-562
               

               
Cow position:
               
chr16:48613282-48613503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
53, 63
               

               
Conread position:
               
337-567
               

               
Cow position:
               
chr16:17460373-17460134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
337-669
               

               
Cow position:
               
chr16:50872993-50873301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
337-671
               

               
Cow position:
               
chr16:41530112-41530430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
310, 28
               

               
Conread position:
               
337-671
               

               
Cow position:
               
chr16:50933698-50934009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
138, 31
               

               
Conread position:
               
337-673
               

               
Cow position:
               
chr16:41752385-41752713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 85
               

               
Conread position:
               
337-673
               

               
Cow position:
               
chr16:51247141-51246807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
53, 154
               

               
Conread position:
               
337-677
               

               
Cow position:
               
chr16:5725658-5725323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
107, 52
               

               
Conread position:
               
337-677
               

               
Cow position:
               
chr16:8239668-8240010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
49, 27
               

               
Conread position:
               
337-677
               

               
Cow position:
               
chr16:14685195-14685534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 72
               

               
Conread position:
               
337-677
               

               
Cow position:
               
chr16:29766516-29766191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
124, 66
               

               
Conread position:
               
338-562
               

               
Cow position:
               
chr16:22327705-22327469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
60, 27
               

               
Conread position:
               
339-562
               

               
Cow position:
               
chr16:32893813-32893600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
339-645
               

               
Cow position:
               
chr16:4910327-4910639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 63
               

               
Conread position:
               
339-672
               

               
Cow position:
               
chr16:5415551-5415903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
40, 170
               

               
Conread position:
               
339-677
               

               
Cow position:
               
chr16:16402125-16402468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
51, 174
               

               
Conread position:
               
341-535
               

               
Cow position:
               
chr16:16025636-16025435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
341-598
               

               
Cow position:
               
chr16:31561946-31561686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
220, 54
               

               
Conread position:
               
341-673
               

               
Cow position:
               
chr16:38708644-38708971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 54
               

               
Conread position:
               
342-494
               

               
Cow position:
               
chr16:27759409-27759565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
342-563
               

               
Cow position:
               
chr16:7812884-7812662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
52, 216
               

               
Conread position:
               
342-677
               

               
Cow position:
               
chr16:31348571-31348912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 144
               

               
Conread position:
               
344-481
               

               
Cow position:
               
chr16:41653161-41653026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
344-582
               

               
Cow position:
               
chr16:12010287-12010047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
344-672
               

               
Cow position:
               
chr16:18206144-18205821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
236, 70
               

               
Conread position:
               
345-531
               

               
Cow position:
               
chr16:39385677-39385494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
345-540
               

               
Cow position:
               
chr16:34204877-34205070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
345-541
               

               
Cow position:
               
chr16:17736416-17736230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
142, 45
               

               
Conread position:
               
345-567
               

               
Cow position:
               
chr16:15023446-15023664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
71, 20
               

               
Conread position:
               
345-635
               

               
Cow position:
               
chr16:14125309-14125041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
225, 45
               

               
Conread position:
               
345-666
               

               
Cow position:
               
chr16:48146466-48146790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 226
               

               
Conread position:
               
345-673
               

               
Cow position:
               
chr16:8841085-8840752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
32, 59
               

               
Conread position:
               
345-677
               

               
Cow position:
               
chr16:7702703-7702390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
307, 28
               

               
Conread position:
               
345-677
               

               
Cow position:
               
chr16:26676501-26676834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
45, 55
               

               
Conread position:
               
345-677
               

               
Cow position:
               
chr16:33646203-33645870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 46
               

               
Conread position:
               
348-503
               

               
Cow position:
               
chr16:33629605-33629454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
143, 30
               

               
Conread position:
               
348-508
               

               
Cow position:
               
chr16:11654229-11654068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
348-561
               

               
Cow position:
               
chr16:12939802-12939591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
174, 47
               

               
Conread position:
               
348-657
               

               
Cow position:
               
chr16:10504999-10504708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
237, 16
               

               
Conread position:
               
348-665
               

               
Cow position:
               
chr16:14568306-14568615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
96, 46
               

               
Conread position:
               
348-677
               

               
Cow position:
               
chr16:32781557-32781221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 158
               

               
Conread position:
               
349-640
               

               
Cow position:
               
chr16:16571084-16570807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
236, 40
               

               
Conread position:
               
349-652
               

               
Cow position:
               
chr16:23729734-23730046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
120, 41
               

               
Conread position:
               
349-677
               

               
Cow position:
               
chr16:25170577-25170246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 46
               

               
Conread position:
               
350-677
               

               
Cow position:
               
chr16:4192248-4192564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
61, 152
               

               
Conread position:
               
352-633
               

               
Cow position:
               
chr16:12523239-12522958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
65, 24
               

               
Conread position:
               
352-638
               

               
Cow position:
               
chr16:2417405-2417695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
42, 97
               

               
Conread position:
               
356-677
               

               
Cow position:
               
chr16:3246029-3246351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
245, 53
               

               
Conread position:
               
361-622
               

               
Cow position:
               
chr16:33405317-33405579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
28, 212
               

               
Conread position:
               
361-676
               

               
Cow position:
               
chr16:18679361-18679053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
28, 110
               

               
Conread position:
               
361-677
               

               
Cow position:
               
chr16:47964649-47964960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 35
               

               
Conread position:
               
362-670
               

               
Cow position:
               
chr16:41578397-41578088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 33
               

               
Conread position:
               
366-676
               

               
Cow position:
               
chr16:48006327-48006631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
191, 29
               

               
Conread position:
               
366-677
               

               
Cow position:
               
chr16:33226371-33226683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
367-677
               

               
Cow position:
               
chr16:11615077-11615377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 203
               

               
Conread position:
               
377-671
               

               
Cow position:
               
chr16:45610144-45609852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
39, 76
               

               
Conread position:
               
380-634
               

               
Cow position:
               
chr16:21040179-21039926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
48, 9
               

               
Conread position:
               
381-672
               

               
Cow position:
               
chr16:51112729-51113017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
269, 14
               

               
Conread position:
               
383-672
               

               
Cow position:
               
chr16:7499203-7498921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
36, 135
               

               
Conread position:
               
385-673
               

               
Cow position:
               
chr16:7550115-7549827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
175, 40
               

               
Conread position:
               
385-677
               

               
Cow position:
               
chr16:15960141-15960436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
184, 0
               

               
Conread position:
               
386-559
               

               
Cow position:
               
chr16:8273690-8273863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
386-677
               

               
Cow position:
               
chr16:17627077-17626785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
86, 53
               

               
Conread position:
               
387-578
               

               
Cow position:
               
chr16:1415156-1415343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
174, 124
               

               
Conread position:
               
388-503
               

               
Cow position:
               
chr16:51915715-51915601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
116
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
388-528
               

               
Cow position:
               
chr16:15203223-15203363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
388-619
               

               
Cow position:
               
chr16:3114685-3114451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
196, 0
               

               
Conread position:
               
388-676
               

               
Cow position:
               
chr16:3634262-3633969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
159, 229
               

               
Conread position:
               
388-677
               

               
Cow position:
               
chr16:11102679-11102969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
197, 22
               

               
Conread position:
               
388-677
               

               
Cow position:
               
chr16:22009295-22009016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
43, 38
               

               
Conread position:
               
388-677
               

               
Cow position:
               
chr16:31122104-31122390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
174, 145
               

               
Conread position:
               
388-677
               

               
Cow position:
               
chr16:43105373-43105658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
197, 31
               

               
Conread position:
               
388-677
               

               
Cow position:
               
chr16:52133372-52133660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
258, 37
               

               
Conread position:
               
389-558
               

               
Cow position:
               
chr16:13414523-13414690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
389-670
               

               
Cow position:
               
chr16:5364046-5363758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 0
               

               
Conread position:
               
389-673
               

               
Cow position:
               
chr16:43276164-43275881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
30, 131
               

               
Conread position:
               
391-563
               

               
Cow position:
               
chr16:6310558-6310730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
391-673
               

               
Cow position:
               
chr16:54342127-54341847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
67, 26
               

               
Conread position:
               
391-677
               

               
Cow position:
               
chr16:39172005-39172299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
163, 85
               

               
Conread position:
               
393-513
               

               
Cow position:
               
chr16:16280232-16280352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
393-537
               

               
Cow position:
               
chr16:51382482-51382623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
393-649
               

               
Cow position:
               
chr16:17903504-17903766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
163, 0
               

               
Conread position:
               
393-677
               

               
Cow position:
               
chr16:14758878-14758587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
36, 108
               

               
Conread position:
               
393-677
               

               
Cow position:
               
chr16:30715645-30715351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 28
               

               
Conread position:
               
397-567
               

               
Cow position:
               
chr16:17291884-17292055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
400-677
               

               
Cow position:
               
chr16:48340559-48340840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 253
               

               
Conread position:
               
401-677
               

               
Cow position:
               
chr16:53627296-53627572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
167, 25
               

               
Conread position:
               
403-650
               

               
Cow position:
               
chr16:54734367-54734128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
19, 55
               

               
Conread position:
               
405-516
               

               
Cow position:
               
chr16:21593962-21594073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
112
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
405-530
               

               
Cow position:
               
chr16:20265434-20265559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
405-657
               

               
Cow position:
               
chr16:50688650-50688399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
174, 159
               

               
Conread position:
               
405-658
               

               
Cow position:
               
chr16:53089229-53089466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
405-673
               

               
Cow position:
               
chr16:10773251-10772992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
13, 48
               

               
Conread position:
               
405-677
               

               
Cow position:
               
chr16:8366702-8366965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
49, 36
               

               
Conread position:
               
405-677
               

               
Cow position:
               
chr16:48190884-48191146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
180, 47
               

               
Conread position:
               
407-555
               

               
Cow position:
               
chr16:12097768-12097620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
407-677
               

               
Cow position:
               
chr16:42241989-42242261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 69
               

               
Conread position:
               
410-664
               

               
Cow position:
               
chr16:30096012-30096263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
35, 10
               

               
Conread position:
               
411-540
               

               
Cow position:
               
chr16:24591976-24591846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
411-559
               

               
Cow position:
               
chr16:29886058-29886208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
32, 37
               

               
Conread position:
               
411-562
               

               
Cow position:
               
chr16:33530532-33530381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
411-578
               

               
Cow position:
               
chr16:46430030-46430193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
411-612
               

               
Cow position:
               
chr16:40700614-40700808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
174, 40
               

               
Conread position:
               
411-619
               

               
Cow position:
               
chr16:30358940-30359147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
164, 0
               

               
Conread position:
               
411-630
               

               
Cow position:
               
chr16:45785860-45785650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
168, 175
               

               
Conread position:
               
411-647
               

               
Cow position:
               
chr16:33054358-33054597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
157, 236
               

               
Conread position:
               
411-664
               

               
Cow position:
               
chr16:35188372-35188121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
239, 55
               

               
Conread position:
               
411-671
               

               
Cow position:
               
chr16:48369825-48370086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
13, 92
               

               
Conread position:
               
411-671
               

               
Cow position:
               
chr16:48385281-48385539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
174, 9
               

               
Conread position:
               
411-672
               

               
Cow position:
               
chr16:6379002-6379247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
244, 86
               

               
Conread position:
               
411-672
               

               
Cow position:
               
chr16:12634008-12633746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
19, 155
               

               
Conread position:
               
411-672
               

               
Cow position:
               
chr16:25380372-25380636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
104, 150
               

               
Conread position:
               
411-672
               

               
Cow position:
               
chr16:29608632-29608379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
174, 105
               

               
Conread position:
               
411-673
               

               
Cow position:
               
chr16:11806795-11806535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 154
               

               
Conread position:
               
411-673
               

               
Cow position:
               
chr16:35623127-35623382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
171, 86
               

               
Conread position:
               
411-677
               

               
Cow position:
               
chr16:5257119-5256855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
152, 173
               

               
Conread position:
               
411-677
               

               
Cow position:
               
chr16:7505207-7504943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
174, 61
               

               
Conread position:
               
411-677
               

               
Cow position:
               
chr16:8811973-8812227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
247, 21
               

               
Conread position:
               
411-677
               

               
Cow position:
               
chr16:18141206-18141482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
164, 15
               

               
Conread position:
               
411-677
               

               
Cow position:
               
chr16:40562354-40562086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
174, 21
               

               
Conread position:
               
411-677
               

               
Cow position:
               
chr16:49169258-49169530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
150, 0
               

               
Conread position:
               
412-553
               

               
Cow position:
               
chr16:30897877-30898017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
118, 0
               

               
Conread position:
               
412-562
               

               
Cow position:
               
chr16:33235040-33235189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
16, 81
               

               
Conread position:
               
412-620
               

               
Cow position:
               
chr16:44239537-44239315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
412-677
               

               
Cow position:
               
chr16:24826195-24825927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
135, 152
               

               
Conread position:
               
412-677
               

               
Cow position:
               
chr16:32132630-32132380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
6, 47
               

               
Conread position:
               
412-677
               

               
Cow position:
               
chr16:39616844-39616598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
215, 82
               

               
Conread position:
               
413-545
               

               
Cow position:
               
chr16:40745238-40745370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
413-649
               

               
Cow position:
               
chr16:18052451-18052214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
31, 36
               

               
Conread position:
               
413-673
               

               
Cow position:
               
chr16:53086220-53086470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
246, 111
               

               
Conread position:
               
414-575
               

               
Cow position:
               
chr16:12133982-12133819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
414-627
               

               
Cow position:
               
chr16:12501041-12501256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
30, 35
               

               
Conread position:
               
414-628
               

               
Cow position:
               
chr16:32807173-32807388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
170, 60
               

               
Conread position:
               
414-646
               

               
Cow position:
               
chr16:11940157-11939928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
124, 0
               

               
Conread position:
               
414-654
               

               
Cow position:
               
chr16:42241165-42240927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
121, 12
               

               
Conread position:
               
414-673
               

               
Cow position:
               
chr16:20069952-20069687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
171, 150
               

               
Conread position:
               
414-673
               

               
Cow position:
               
chr16:54679784-54679528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
172, 18
               

               
Conread position:
               
414-677
               

               
Cow position:
               
chr16:25387095-25386836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
14, 91
               

               
Conread position:
               
414-677
               

               
Cow position:
               
chr16:48494434-48494698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
171, 228
               

               
Conread position:
               
415-558
               

               
Cow position:
               
chr16:22329280-22329137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
415-562
               

               
Cow position:
               
chr16:30027992-30027845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
415-625
               

               
Cow position:
               
chr16:39778018-39777810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
415-627
               

               
Cow position:
               
chr16:48545940-48545726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
29, 37
               

               
Conread position:
               
415-649
               

               
Cow position:
               
chr16:48086751-48086984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
148, 41
               

               
Conread position:
               
415-655
               

               
Cow position:
               
chr16:42633625-42633873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
150, 117
               

               
Conread position:
               
415-670
               

               
Cow position:
               
chr16:31978067-31978325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
170, 157
               

               
Conread position:
               
415-672
               

               
Cow position:
               
chr16:15809097-15808835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
110, 118
               

               
Conread position:
               
415-677
               

               
Cow position:
               
chr16:12360856-12361121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
75, 11
               

               
Conread position:
               
415-677
               

               
Cow position:
               
chr16:18402805-18402540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 36
               

               
Conread position:
               
415-677
               

               
Cow position:
               
chr16:37452495-37452763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
133, 0
               

               
Conread position:
               
415-677
               

               
Cow position:
               
chr16:44744014-44744283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
164, 151
               

               
Conread position:
               
416-531
               

               
Cow position:
               
chr16:9695722-9695610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
116
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
416-535
               

               
Cow position:
               
chr16:29145168-29145283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
416-547
               

               
Cow position:
               
chr16:40540447-40540323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
416-616
               

               
Cow position:
               
chr16:22919585-22919389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
148, 125
               

               
Conread position:
               
416-626
               

               
Cow position:
               
chr16:44683540-44683755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
86, 9
               

               
Conread position:
               
416-640
               

               
Cow position:
               
chr16:13578743-13578969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
169, 151
               

               
Conread position:
               
416-653
               

               
Cow position:
               
chr16:42340314-42340075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
153, 200
               

               
Conread position:
               
416-656
               

               
Cow position:
               
chr16:17282776-17282541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
169, 83
               

               
Conread position:
               
416-657
               

               
Cow position:
               
chr16:47855056-47854818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
185, 31
               

               
Conread position:
               
416-672
               

               
Cow position:
               
chr16:53830474-53830725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
140, 93
               

               
Conread position:
               
416-673
               

               
Cow position:
               
chr16:35297195-35296932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
110, 156
               

               
Conread position:
               
416-673
               

               
Cow position:
               
chr16:51869757-51869499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
226, 0
               

               
Conread position:
               
416-676
               

               
Cow position:
               
chr16:4698872-4699124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
172, 10
               

               
Conread position:
               
416-677
               

               
Cow position:
               
chr16:3614859-3614602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
9, 71
               

               
Conread position:
               
416-677
               

               
Cow position:
               
chr16:6319321-6319053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
100, 141
               

               
Conread position:
               
416-677
               

               
Cow position:
               
chr16:8025737-8025990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
147, 0
               

               
Conread position:
               
416-677
               

               
Cow position:
               
chr16:8076384-8076653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
50, 35
               

               
Conread position:
               
416-677
               

               
Cow position:
               
chr16:8933310-8933571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
169, 73
               

               
Conread position:
               
416-677
               

               
Cow position:
               
chr16:39394688-39394432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
20, 154
               

               
Conread position:
               
417-622
               

               
Cow position:
               
chr16:34220303-34220094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
155, 0
               

               
Conread position:
               
417-639
               

               
Cow position:
               
chr16:29677517-29677737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
166, 0
               

               
Conread position:
               
417-640
               

               
Cow position:
               
chr16:4399852-4399629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
417-650
               

               
Cow position:
               
chr16:13969250-13969491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
20, 35
               

               
Conread position:
               
417-677
               

               
Cow position:
               
chr16:570803-571058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
120, 89
               

               
Conread position:
               
417-677
               

               
Cow position:
               
chr16:4626274-4626536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 181
               

               
Conread position:
               
417-677
               

               
Cow position:
               
chr16:4902702-4902444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
138, 9
               

               
Conread position:
               
417-677
               

               
Cow position:
               
chr16:20633759-20634023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
67, 113
               

               
Conread position:
               
417-677
               

               
Cow position:
               
chr16:43800802-43801064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
163, 37
               

               
Conread position:
               
418-614
               

               
Cow position:
               
chr16:16933235-16933037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
93, 24
               

               
Conread position:
               
418-640
               

               
Cow position:
               
chr16:43674990-43674767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
63, 102
               

               
Conread position:
               
418-657
               

               
Cow position:
               
chr16:33267834-33267591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
22, 119
               

               
Conread position:
               
418-673
               

               
Cow position:
               
chr16:22380238-22380496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
68, 88
               

               
Conread position:
               
418-677
               

               
Cow position:
               
chr16:5896534-5896274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
162, 56
               

               
Conread position:
               
419-640
               

               
Cow position:
               
chr16:10945326-10945538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
25, 13
               

               
Conread position:
               
419-677
               

               
Cow position:
               
chr16:8315079-8315329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
420-542
               

               
Cow position:
               
chr16:31046566-31046688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
420-546
               

               
Cow position:
               
chr16:13252196-13252318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
420-559
               

               
Cow position:
               
chr16:55945026-55945165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
420-622
               

               
Cow position:
               
chr16:45299814-45300015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
38, 33
               

               
Conread position:
               
420-636
               

               
Cow position:
               
chr16:18745844-18745631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
164, 9
               

               
Conread position:
               
420-649
               

               
Cow position:
               
chr16:21317479-21317712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
140, 0
               

               
Conread position:
               
420-672
               

               
Cow position:
               
chr16:22808444-22808692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
103, 146
               

               
Conread position:
               
420-673
               

               
Cow position:
               
chr16:5836699-5836442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
86, 219
               

               
Conread position:
               
420-673
               

               
Cow position:
               
chr16:42345500-42345744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
182, 12
               

               
Conread position:
               
420-676
               

               
Cow position:
               
chr16:37669623-37669880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
165, 152
               

               
Conread position:
               
420-676
               

               
Cow position:
               
chr16:43505697-43505942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
420-676
               

               
Cow position:
               
chr16:48493294-48493035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
165, 0
               

               
Conread position:
               
420-677
               

               
Cow position:
               
chr16:13195225-13195486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
13, 56
               

               
Conread position:
               
420-677
               

               
Cow position:
               
chr16:16096849-16096591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
141, 19
               

               
Conread position:
               
420-677
               

               
Cow position:
               
chr16:17289061-17288796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
165, 149
               

               
Conread position:
               
420-677
               

               
Cow position:
               
chr16:26372837-26373099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
148, 54
               

               
Conread position:
               
420-677
               

               
Cow position:
               
chr16:36203504-36203760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
94, 160
               

               
Conread position:
               
421-654
               

               
Cow position:
               
chr16:21761857-21762093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
138, 128
               

               
Conread position:
               
421-664
               

               
Cow position:
               
chr16:23366353-23366110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
158, 84
               

               
Conread position:
               
421-673
               

               
Cow position:
               
chr16:19408415-19408657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
142, 0
               

               
Conread position:
               
421-677
               

               
Cow position:
               
chr16:11105665-11105408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
164, 17
               

               
Conread position:
               
421-677
               

               
Cow position:
               
chr16:11791123-11790872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
152, 78
               

               
Conread position:
               
421-677
               

               
Cow position:
               
chr16:23738294-23738034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
142, 0
               

               
Conread position:
               
422-677
               

               
Cow position:
               
chr16:23871538-23871793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
168, 153
               

               
Conread position:
               
423-628
               

               
Cow position:
               
chr16:27160753-27160961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
156, 146
               

               
Conread position:
               
423-640
               

               
Cow position:
               
chr16:45702861-45703075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
118, 0
               

               
Conread position:
               
425-677
               

               
Cow position:
               
chr16:5636693-5636444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
141, 69
               

               
Conread position:
               
425-677
               

               
Cow position:
               
chr16:38119341-38119589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
160, 124
               

               
Conread position:
               
425-677
               

               
Cow position:
               
chr16:41696983-41697232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
225, 135
               

               
Conread position:
               
426-561
               

               
Cow position:
               
chr16:11391013-11390876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
426-617
               

               
Cow position:
               
chr16:7980897-7980707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
158, 87
               

               
Conread position:
               
426-628
               

               
Cow position:
               
chr16:38091115-38091320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
152, 43
               

               
Conread position:
               
426-668
               

               
Cow position:
               
chr16:39401908-39402134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
426-677
               

               
Cow position:
               
chr16:11008453-11008200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
14, 32
               

               
Conread position:
               
426-677
               

               
Cow position:
               
chr16:27261848-27262095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
126, 12
               

               
Conread position:
               
426-677
               

               
Cow position:
               
chr16:43661559-43661300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
28, 192
               

               
Conread position:
               
428-656
               

               
Cow position:
               
chr16:30135801-30136018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
134, 45
               

               
Conread position:
               
429-677
               

               
Cow position:
               
chr16:12060521-12060272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
156, 120
               

               
Conread position:
               
431-677
               

               
Cow position:
               
chr16:52889308-52889553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
154, 50
               

               
Conread position:
               
432-645
               

               
Cow position:
               
chr16:33869663-33869873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
114, 0
               

               
Conread position:
               
436-672
               

               
Cow position:
               
chr16:42217594-42217826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
148, 7
               

               
Conread position:
               
436-677
               

               
Cow position:
               
chr16:10352981-10352726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
14, 246
               

               
Conread position:
               
445-672
               

               
Cow position:
               
chr16:4981287-4981522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
446-677
               

               
Cow position:
               
chr16:7077655-7077888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
133, 125
               

               
Conread position:
               
447-673
               

               
Cow position:
               
chr16:39646631-39646408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
168, 17
               

               
Conread position:
               
447-677
               

               
Cow position:
               
chr16:39513989-39514220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
82, 42
               

               
Conread position:
               
447-677
               

               
Cow position:
               
chr16:47643501-47643272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 215
               

               
Conread position:
               
448-562
               

               
Cow position:
               
chr16:25484421-25484311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
115
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
448-677
               

               
Cow position:
               
chr16:50521562-50521333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
139, 14
               

               
Conread position:
               
455-677
               

               
Cow position:
               
chr16:53891707-53891926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
456-650
               

               
Cow position:
               
chr16:14361181-14360989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
132, 95
               

               
Conread position:
               
456-676
               

               
Cow position:
               
chr16:13752054-13752268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
129, 100
               

               
Conread position:
               
458-670
               

               
Cow position:
               
chr16:29380326-29380116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
17, 108
               

               
Conread position:
               
461-655
               

               
Cow position:
               
chr16:35937410-35937215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
124, 37
               

               
Conread position:
               
461-672
               

               
Cow position:
               
chr16:45645615-45645824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
51, 32
               

               
Conread position:
               
462-673
               

               
Cow position:
               
chr16:33790766-33790970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
51, 37
               

               
Conread position:
               
464-672
               

               
Cow position:
               
chr16:8279722-8279926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
135, 37
               

               
Conread position:
               
464-677
               

               
Cow position:
               
chr16:9136238-9136031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
98, 46
               

               
Conread position:
               
465-677
               

               
Cow position:
               
chr16:22860700-22860905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
466-677
               

               
Cow position:
               
chr16:13232881-13233093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
467-665
               

               
Cow position:
               
chr16:27020138-27019941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
185, 113
               

               
Conread position:
               
467-673
               

               
Cow position:
               
chr16:54084103-54083894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
103, 193
               

               
Conread position:
               
467-677
               

               
Cow position:
               
chr16:601012-600804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
115, 7
               

               
Conread position:
               
467-677
               

               
Cow position:
               
chr16:24672291-24672502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
129, 29
               

               
Conread position:
               
467-677
               

               
Cow position:
               
chr16:34168653-34168450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
180, 97
               

               
Conread position:
               
467-677
               

               
Cow position:
               
chr16:35195546-35195750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
180, 92
               

               
Conread position:
               
467-677
               

               
Cow position:
               
chr16:37380337-37380122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
93, 109
               

               
Conread position:
               
470-676
               

               
Cow position:
               
chr16:38191537-38191328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
93, 103
               

               
Conread position:
               
470-677
               

               
Cow position:
               
chr16:10650824-10651035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
116, 0
               

               
Conread position:
               
472-642
               

               
Cow position:
               
chr16:1725012-1725187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
12, 29
               

               
Conread position:
               
473-672
               

               
Cow position:
               
chr16:28692667-28692860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
173, 31
               

               
Conread position:
               
475-671
               

               
Cow position:
               
chr16:11568064-11568256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
96, 24
               

               
Conread position:
               
475-673
               

               
Cow position:
               
chr16:14699977-14699778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
109, 18
               

               
Conread position:
               
478-673
               

               
Cow position:
               
chr16:45535231-45535039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
108, 12
               

               
Conread position:
               
478-677
               

               
Cow position:
               
chr16:30515533-30515737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
478-677
               

               
Cow position:
               
chr16:50533109-50532919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
93, 7
               

               
Conread position:
               
480-677
               

               
Cow position:
               
chr16:21905216-21905021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
90, 45
               

               
Conread position:
               
483-673
               

               
Cow position:
               
chr16:4145114-4144923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
103, 33
               

               
Conread position:
               
496-673
               

               
Cow position:
               
chr16:53037595-53037764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
89, 52
               

               
Conread position:
               
500-673
               

               
Cow position:
               
chr16:22868143-22868316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
11, 76
               

               
Conread position:
               
502-677
               

               
Cow position:
               
chr16:24148193-24148013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
507-677
               

               
Cow position:
               
chr16:13791544-13791372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
89, 83
               

               
Conread position:
               
511-677
               

               
Cow position:
               
chr16:35168753-35168584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
61, 102
               

               
Conread position:
               
512-650
               

               
Cow position:
               
chr16:8795927-8796067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
72, 65
               

               
Conread position:
               
519-677
               

               
Cow position:
               
chr16:39417105-39417262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
521-677
               

               
Cow position:
               
chr16:47620392-47620236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
65, 26
               

               
Conread position:
               
522-677
               

               
Cow position:
               
chr16:16177830-16177673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
47, 130
               
Show alignments to all cow chromosomes.