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Cow genome map

           
Conread name:
           
Liv1-LVRM1B030176
        

               
Conread position:
               
275-623
               

               
Cow position:
               
chr5:20843116-20843465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
194, 14
               

               
Conread position:
               
275-677
               

               
Cow position:
               
chr5:15364156-15363775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 61
               

               
Conread position:
               
279-536
               

               
Cow position:
               
chr5:55783685-55783941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
30, 19
               

               
Conread position:
               
281-569
               

               
Cow position:
               
chr5:39036061-39035770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
10, 168
               

               
Conread position:
               
282-546
               

               
Cow position:
               
chr5:2240705-2240976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 109
               

               
Conread position:
               
286-677
               

               
Cow position:
               
chr5:35208534-35208147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
119, 47
               

               
Conread position:
               
292-655
               

               
Cow position:
               
chr5:30233172-30232802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 11
               

               
Conread position:
               
296-604
               

               
Cow position:
               
chr5:63192494-63192788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
7, 13
               

               
Conread position:
               
297-501
               

               
Cow position:
               
chr5:72310953-72310738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
11, 163
               

               
Conread position:
               
297-522
               

               
Cow position:
               
chr5:16185643-16185415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
15, 38
               

               
Conread position:
               
298-528
               

               
Cow position:
               
chr5:3677987-3677754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
97, 17
               

               
Conread position:
               
304-657
               

               
Cow position:
               
chr5:52668296-52667931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
34, 100
               

               
Conread position:
               
305-522
               

               
Cow position:
               
chr5:12562507-12562723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
85, 28
               

               
Conread position:
               
305-677
               

               
Cow position:
               
chr5:44796481-44796849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 111
               

               
Conread position:
               
305-677
               

               
Cow position:
               
chr5:53055300-53055679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
25, 150
               

               
Conread position:
               
306-561
               

               
Cow position:
               
chr5:15364525-15364267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
27, 95
               

               
Conread position:
               
306-655
               

               
Cow position:
               
chr5:46681470-46681812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
85, 109
               

               
Conread position:
               
306-677
               

               
Cow position:
               
chr5:24349369-24348988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
31, 6
               

               
Conread position:
               
307-677
               

               
Cow position:
               
chr5:21829116-21828747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
278, 57
               

               
Conread position:
               
308-640
               

               
Cow position:
               
chr5:12760872-12761194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
82, 22
               

               
Conread position:
               
308-640
               

               
Cow position:
               
chr5:70271121-70270783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
7, 109
               

               
Conread position:
               
308-650
               

               
Cow position:
               
chr5:49685016-49685362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
54, 138
               

               
Conread position:
               
308-673
               

               
Cow position:
               
chr5:23140335-23140693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
32, 75
               

               
Conread position:
               
309-561
               

               
Cow position:
               
chr5:34347481-34347730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
22, 144
               

               
Conread position:
               
309-655
               

               
Cow position:
               
chr5:42064459-42064106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
309-657
               

               
Cow position:
               
chr5:50858185-50857838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
79, 24
               

               
Conread position:
               
309-676
               

               
Cow position:
               
chr5:44446623-44446986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 83
               

               
Conread position:
               
309-677
               

               
Cow position:
               
chr5:991721-991347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
163, 19
               

               
Conread position:
               
309-677
               

               
Cow position:
               
chr5:14314763-14314406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 21
               

               
Conread position:
               
310-677
               

               
Cow position:
               
chr5:72895934-72895569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
111, 23
               

               
Conread position:
               
311-477
               

               
Cow position:
               
chr5:3626931-3627095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
12, 86
               

               
Conread position:
               
311-503
               

               
Cow position:
               
chr5:21721228-21721414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
12, 23
               

               
Conread position:
               
311-650
               

               
Cow position:
               
chr5:29097611-29097275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
29, 5
               

               
Conread position:
               
311-669
               

               
Cow position:
               
chr5:48867220-48867575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
13, 82
               

               
Conread position:
               
312-480
               

               
Cow position:
               
chr5:4728317-4728153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
10, 79
               

               
Conread position:
               
312-517
               

               
Cow position:
               
chr5:39815254-39815459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
78, 21
               

               
Conread position:
               
312-521
               

               
Cow position:
               
chr5:54127532-54127328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
312-530
               

               
Cow position:
               
chr5:49821681-49821457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
312-673
               

               
Cow position:
               
chr5:22667317-22666978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 79
               

               
Conread position:
               
312-677
               

               
Cow position:
               
chr5:18289366-18289010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
17, 84
               

               
Conread position:
               
313-489
               

               
Cow position:
               
chr5:12504546-12504720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
26, 84
               

               
Conread position:
               
313-530
               

               
Cow position:
               
chr5:29149149-29148920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
13, 196
               

               
Conread position:
               
313-568
               

               
Cow position:
               
chr5:69383501-69383246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 86
               

               
Conread position:
               
313-677
               

               
Cow position:
               
chr5:35246857-35247229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 240
               

               
Conread position:
               
314-497
               

               
Cow position:
               
chr5:5030680-5030505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
105, 14
               

               
Conread position:
               
314-536
               

               
Cow position:
               
chr5:51289356-51289568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
314-561
               

               
Cow position:
               
chr5:6520251-6520009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
177, 81
               

               
Conread position:
               
314-627
               

               
Cow position:
               
chr5:41935413-41935725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
76, 25
               

               
Conread position:
               
315-489
               

               
Cow position:
               
chr5:32976009-32975828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
23, 52
               

               
Conread position:
               
315-507
               

               
Cow position:
               
chr5:67950540-67950734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
23, 118
               

               
Conread position:
               
315-508
               

               
Cow position:
               
chr5:60207949-60207759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
315-513
               

               
Cow position:
               
chr5:41226758-41226960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
22, 86
               

               
Conread position:
               
315-529
               

               
Cow position:
               
chr5:54341010-54340793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
75, 42
               

               
Conread position:
               
315-532
               

               
Cow position:
               
chr5:19079484-19079279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
315-550
               

               
Cow position:
               
chr5:17828235-17828470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
75, 18
               

               
Conread position:
               
315-560
               

               
Cow position:
               
chr5:52853214-52852970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
9, 79
               

               
Conread position:
               
315-621
               

               
Cow position:
               
chr5:7012608-7012911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
97, 15
               

               
Conread position:
               
315-657
               

               
Cow position:
               
chr5:36650796-36650450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
75, 15
               

               
Conread position:
               
315-676
               

               
Cow position:
               
chr5:46512521-46512881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 56
               

               
Conread position:
               
315-677
               

               
Cow position:
               
chr5:55177124-55176771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
248, 66
               

               
Conread position:
               
315-677
               

               
Cow position:
               
chr5:63647236-63647595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
85, 15
               

               
Conread position:
               
316-513
               

               
Cow position:
               
chr5:57086820-57087017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
74, 17
               

               
Conread position:
               
316-622
               

               
Cow position:
               
chr5:59626725-59627038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 83
               

               
Conread position:
               
316-646
               

               
Cow position:
               
chr5:28302516-28302835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
203, 14
               

               
Conread position:
               
316-673
               

               
Cow position:
               
chr5:66582211-66581848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
78, 17
               

               
Conread position:
               
316-677
               

               
Cow position:
               
chr5:41165325-41164969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
269, 79
               

               
Conread position:
               
316-677
               

               
Cow position:
               
chr5:49920168-49919805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
74, 30
               

               
Conread position:
               
316-677
               

               
Cow position:
               
chr5:56014965-56014615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
269, 79
               

               
Conread position:
               
317-485
               

               
Cow position:
               
chr5:58487617-58487449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
10, 85
               

               
Conread position:
               
317-497
               

               
Cow position:
               
chr5:57447423-57447604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
73, 20
               

               
Conread position:
               
317-500
               

               
Cow position:
               
chr5:19968117-19968300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
15, 45
               

               
Conread position:
               
317-501
               

               
Cow position:
               
chr5:19626815-19626636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
317-507
               

               
Cow position:
               
chr5:34918587-34918398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
16, 76
               

               
Conread position:
               
317-524
               

               
Cow position:
               
chr5:3817444-3817652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
21, 79
               

               
Conread position:
               
317-525
               

               
Cow position:
               
chr5:38647899-38647674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
317-528
               

               
Cow position:
               
chr5:15991403-15991608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
317-561
               

               
Cow position:
               
chr5:5760065-5760315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
23, 157
               

               
Conread position:
               
317-634
               

               
Cow position:
               
chr5:60209908-60210222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
85, 12
               

               
Conread position:
               
317-650
               

               
Cow position:
               
chr5:43391266-43390940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
169, 16
               

               
Conread position:
               
317-671
               

               
Cow position:
               
chr5:39333286-39333652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
21, 89
               

               
Conread position:
               
317-672
               

               
Cow position:
               
chr5:3242252-3242590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
26, 75
               

               
Conread position:
               
317-672
               

               
Cow position:
               
chr5:49474314-49474659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
243, 14
               

               
Conread position:
               
317-673
               

               
Cow position:
               
chr5:64026768-64027123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 12
               

               
Conread position:
               
317-673
               

               
Cow position:
               
chr5:72902998-72903347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
127, 69
               

               
Conread position:
               
317-676
               

               
Cow position:
               
chr5:50723291-50722930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
21, 86
               

               
Conread position:
               
317-677
               

               
Cow position:
               
chr5:30276926-30276578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 15
               

               
Conread position:
               
317-677
               

               
Cow position:
               
chr5:69461582-69461215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 12
               

               
Conread position:
               
318-540
               

               
Cow position:
               
chr5:74039765-74039984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
104, 73
               

               
Conread position:
               
318-672
               

               
Cow position:
               
chr5:35763485-35763161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
271, 42
               

               
Conread position:
               
318-673
               

               
Cow position:
               
chr5:12902160-12901800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 133
               

               
Conread position:
               
318-673
               

               
Cow position:
               
chr5:56028307-56028642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
318-676
               

               
Cow position:
               
chr5:19278463-19278818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 19
               

               
Conread position:
               
318-677
               

               
Cow position:
               
chr5:27155243-27154904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
58, 105
               

               
Conread position:
               
319-473
               

               
Cow position:
               
chr5:74050061-74049910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
75, 14
               

               
Conread position:
               
319-482
               

               
Cow position:
               
chr5:17537439-17537596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
319-498
               

               
Cow position:
               
chr5:59662811-59662997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
19, 82
               

               
Conread position:
               
319-499
               

               
Cow position:
               
chr5:66287181-66287005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
108, 27
               

               
Conread position:
               
319-504
               

               
Cow position:
               
chr5:52849321-52849140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
319-505
               

               
Cow position:
               
chr5:74065284-74065463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
319-514
               

               
Cow position:
               
chr5:31648657-31648465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
18, 73
               

               
Conread position:
               
319-518
               

               
Cow position:
               
chr5:43839752-43839958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
11, 136
               

               
Conread position:
               
319-520
               

               
Cow position:
               
chr5:41736422-41736221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
71, 47
               

               
Conread position:
               
319-533
               

               
Cow position:
               
chr5:29172230-29172013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
40, 13
               

               
Conread position:
               
319-533
               

               
Cow position:
               
chr5:34288014-34288224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 91
               

               
Conread position:
               
319-547
               

               
Cow position:
               
chr5:64060688-64060458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
12, 83
               

               
Conread position:
               
319-553
               

               
Cow position:
               
chr5:7177394-7177157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
21, 83
               

               
Conread position:
               
319-557
               

               
Cow position:
               
chr5:12300150-12299913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
28, 14
               

               
Conread position:
               
319-560
               

               
Cow position:
               
chr5:30247287-30247523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
71, 14
               

               
Conread position:
               
319-561
               

               
Cow position:
               
chr5:34914812-34915055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 84
               

               
Conread position:
               
319-561
               

               
Cow position:
               
chr5:67634270-67634519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
71, 14
               

               
Conread position:
               
319-562
               

               
Cow position:
               
chr5:65760293-65760532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
10, 132
               

               
Conread position:
               
319-603
               

               
Cow position:
               
chr5:52001382-52001666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
21, 48
               

               
Conread position:
               
319-607
               

               
Cow position:
               
chr5:15471157-15470883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
238, 13
               

               
Conread position:
               
319-616
               

               
Cow position:
               
chr5:63241221-63240918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
16, 214
               

               
Conread position:
               
319-619
               

               
Cow position:
               
chr5:20994851-20995156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
97, 14
               

               
Conread position:
               
319-628
               

               
Cow position:
               
chr5:54751049-54750740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
14, 215
               

               
Conread position:
               
319-646
               

               
Cow position:
               
chr5:65140539-65140199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
78, 14
               

               
Conread position:
               
319-656
               

               
Cow position:
               
chr5:64555773-64555432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
20, 261
               

               
Conread position:
               
319-657
               

               
Cow position:
               
chr5:17062844-17063189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
71, 22
               

               
Conread position:
               
319-657
               

               
Cow position:
               
chr5:54048111-54048450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
97, 13
               

               
Conread position:
               
319-664
               

               
Cow position:
               
chr5:12434773-12434428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
228, 14
               

               
Conread position:
               
319-665
               

               
Cow position:
               
chr5:43370951-43371306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
21, 220
               

               
Conread position:
               
319-672
               

               
Cow position:
               
chr5:33560499-33560848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
330, 14
               

               
Conread position:
               
319-673
               

               
Cow position:
               
chr5:45225582-45225940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
32, 21
               

               
Conread position:
               
319-673
               

               
Cow position:
               
chr5:55966631-55966994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 131
               

               
Conread position:
               
319-673
               

               
Cow position:
               
chr5:69338051-69337714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
308, 11
               

               
Conread position:
               
319-677
               

               
Cow position:
               
chr5:24995980-24996342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 166
               

               
Conread position:
               
319-677
               

               
Cow position:
               
chr5:32975321-32975672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
71, 14
               

               
Conread position:
               
319-677
               

               
Cow position:
               
chr5:45845450-45845811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
139, 79
               

               
Conread position:
               
319-677
               

               
Cow position:
               
chr5:47602048-47601700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
320-536
               

               
Cow position:
               
chr5:37842040-37842256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
108, 86
               

               
Conread position:
               
320-559
               

               
Cow position:
               
chr5:61049574-61049332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
17, 131
               

               
Conread position:
               
320-598
               

               
Cow position:
               
chr5:49341794-49342089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 260
               

               
Conread position:
               
320-632
               

               
Cow position:
               
chr5:6438789-6439107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
189, 13
               

               
Conread position:
               
320-635
               

               
Cow position:
               
chr5:57755795-57756108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
78, 157
               

               
Conread position:
               
320-650
               

               
Cow position:
               
chr5:15479365-15479034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 13
               

               
Conread position:
               
320-650
               

               
Cow position:
               
chr5:59384446-59384782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
15, 62
               

               
Conread position:
               
320-651
               

               
Cow position:
               
chr5:17999255-17999585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
20, 181
               

               
Conread position:
               
320-655
               

               
Cow position:
               
chr5:36038767-36039101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
158, 17
               

               
Conread position:
               
320-672
               

               
Cow position:
               
chr5:11667944-11668300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 94
               

               
Conread position:
               
320-672
               

               
Cow position:
               
chr5:37941568-37941904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
70, 79
               

               
Conread position:
               
320-673
               

               
Cow position:
               
chr5:8023976-8024310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
266, 50
               

               
Conread position:
               
320-673
               

               
Cow position:
               
chr5:57074098-57074449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 45
               

               
Conread position:
               
320-677
               

               
Cow position:
               
chr5:58688-59048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
18, 78
               

               
Conread position:
               
320-677
               

               
Cow position:
               
chr5:47316737-47317090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
40, 17
               

               
Conread position:
               
321-520
               

               
Cow position:
               
chr5:36205928-36205729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
69, 110
               

               
Conread position:
               
321-522
               

               
Cow position:
               
chr5:40122370-40122573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
321-530
               

               
Cow position:
               
chr5:16668926-16668726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
321-535
               

               
Cow position:
               
chr5:59336009-59335793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
95, 10
               

               
Conread position:
               
321-537
               

               
Cow position:
               
chr5:35190342-35190132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
321-542
               

               
Cow position:
               
chr5:65552483-65552694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
58, 47
               

               
Conread position:
               
321-557
               

               
Cow position:
               
chr5:59627329-59627102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
321-558
               

               
Cow position:
               
chr5:44810000-44810238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
95, 16
               

               
Conread position:
               
321-567
               

               
Cow position:
               
chr5:31052625-31052372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
107, 12
               

               
Conread position:
               
321-570
               

               
Cow position:
               
chr5:17105080-17104843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 9
               

               
Conread position:
               
321-655
               

               
Cow position:
               
chr5:58519178-58519496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
69, 37
               

               
Conread position:
               
321-659
               

               
Cow position:
               
chr5:22242536-22242875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
161, 67
               

               
Conread position:
               
321-673
               

               
Cow position:
               
chr5:14550344-14550697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
69, 79
               

               
Conread position:
               
321-677
               

               
Cow position:
               
chr5:7057158-7057525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
17, 164
               

               
Conread position:
               
321-677
               

               
Cow position:
               
chr5:20128297-20127937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 135
               

               
Conread position:
               
321-677
               

               
Cow position:
               
chr5:30845342-30844994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
280, 19
               

               
Conread position:
               
321-677
               

               
Cow position:
               
chr5:38833352-38833004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
264, 43
               

               
Conread position:
               
322-476
               

               
Cow position:
               
chr5:48104498-48104344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
16, 69
               

               
Conread position:
               
322-528
               

               
Cow position:
               
chr5:63172812-63173012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
322-559
               

               
Cow position:
               
chr5:44163135-44163369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
17, 62
               

               
Conread position:
               
322-643
               

               
Cow position:
               
chr5:43403146-43402815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 123
               

               
Conread position:
               
322-645
               

               
Cow position:
               
chr5:57526688-57527005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
18, 146
               

               
Conread position:
               
322-649
               

               
Cow position:
               
chr5:55756177-55756516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
94, 15
               

               
Conread position:
               
322-654
               

               
Cow position:
               
chr5:35228907-35229223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
94, 40
               

               
Conread position:
               
322-670
               

               
Cow position:
               
chr5:39447288-39447642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 270
               

               
Conread position:
               
322-673
               

               
Cow position:
               
chr5:14903828-14904191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
15, 55
               

               
Conread position:
               
322-673
               

               
Cow position:
               
chr5:30487464-30487121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
68, 78
               

               
Conread position:
               
322-677
               

               
Cow position:
               
chr5:44028073-44028420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
249, 73
               

               
Conread position:
               
323-528
               

               
Cow position:
               
chr5:19561210-19561419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
67, 77
               

               
Conread position:
               
323-562
               

               
Cow position:
               
chr5:56860679-56860444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
67, 109
               

               
Conread position:
               
323-676
               

               
Cow position:
               
chr5:56524397-56524057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
246, 10
               

               
Conread position:
               
324-500
               

               
Cow position:
               
chr5:46479011-46479183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
9, 37
               

               
Conread position:
               
324-527
               

               
Cow position:
               
chr5:60100698-60100501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
7, 67
               

               
Conread position:
               
324-527
               

               
Cow position:
               
chr5:60154003-60153806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
7, 72
               

               
Conread position:
               
324-546
               

               
Cow position:
               
chr5:51246902-51247118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
145, 39
               

               
Conread position:
               
324-650
               

               
Cow position:
               
chr5:31475919-31475592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
66, 241
               

               
Conread position:
               
324-673
               

               
Cow position:
               
chr5:7044471-7044822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
229, 87
               

               
Conread position:
               
324-673
               

               
Cow position:
               
chr5:64175895-64176232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 66
               

               
Conread position:
               
324-673
               

               
Cow position:
               
chr5:74643449-74643786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
261, 71
               

               
Conread position:
               
324-677
               

               
Cow position:
               
chr5:30253975-30253622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
232, 75
               

               
Conread position:
               
324-677
               

               
Cow position:
               
chr5:47870819-47871166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
262, 73
               

               
Conread position:
               
325-673
               

               
Cow position:
               
chr5:18574415-18574055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
65, 8
               

               
Conread position:
               
325-677
               

               
Cow position:
               
chr5:11229437-11229788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 53
               

               
Conread position:
               
326-521
               

               
Cow position:
               
chr5:35394207-35394395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
326-617
               

               
Cow position:
               
chr5:33032403-33032114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
13, 44
               

               
Conread position:
               
326-668
               

               
Cow position:
               
chr5:34976606-34976954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
64, 126
               

               
Conread position:
               
326-672
               

               
Cow position:
               
chr5:52164941-52165293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 7
               

               
Conread position:
               
326-673
               

               
Cow position:
               
chr5:73167781-73168115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
314, 69
               

               
Conread position:
               
327-517
               

               
Cow position:
               
chr5:46421830-46421628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
327-565
               

               
Cow position:
               
chr5:51298484-51298719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
100, 6
               

               
Conread position:
               
327-650
               

               
Cow position:
               
chr5:5856093-5855776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
11, 239
               

               
Conread position:
               
327-657
               

               
Cow position:
               
chr5:17371462-17371803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
11, 126
               

               
Conread position:
               
327-676
               

               
Cow position:
               
chr5:55942146-55942514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 17
               

               
Conread position:
               
328-520
               

               
Cow position:
               
chr5:1766065-1766260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
10, 64
               

               
Conread position:
               
328-522
               

               
Cow position:
               
chr5:7675927-7676118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
328-595
               

               
Cow position:
               
chr5:20288027-20288301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 241
               

               
Conread position:
               
328-657
               

               
Cow position:
               
chr5:14920696-14921029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 9
               

               
Conread position:
               
328-673
               

               
Cow position:
               
chr5:2309327-2309675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
257, 110
               

               
Conread position:
               
328-676
               

               
Cow position:
               
chr5:62172629-62172298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
328-676
               

               
Cow position:
               
chr5:64139795-64139448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 57
               

               
Conread position:
               
328-677
               

               
Cow position:
               
chr5:45472506-45472149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
10, 31
               

               
Conread position:
               
328-677
               

               
Cow position:
               
chr5:56877701-56877369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
127, 62
               

               
Conread position:
               
329-486
               

               
Cow position:
               
chr5:64061243-64061092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
329-488
               

               
Cow position:
               
chr5:31234934-31234783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
48, 53
               

               
Conread position:
               
329-494
               

               
Cow position:
               
chr5:6245435-6245598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
329-497
               

               
Cow position:
               
chr5:43611929-43611760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
61, 35
               

               
Conread position:
               
329-497
               

               
Cow position:
               
chr5:67340111-67339945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
329-499
               

               
Cow position:
               
chr5:22957633-22957470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
329-499
               

               
Cow position:
               
chr5:63300308-63300138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
92, 66
               

               
Conread position:
               
329-500
               

               
Cow position:
               
chr5:25462313-25462147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
99, 66
               

               
Conread position:
               
329-501
               

               
Cow position:
               
chr5:75478688-75478857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
72, 31
               

               
Conread position:
               
329-505
               

               
Cow position:
               
chr5:38420838-38420655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
62, 166
               

               
Conread position:
               
329-507
               

               
Cow position:
               
chr5:37253653-37253481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
329-509
               

               
Cow position:
               
chr5:29895401-29895221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
329-517
               

               
Cow position:
               
chr5:6876735-6876926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
97, 162
               

               
Conread position:
               
329-560
               

               
Cow position:
               
chr5:33273930-33273693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
9, 86
               

               
Conread position:
               
329-562
               

               
Cow position:
               
chr5:30562158-30561929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
329-562
               

               
Cow position:
               
chr5:40241964-40241744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
329-562
               

               
Cow position:
               
chr5:55965662-55965897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
61, 122
               

               
Conread position:
               
329-566
               

               
Cow position:
               
chr5:22795436-22795207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
228, 40
               

               
Conread position:
               
329-568
               

               
Cow position:
               
chr5:50101146-50101386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
7, 68
               

               
Conread position:
               
329-583
               

               
Cow position:
               
chr5:26548912-26549164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 67
               

               
Conread position:
               
329-583
               

               
Cow position:
               
chr5:43408108-43408381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
9, 229
               

               
Conread position:
               
329-613
               

               
Cow position:
               
chr5:43922940-43923213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
10, 82
               

               
Conread position:
               
329-616
               

               
Cow position:
               
chr5:61456077-61455787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
34, 104
               

               
Conread position:
               
329-625
               

               
Cow position:
               
chr5:4280673-4280381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
193, 8
               

               
Conread position:
               
329-629
               

               
Cow position:
               
chr5:29912669-29912348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 29
               

               
Conread position:
               
329-637
               

               
Cow position:
               
chr5:19752531-19752226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
232, 66
               

               
Conread position:
               
329-645
               

               
Cow position:
               
chr5:3772072-3771761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
236, 62
               

               
Conread position:
               
329-650
               

               
Cow position:
               
chr5:35976724-35976429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
329-651
               

               
Cow position:
               
chr5:42845367-42845691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
133, 41
               

               
Conread position:
               
329-656
               

               
Cow position:
               
chr5:35459064-35459392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
11, 68
               

               
Conread position:
               
329-657
               

               
Cow position:
               
chr5:40152717-40152377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
61, 70
               

               
Conread position:
               
329-657
               

               
Cow position:
               
chr5:41294328-41293981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
38, 29
               

               
Conread position:
               
329-664
               

               
Cow position:
               
chr5:12557057-12557397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 71
               

               
Conread position:
               
329-670
               

               
Cow position:
               
chr5:9893895-9894241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
216, 40
               

               
Conread position:
               
329-670
               

               
Cow position:
               
chr5:42670643-42670968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
189, 59
               

               
Conread position:
               
329-670
               

               
Cow position:
               
chr5:60016393-60016055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 15
               

               
Conread position:
               
329-672
               

               
Cow position:
               
chr5:26262455-26262786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
256, 61
               

               
Conread position:
               
329-673
               

               
Cow position:
               
chr5:42050774-42050436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
247, 46
               

               
Conread position:
               
329-673
               

               
Cow position:
               
chr5:66257866-66257524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 64
               

               
Conread position:
               
329-676
               

               
Cow position:
               
chr5:12322581-12322919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 61
               

               
Conread position:
               
329-676
               

               
Cow position:
               
chr5:39937346-39936984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
82, 22
               

               
Conread position:
               
329-676
               

               
Cow position:
               
chr5:65941020-65941368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 72
               

               
Conread position:
               
329-676
               

               
Cow position:
               
chr5:66339303-66338961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
139, 49
               

               
Conread position:
               
329-677
               

               
Cow position:
               
chr5:5257057-5257411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 77
               

               
Conread position:
               
329-677
               

               
Cow position:
               
chr5:16025253-16025576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
329-677
               

               
Cow position:
               
chr5:21617685-21617339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
253, 66
               

               
Conread position:
               
329-677
               

               
Cow position:
               
chr5:28224672-28224333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
253, 56
               

               
Conread position:
               
329-677
               

               
Cow position:
               
chr5:34562239-34561893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
188, 56
               

               
Conread position:
               
329-677
               

               
Cow position:
               
chr5:35685163-35684819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 36
               

               
Conread position:
               
329-677
               

               
Cow position:
               
chr5:41009780-41010112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
61, 113
               

               
Conread position:
               
329-677
               

               
Cow position:
               
chr5:43858188-43858551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 162
               

               
Conread position:
               
329-677
               

               
Cow position:
               
chr5:44847795-44848145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 68
               

               
Conread position:
               
329-677
               

               
Cow position:
               
chr5:51053417-51053767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
7, 211
               

               
Conread position:
               
329-677
               

               
Cow position:
               
chr5:55068931-55068591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
8, 48
               

               
Conread position:
               
329-677
               

               
Cow position:
               
chr5:56071088-56070737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 65
               

               
Conread position:
               
329-677
               

               
Cow position:
               
chr5:57101567-57101895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 36
               

               
Conread position:
               
329-677
               

               
Cow position:
               
chr5:57934890-57935228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
256, 61
               

               
Conread position:
               
329-677
               

               
Cow position:
               
chr5:59115624-59115262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
16, 130
               

               
Conread position:
               
330-499
               

               
Cow position:
               
chr5:34787801-34787634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
330-506
               

               
Cow position:
               
chr5:49207100-49207274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
330-510
               

               
Cow position:
               
chr5:4824382-4824197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
60, 70
               

               
Conread position:
               
330-530
               

               
Cow position:
               
chr5:6086112-6086314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
330-542
               

               
Cow position:
               
chr5:26167648-26167439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
330-646
               

               
Cow position:
               
chr5:12873981-12873655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
44, 94
               

               
Conread position:
               
330-673
               

               
Cow position:
               
chr5:55956139-55955794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
139, 65
               

               
Conread position:
               
330-677
               

               
Cow position:
               
chr5:17086788-17087144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 75
               

               
Conread position:
               
330-677
               

               
Cow position:
               
chr5:26467856-26467504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 30
               

               
Conread position:
               
330-677
               

               
Cow position:
               
chr5:66972659-66972308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
331-531
               

               
Cow position:
               
chr5:1693864-1694060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
332-476
               

               
Cow position:
               
chr5:18579116-18578975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
107, 63
               

               
Conread position:
               
332-522
               

               
Cow position:
               
chr5:74887672-74887863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
332-529
               

               
Cow position:
               
chr5:53175022-53175228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
58, 191
               

               
Conread position:
               
332-583
               

               
Cow position:
               
chr5:45186888-45187142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
31, 132
               

               
Conread position:
               
332-658
               

               
Cow position:
               
chr5:56548793-56548478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
260, 63
               

               
Conread position:
               
332-672
               

               
Cow position:
               
chr5:25495124-25495465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 30
               

               
Conread position:
               
332-677
               

               
Cow position:
               
chr5:32338734-32339083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 17
               

               
Conread position:
               
332-677
               

               
Cow position:
               
chr5:65967510-65967847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
231, 20
               

               
Conread position:
               
333-503
               

               
Cow position:
               
chr5:21339034-21339213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
333-507
               

               
Cow position:
               
chr5:58401791-58401621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
333-513
               

               
Cow position:
               
chr5:30221551-30221732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
57, 117
               

               
Conread position:
               
333-520
               

               
Cow position:
               
chr5:24915299-24915488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
69, 57
               

               
Conread position:
               
333-523
               

               
Cow position:
               
chr5:57497200-57497388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
333-525
               

               
Cow position:
               
chr5:62996185-62995991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
333-541
               

               
Cow position:
               
chr5:54312825-54312619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
333-550
               

               
Cow position:
               
chr5:60948358-60948142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
69, 65
               

               
Conread position:
               
333-559
               

               
Cow position:
               
chr5:17566217-17566438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
88, 30
               

               
Conread position:
               
333-560
               

               
Cow position:
               
chr5:52108032-52108269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
54, 133
               

               
Conread position:
               
333-562
               

               
Cow position:
               
chr5:57062302-57062532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
45, 110
               

               
Conread position:
               
333-567
               

               
Cow position:
               
chr5:56613337-56613572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
333-570
               

               
Cow position:
               
chr5:46540834-46541066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
175, 62
               

               
Conread position:
               
333-603
               

               
Cow position:
               
chr5:8736051-8736330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
93, 57
               

               
Conread position:
               
333-617
               

               
Cow position:
               
chr5:63627314-63627584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
64, 20
               

               
Conread position:
               
333-624
               

               
Cow position:
               
chr5:43604365-43604077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
57, 67
               

               
Conread position:
               
333-638
               

               
Cow position:
               
chr5:34625174-34624882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
167, 57
               

               
Conread position:
               
333-638
               

               
Cow position:
               
chr5:61914797-61914490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
57, 123
               

               
Conread position:
               
333-640
               

               
Cow position:
               
chr5:32394828-32394519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
57, 86
               

               
Conread position:
               
333-650
               

               
Cow position:
               
chr5:71015659-71015972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
57, 65
               

               
Conread position:
               
333-651
               

               
Cow position:
               
chr5:31216827-31217151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
57, 66
               

               
Conread position:
               
333-655
               

               
Cow position:
               
chr5:33834266-33833948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
57, 67
               

               
Conread position:
               
333-671
               

               
Cow position:
               
chr5:26990613-26990279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
75, 49
               

               
Conread position:
               
333-673
               

               
Cow position:
               
chr5:3549579-3549901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
94, 57
               

               
Conread position:
               
333-673
               

               
Cow position:
               
chr5:25035028-25035358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 165
               

               
Conread position:
               
333-673
               

               
Cow position:
               
chr5:30303107-30302778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
228, 57
               

               
Conread position:
               
333-676
               

               
Cow position:
               
chr5:61726183-61725855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
306, 60
               

               
Conread position:
               
333-676
               

               
Cow position:
               
chr5:70951666-70951994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 79
               

               
Conread position:
               
333-677
               

               
Cow position:
               
chr5:3582781-3582456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
333-677
               

               
Cow position:
               
chr5:16937808-16938128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
313, 62
               

               
Conread position:
               
333-677
               

               
Cow position:
               
chr5:19335551-19335906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
333-677
               

               
Cow position:
               
chr5:30628927-30629277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 113
               

               
Conread position:
               
333-677
               

               
Cow position:
               
chr5:35969766-35969423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 193
               

               
Conread position:
               
333-677
               

               
Cow position:
               
chr5:64140764-64140411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
88, 62
               

               
Conread position:
               
333-677
               

               
Cow position:
               
chr5:64321988-64321634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 132
               

               
Conread position:
               
334-476
               

               
Cow position:
               
chr5:21520225-21520358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
334-536
               

               
Cow position:
               
chr5:69765809-69766004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
157, 0
               

               
Conread position:
               
334-633
               

               
Cow position:
               
chr5:69099944-69099649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 61
               

               
Conread position:
               
334-673
               

               
Cow position:
               
chr5:36855430-36855089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
25, 51
               

               
Conread position:
               
334-676
               

               
Cow position:
               
chr5:16893553-16893890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
239, 64
               

               
Conread position:
               
335-520
               

               
Cow position:
               
chr5:29599328-29599508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
177, 55
               

               
Conread position:
               
335-541
               

               
Cow position:
               
chr5:66659738-66659527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
335-559
               

               
Cow position:
               
chr5:53935330-53935547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
109, 55
               

               
Conread position:
               
335-562
               

               
Cow position:
               
chr5:50824807-50824589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
335-677
               

               
Cow position:
               
chr5:40109708-40109380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
250, 56
               

               
Conread position:
               
335-677
               

               
Cow position:
               
chr5:53835945-53835595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 91
               

               
Conread position:
               
336-560
               

               
Cow position:
               
chr5:18062087-18062320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
336-673
               

               
Cow position:
               
chr5:11539829-11540163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
66, 54
               

               
Conread position:
               
337-537
               

               
Cow position:
               
chr5:60523949-60523757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
337-546
               

               
Cow position:
               
chr5:75227991-75228186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
337-555
               

               
Cow position:
               
chr5:12654687-12654907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
120, 58
               

               
Conread position:
               
337-559
               

               
Cow position:
               
chr5:4267882-4267670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
337-562
               

               
Cow position:
               
chr5:51065737-51065527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
337-645
               

               
Cow position:
               
chr5:41885136-41884849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
265, 58
               

               
Conread position:
               
337-671
               

               
Cow position:
               
chr5:13717338-13717684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
28, 69
               

               
Conread position:
               
337-673
               

               
Cow position:
               
chr5:29828270-29827934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 116
               

               
Conread position:
               
337-677
               

               
Cow position:
               
chr5:44993817-44994157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 178
               

               
Conread position:
               
337-677
               

               
Cow position:
               
chr5:50942938-50943269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
18, 55
               

               
Conread position:
               
338-501
               

               
Cow position:
               
chr5:9559634-9559479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
338-530
               

               
Cow position:
               
chr5:44734506-44734696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
338-559
               

               
Cow position:
               
chr5:72045456-72045674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
82, 18
               

               
Conread position:
               
338-562
               

               
Cow position:
               
chr5:5017592-5017371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
81, 30
               

               
Conread position:
               
338-677
               

               
Cow position:
               
chr5:65776156-65776501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
51, 235
               

               
Conread position:
               
339-646
               

               
Cow position:
               
chr5:65136477-65136191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
339-650
               

               
Cow position:
               
chr5:63234602-63234921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
7, 184
               

               
Conread position:
               
339-677
               

               
Cow position:
               
chr5:67932246-67932583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
51, 194
               

               
Conread position:
               
340-650
               

               
Cow position:
               
chr5:66551673-66551994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
340-677
               

               
Cow position:
               
chr5:20779180-20779505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
79, 55
               

               
Conread position:
               
340-677
               

               
Cow position:
               
chr5:50600265-50599937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 70
               

               
Conread position:
               
341-508
               

               
Cow position:
               
chr5:52029622-52029458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
22, 57
               

               
Conread position:
               
341-611
               

               
Cow position:
               
chr5:57156082-57156367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
49, 119
               

               
Conread position:
               
341-677
               

               
Cow position:
               
chr5:47696242-47696561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
230, 54
               

               
Conread position:
               
342-657
               

               
Cow position:
               
chr5:53947116-53946796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
74, 109
               

               
Conread position:
               
342-669
               

               
Cow position:
               
chr5:74581003-74580685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
260, 14
               

               
Conread position:
               
344-500
               

               
Cow position:
               
chr5:4981660-4981509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
344-656
               

               
Cow position:
               
chr5:17554820-17555126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
156, 51
               

               
Conread position:
               
344-657
               

               
Cow position:
               
chr5:64523649-64523966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
100, 76
               

               
Conread position:
               
345-503
               

               
Cow position:
               
chr5:56754146-56753989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
345-671
               

               
Cow position:
               
chr5:68719081-68718763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
49, 34
               

               
Conread position:
               
345-672
               

               
Cow position:
               
chr5:57328011-57327682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
45, 55
               

               
Conread position:
               
345-677
               

               
Cow position:
               
chr5:45397779-45397459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 23
               

               
Conread position:
               
348-542
               

               
Cow position:
               
chr5:5847633-5847828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
28, 177
               

               
Conread position:
               
348-583
               

               
Cow position:
               
chr5:72006286-72006515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
80, 20
               

               
Conread position:
               
348-664
               

               
Cow position:
               
chr5:33414197-33414519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
46, 142
               

               
Conread position:
               
348-670
               

               
Cow position:
               
chr5:37646286-37645962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
147, 66
               

               
Conread position:
               
348-672
               

               
Cow position:
               
chr5:29352921-29353242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
209, 42
               

               
Conread position:
               
348-673
               

               
Cow position:
               
chr5:12351601-12351903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
13, 43
               

               
Conread position:
               
348-673
               

               
Cow position:
               
chr5:12673269-12673577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
348-677
               

               
Cow position:
               
chr5:26097501-26097176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
42, 80
               

               
Conread position:
               
350-655
               

               
Cow position:
               
chr5:16939383-16939676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
40, 50
               

               
Conread position:
               
350-676
               

               
Cow position:
               
chr5:17767944-17768261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
50, 21
               

               
Conread position:
               
350-677
               

               
Cow position:
               
chr5:35826807-35826484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 41
               

               
Conread position:
               
351-670
               

               
Cow position:
               
chr5:64168029-64168354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
43, 151
               

               
Conread position:
               
351-677
               

               
Cow position:
               
chr5:65753068-65752737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 50
               

               
Conread position:
               
352-600
               

               
Cow position:
               
chr5:49501611-49501864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
38, 224
               

               
Conread position:
               
352-677
               

               
Cow position:
               
chr5:41713495-41713183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
120, 43
               

               
Conread position:
               
353-677
               

               
Cow position:
               
chr5:57419590-57419912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
91, 64
               

               
Conread position:
               
354-657
               

               
Cow position:
               
chr5:55019499-55019194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
66, 43
               

               
Conread position:
               
355-673
               

               
Cow position:
               
chr5:3003110-3002802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
55, 39
               

               
Conread position:
               
357-614
               

               
Cow position:
               
chr5:55795768-55796017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
137, 38
               

               
Conread position:
               
361-578
               

               
Cow position:
               
chr5:57686543-57686756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
213, 34
               

               
Conread position:
               
362-655
               

               
Cow position:
               
chr5:46683755-46684044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
158, 85
               

               
Conread position:
               
367-657
               

               
Cow position:
               
chr5:55232627-55232894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
79, 23
               

               
Conread position:
               
378-677
               

               
Cow position:
               
chr5:57626968-57626687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
166, 48
               

               
Conread position:
               
382-677
               

               
Cow position:
               
chr5:29771699-29771399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
166, 27
               

               
Conread position:
               
385-547
               

               
Cow position:
               
chr5:35647517-35647355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
385-557
               

               
Cow position:
               
chr5:43844495-43844661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
59, 24
               

               
Conread position:
               
387-677
               

               
Cow position:
               
chr5:9089854-9090139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
34, 71
               

               
Conread position:
               
387-677
               

               
Cow position:
               
chr5:46509692-46509985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 252
               

               
Conread position:
               
388-514
               

               
Cow position:
               
chr5:1090651-1090774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
106, 0
               

               
Conread position:
               
388-522
               

               
Cow position:
               
chr5:14354246-14354113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
126, 0
               

               
Conread position:
               
388-539
               

               
Cow position:
               
chr5:42623007-42623158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
31, 103
               

               
Conread position:
               
388-562
               

               
Cow position:
               
chr5:55129514-55129340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
388-562
               

               
Cow position:
               
chr5:56212075-56211902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
43, 32
               

               
Conread position:
               
388-562
               

               
Cow position:
               
chr5:57489780-57489948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
388-607
               

               
Cow position:
               
chr5:24136885-24136664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
185, 78
               

               
Conread position:
               
388-619
               

               
Cow position:
               
chr5:45419966-45420195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
176, 0
               

               
Conread position:
               
388-628
               

               
Cow position:
               
chr5:41981543-41981300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
28, 116
               

               
Conread position:
               
388-638
               

               
Cow position:
               
chr5:31640594-31640340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
189, 50
               

               
Conread position:
               
388-650
               

               
Cow position:
               
chr5:1087023-1087288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
62, 185
               

               
Conread position:
               
388-650
               

               
Cow position:
               
chr5:54086708-54086451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
388-673
               

               
Cow position:
               
chr5:54060447-54060161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
205, 118
               

               
Conread position:
               
388-673
               

               
Cow position:
               
chr5:58856273-58855988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
247, 100
               

               
Conread position:
               
388-676
               

               
Cow position:
               
chr5:63426833-63427124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
26, 20
               

               
Conread position:
               
388-677
               

               
Cow position:
               
chr5:26476847-26477131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
184, 142
               

               
Conread position:
               
388-677
               

               
Cow position:
               
chr5:56317460-56317179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
109, 0
               

               
Conread position:
               
388-677
               

               
Cow position:
               
chr5:61810942-61810668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
125, 0
               

               
Conread position:
               
389-670
               

               
Cow position:
               
chr5:58446978-58446691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 181
               

               
Conread position:
               
389-676
               

               
Cow position:
               
chr5:57737269-57736992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
167, 0
               

               
Conread position:
               
389-677
               

               
Cow position:
               
chr5:5110899-5111192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 190
               

               
Conread position:
               
389-677
               

               
Cow position:
               
chr5:44752137-44752430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
131, 218
               

               
Conread position:
               
390-562
               

               
Cow position:
               
chr5:27293716-27293887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
390-677
               

               
Cow position:
               
chr5:43929567-43929855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
187, 128
               

               
Conread position:
               
391-604
               

               
Cow position:
               
chr5:56338853-56339066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
194, 173
               

               
Conread position:
               
393-546
               

               
Cow position:
               
chr5:26723614-26723461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
24, 76
               

               
Conread position:
               
393-657
               

               
Cow position:
               
chr5:458654-458393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
394-677
               

               
Cow position:
               
chr5:45273336-45273620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
15, 48
               

               
Conread position:
               
395-562
               

               
Cow position:
               
chr5:33155984-33155812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
5, 104
               

               
Conread position:
               
399-668
               

               
Cow position:
               
chr5:23678543-23678814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
172, 57
               

               
Conread position:
               
399-677
               

               
Cow position:
               
chr5:54311496-54311213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
186, 171
               

               
Conread position:
               
400-673
               

               
Cow position:
               
chr5:6683207-6683470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
19, 116
               

               
Conread position:
               
401-677
               

               
Cow position:
               
chr5:52000377-52000103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
16, 6
               

               
Conread position:
               
402-650
               

               
Cow position:
               
chr5:75436730-75436979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
12, 25
               

               
Conread position:
               
403-562
               

               
Cow position:
               
chr5:60599047-60599208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
17, 45
               

               
Conread position:
               
404-672
               

               
Cow position:
               
chr5:45574775-45574501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 164
               

               
Conread position:
               
404-676
               

               
Cow position:
               
chr5:29844436-29844161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
22, 63
               

               
Conread position:
               
405-672
               

               
Cow position:
               
chr5:37814778-37814509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
184, 5
               

               
Conread position:
               
405-677
               

               
Cow position:
               
chr5:49440722-49440991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
165, 35
               

               
Conread position:
               
407-676
               

               
Cow position:
               
chr5:71494973-71494699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
171, 152
               

               
Conread position:
               
407-677
               

               
Cow position:
               
chr5:37646392-37646665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
175, 60
               

               
Conread position:
               
408-652
               

               
Cow position:
               
chr5:12556469-12556234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
36, 58
               

               
Conread position:
               
408-673
               

               
Cow position:
               
chr5:65588850-65588588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
177, 116
               

               
Conread position:
               
410-512
               

               
Cow position:
               
chr5:57785659-57785556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
104
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
411-522
               

               
Cow position:
               
chr5:51125860-51125972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
113
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
411-539
               

               
Cow position:
               
chr5:55850028-55849905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
411-547
               

               
Cow position:
               
chr5:38169043-38168906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
411-559
               

               
Cow position:
               
chr5:57230189-57230338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
411-562
               

               
Cow position:
               
chr5:24069535-24069387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
130, 21
               

               
Conread position:
               
411-569
               

               
Cow position:
               
chr5:65679825-65679980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
411-582
               

               
Cow position:
               
chr5:71724447-71724279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
64, 73
               

               
Conread position:
               
411-598
               

               
Cow position:
               
chr5:17602057-17602241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
165, 97
               

               
Conread position:
               
411-656
               

               
Cow position:
               
chr5:62378928-62378693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
174, 80
               

               
Conread position:
               
411-671
               

               
Cow position:
               
chr5:34301064-34300803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
61, 92
               

               
Conread position:
               
411-673
               

               
Cow position:
               
chr5:23168678-23168940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
157, 223
               

               
Conread position:
               
411-677
               

               
Cow position:
               
chr5:4031838-4032113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
411-677
               

               
Cow position:
               
chr5:8820865-8821127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
148, 91
               

               
Conread position:
               
411-677
               

               
Cow position:
               
chr5:25230869-25231123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
11, 45
               

               
Conread position:
               
411-677
               

               
Cow position:
               
chr5:46425708-46425970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
37, 9
               

               
Conread position:
               
411-677
               

               
Cow position:
               
chr5:63865956-63865676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
18, 104
               

               
Conread position:
               
411-677
               

               
Cow position:
               
chr5:66366663-66366399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
33, 86
               

               
Conread position:
               
412-563
               

               
Cow position:
               
chr5:74974182-74974333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
412-659
               

               
Cow position:
               
chr5:359790-360045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
15, 39
               

               
Conread position:
               
412-673
               

               
Cow position:
               
chr5:64591948-64592207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
173, 163
               

               
Conread position:
               
412-675
               

               
Cow position:
               
chr5:20783770-20783507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
7, 101
               

               
Conread position:
               
412-677
               

               
Cow position:
               
chr5:50533241-50533506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
150, 76
               

               
Conread position:
               
414-559
               

               
Cow position:
               
chr5:44874337-44874193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
414-615
               

               
Cow position:
               
chr5:40242189-40241985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
12, 56
               

               
Conread position:
               
414-677
               

               
Cow position:
               
chr5:14629660-14629932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
414-677
               

               
Cow position:
               
chr5:43457386-43457635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
66, 93
               

               
Conread position:
               
414-677
               

               
Cow position:
               
chr5:72564909-72564641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
171, 0
               

               
Conread position:
               
415-517
               

               
Cow position:
               
chr5:17644484-17644586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
103
               

               
Alignm identity:
               
84
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
415-547
               

               
Cow position:
               
chr5:46704154-46704287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
415-571
               

               
Cow position:
               
chr5:9170440-9170594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
154, 17
               

               
Conread position:
               
415-572
               

               
Cow position:
               
chr5:9233844-9234002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
28, 156
               

               
Conread position:
               
415-650
               

               
Cow position:
               
chr5:19524044-19523808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
167, 0
               

               
Conread position:
               
415-655
               

               
Cow position:
               
chr5:59872936-59873187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
107, 241
               

               
Conread position:
               
415-670
               

               
Cow position:
               
chr5:7698144-7697893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 55
               

               
Conread position:
               
415-672
               

               
Cow position:
               
chr5:53710545-53710808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
29, 34
               

               
Conread position:
               
415-676
               

               
Cow position:
               
chr5:37189953-37190213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
17, 34
               

               
Conread position:
               
415-677
               

               
Cow position:
               
chr5:7723809-7723551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
232, 157
               

               
Conread position:
               
415-677
               

               
Cow position:
               
chr5:34528690-34528442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
256, 30
               

               
Conread position:
               
415-677
               

               
Cow position:
               
chr5:53855850-53855575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
81, 266
               

               
Conread position:
               
416-514
               

               
Cow position:
               
chr5:60126833-60126735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
99
               

               
Alignm identity:
               
87
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
416-523
               

               
Cow position:
               
chr5:30638435-30638543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
109
               

               
Alignm identity:
               
88
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
416-530
               

               
Cow position:
               
chr5:36823026-36822916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
115
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
416-555
               

               
Cow position:
               
chr5:17604989-17605130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
416-586
               

               
Cow position:
               
chr5:56287359-56287527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
135, 0
               

               
Conread position:
               
416-612
               

               
Cow position:
               
chr5:35982592-35982793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
10, 192
               

               
Conread position:
               
416-634
               

               
Cow position:
               
chr5:67118563-67118340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
169, 0
               

               
Conread position:
               
416-648
               

               
Cow position:
               
chr5:30805307-30805077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
169, 80
               

               
Conread position:
               
416-648
               

               
Cow position:
               
chr5:47323605-47323375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
416-649
               

               
Cow position:
               
chr5:37808520-37808760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
156, 0
               

               
Conread position:
               
416-650
               

               
Cow position:
               
chr5:3639354-3639578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
416-650
               

               
Cow position:
               
chr5:26094023-26094254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
174, 0
               

               
Conread position:
               
416-654
               

               
Cow position:
               
chr5:54375359-54375603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 148
               

               
Conread position:
               
416-657
               

               
Cow position:
               
chr5:35126198-35125954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
172, 0
               

               
Conread position:
               
416-657
               

               
Cow position:
               
chr5:69731643-69731408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
160, 78
               

               
Conread position:
               
416-665
               

               
Cow position:
               
chr5:59325698-59325944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
7, 102
               

               
Conread position:
               
416-668
               

               
Cow position:
               
chr5:60183949-60183691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 162
               

               
Conread position:
               
416-669
               

               
Cow position:
               
chr5:20422051-20422295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
169, 10
               

               
Conread position:
               
416-671
               

               
Cow position:
               
chr5:15426681-15426416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
152, 114
               

               
Conread position:
               
416-672
               

               
Cow position:
               
chr5:21039841-21040090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
172, 10
               

               
Conread position:
               
416-676
               

               
Cow position:
               
chr5:63964025-63964287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
68, 23
               

               
Conread position:
               
416-677
               

               
Cow position:
               
chr5:6045439-6045172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
416-677
               

               
Cow position:
               
chr5:6503738-6503999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
143, 158
               

               
Conread position:
               
416-677
               

               
Cow position:
               
chr5:30949772-30950035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
169, 184
               

               
Conread position:
               
416-677
               

               
Cow position:
               
chr5:41545750-41546008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
165, 216
               

               
Conread position:
               
416-677
               

               
Cow position:
               
chr5:54350218-54350487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
27, 33
               

               
Conread position:
               
416-677
               

               
Cow position:
               
chr5:54767766-54768029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
170, 116
               

               
Conread position:
               
417-520
               

               
Cow position:
               
chr5:1946973-1946870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
104
               

               
Alignm identity:
               
86
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
417-534
               

               
Cow position:
               
chr5:51490460-51490577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
118
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
417-536
               

               
Cow position:
               
chr5:60595988-60596108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
66, 79
               

               
Conread position:
               
417-536
               

               
Cow position:
               
chr5:75760133-75760251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
417-559
               

               
Cow position:
               
chr5:4166782-4166642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
417-562
               

               
Cow position:
               
chr5:9369130-9369273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
417-628
               

               
Cow position:
               
chr5:67212502-67212286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
157, 21
               

               
Conread position:
               
417-650
               

               
Cow position:
               
chr5:14473261-14473505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
417-650
               

               
Cow position:
               
chr5:50575925-50575693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
417-676
               

               
Cow position:
               
chr5:16206013-16206273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 100
               

               
Conread position:
               
417-677
               

               
Cow position:
               
chr5:7755429-7755681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
127, 19
               

               
Conread position:
               
418-665
               

               
Cow position:
               
chr5:34463439-34463693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
26, 34
               

               
Conread position:
               
419-673
               

               
Cow position:
               
chr5:43992464-43992206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 0
               

               
Conread position:
               
419-677
               

               
Cow position:
               
chr5:63987306-63987570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
137, 70
               

               
Conread position:
               
420-583
               

               
Cow position:
               
chr5:56517243-56517080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
95, 75
               

               
Conread position:
               
420-637
               

               
Cow position:
               
chr5:69636363-69636156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
143, 0
               

               
Conread position:
               
420-640
               

               
Cow position:
               
chr5:37757700-37757908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
420-651
               

               
Cow position:
               
chr5:46610959-46611191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
93, 151
               

               
Conread position:
               
420-656
               

               
Cow position:
               
chr5:35784850-35785074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
45, 36
               

               
Conread position:
               
420-657
               

               
Cow position:
               
chr5:74016079-74015841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
169, 94
               

               
Conread position:
               
420-670
               

               
Cow position:
               
chr5:27411262-27411504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
22, 28
               

               
Conread position:
               
420-671
               

               
Cow position:
               
chr5:4710013-4710258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
233, 80
               

               
Conread position:
               
420-671
               

               
Cow position:
               
chr5:76366156-76366405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
184, 227
               

               
Conread position:
               
420-673
               

               
Cow position:
               
chr5:39258644-39258408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
232, 69
               

               
Conread position:
               
420-673
               

               
Cow position:
               
chr5:41452533-41452779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
160, 72
               

               
Conread position:
               
420-673
               

               
Cow position:
               
chr5:46322664-46322925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
96, 110
               

               
Conread position:
               
420-677
               

               
Cow position:
               
chr5:7193555-7193312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
165, 24
               

               
Conread position:
               
420-677
               

               
Cow position:
               
chr5:27102655-27102913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
134, 125
               

               
Conread position:
               
420-677
               

               
Cow position:
               
chr5:39875263-39875004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
140, 154
               

               
Conread position:
               
420-677
               

               
Cow position:
               
chr5:44726195-44726445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
140, 0
               

               
Conread position:
               
420-677
               

               
Cow position:
               
chr5:56680395-56680128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
420-677
               

               
Cow position:
               
chr5:60747142-60747395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
165, 42
               

               
Conread position:
               
420-677
               

               
Cow position:
               
chr5:62639043-62638788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
161, 130
               

               
Conread position:
               
420-677
               

               
Cow position:
               
chr5:71454473-71454714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
245, 122
               

               
Conread position:
               
421-673
               

               
Cow position:
               
chr5:4221116-4220869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
170, 105
               

               
Conread position:
               
421-676
               

               
Cow position:
               
chr5:34441642-34441909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
112, 0
               

               
Conread position:
               
421-677
               

               
Cow position:
               
chr5:72006727-72006973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
422-570
               

               
Cow position:
               
chr5:52083480-52083337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
423-650
               

               
Cow position:
               
chr5:51935325-51935101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
423-673
               

               
Cow position:
               
chr5:4218993-4218760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
165, 37
               

               
Conread position:
               
423-673
               

               
Cow position:
               
chr5:62142812-62142555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
138, 152
               

               
Conread position:
               
423-673
               

               
Cow position:
               
chr5:67244054-67243814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
53, 83
               

               
Conread position:
               
423-677
               

               
Cow position:
               
chr5:6528821-6528563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
39, 179
               

               
Conread position:
               
423-677
               

               
Cow position:
               
chr5:57575909-57575650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
423-677
               

               
Cow position:
               
chr5:65932807-65933049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
221, 125
               

               
Conread position:
               
424-672
               

               
Cow position:
               
chr5:60715233-60715472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
426-578
               

               
Cow position:
               
chr5:60189126-60188973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
76, 137
               

               
Conread position:
               
426-624
               

               
Cow position:
               
chr5:1461222-1461021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
146, 129
               

               
Conread position:
               
426-673
               

               
Cow position:
               
chr5:15721941-15722181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 0
               

               
Conread position:
               
426-677
               

               
Cow position:
               
chr5:6286300-6286543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 0
               

               
Conread position:
               
426-677
               

               
Cow position:
               
chr5:26377535-26377786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
57, 25
               

               
Conread position:
               
426-677
               

               
Cow position:
               
chr5:29903390-29903641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
216, 145
               

               
Conread position:
               
426-677
               

               
Cow position:
               
chr5:45804193-45803944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 32
               

               
Conread position:
               
426-677
               

               
Cow position:
               
chr5:50821916-50821663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
159, 120
               

               
Conread position:
               
426-677
               

               
Cow position:
               
chr5:63992039-63992282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
189, 141
               

               
Conread position:
               
426-677
               

               
Cow position:
               
chr5:72951977-72951720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
134, 0
               

               
Conread position:
               
427-529
               

               
Cow position:
               
chr5:35833541-35833439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
103
               

               
Alignm identity:
               
87
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
427-539
               

               
Cow position:
               
chr5:40237343-40237231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
113
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
427-673
               

               
Cow position:
               
chr5:27171861-27172095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
158, 94
               

               
Conread position:
               
428-559
               

               
Cow position:
               
chr5:21223454-21223324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
109, 0
               

               
Conread position:
               
429-557
               

               
Cow position:
               
chr5:26253043-26253171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
429-560
               

               
Cow position:
               
chr5:45574235-45574366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
429-599
               

               
Cow position:
               
chr5:66531048-66530876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
159, 39
               

               
Conread position:
               
429-672
               

               
Cow position:
               
chr5:15598108-15598347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
429-673
               

               
Cow position:
               
chr5:28927464-28927704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
132, 63
               

               
Conread position:
               
429-677
               

               
Cow position:
               
chr5:19813090-19813334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
127, 163
               

               
Conread position:
               
432-625
               

               
Cow position:
               
chr5:26150294-26150488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
153, 68
               

               
Conread position:
               
432-673
               

               
Cow position:
               
chr5:42744907-42744673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
432-677
               

               
Cow position:
               
chr5:48009732-48009968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
154, 99
               

               
Conread position:
               
436-673
               

               
Cow position:
               
chr5:67540078-67540318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
156, 0
               

               
Conread position:
               
439-664
               

               
Cow position:
               
chr5:56636015-56635793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
163, 109
               

               
Conread position:
               
439-668
               

               
Cow position:
               
chr5:58793487-58793724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
138, 125
               

               
Conread position:
               
440-676
               

               
Cow position:
               
chr5:65883654-65883894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
120, 7
               

               
Conread position:
               
440-677
               

               
Cow position:
               
chr5:32696704-32696939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
145, 34
               

               
Conread position:
               
441-677
               

               
Cow position:
               
chr5:20407560-20407786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
149, 0
               

               
Conread position:
               
442-677
               

               
Cow position:
               
chr5:59717853-59717629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
50, 75
               

               
Conread position:
               
447-665
               

               
Cow position:
               
chr5:21534999-21535222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
110, 98
               

               
Conread position:
               
448-671
               

               
Cow position:
               
chr5:57561634-57561404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
113, 0
               

               
Conread position:
               
453-677
               

               
Cow position:
               
chr5:31918748-31918532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
132, 43
               

               
Conread position:
               
455-672
               

               
Cow position:
               
chr5:40039662-40039884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
37, 65
               

               
Conread position:
               
455-677
               

               
Cow position:
               
chr5:43737859-43738072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
456-677
               

               
Cow position:
               
chr5:36255154-36255379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
54, 80
               

               
Conread position:
               
458-649
               

               
Cow position:
               
chr5:34050219-34050025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
127, 0
               

               
Conread position:
               
458-650
               

               
Cow position:
               
chr5:61840289-61840100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
458-677
               

               
Cow position:
               
chr5:68264857-68265079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
102, 186
               

               
Conread position:
               
461-676
               

               
Cow position:
               
chr5:16509204-16508977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
462-677
               

               
Cow position:
               
chr5:69520988-69520774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
123, 148
               

               
Conread position:
               
463-667
               

               
Cow position:
               
chr5:740844-741049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
92, 30
               

               
Conread position:
               
463-677
               

               
Cow position:
               
chr5:56820168-56820381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
122, 24
               

               
Conread position:
               
464-677
               

               
Cow position:
               
chr5:73080300-73080083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
33, 168
               

               
Conread position:
               
467-650
               

               
Cow position:
               
chr5:64137348-64137162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
467-676
               

               
Cow position:
               
chr5:65601549-65601342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
69, 62
               

               
Conread position:
               
467-677
               

               
Cow position:
               
chr5:32153227-32153434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
84, 109
               

               
Conread position:
               
474-673
               

               
Cow position:
               
chr5:46122268-46122465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
108, 74
               

               
Conread position:
               
474-677
               

               
Cow position:
               
chr5:31144702-31144906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
111, 124
               

               
Conread position:
               
476-677
               

               
Cow position:
               
chr5:34638967-34638765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
109, 83
               

               
Conread position:
               
479-677
               

               
Cow position:
               
chr5:28926100-28926303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
79, 96
               

               
Conread position:
               
481-656
               

               
Cow position:
               
chr5:32140630-32140806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
104, 88
               

               
Conread position:
               
481-676
               

               
Cow position:
               
chr5:13691489-13691689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
79, 117
               

               
Conread position:
               
482-676
               

               
Cow position:
               
chr5:21920457-21920253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
92, 29
               

               
Conread position:
               
485-675
               

               
Cow position:
               
chr5:6670119-6670311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
100, 131
               

               
Conread position:
               
487-640
               

               
Cow position:
               
chr5:34107307-34107154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
98, 15
               

               
Conread position:
               
491-677
               

               
Cow position:
               
chr5:21964357-21964166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
95, 75
               

               
Conread position:
               
492-672
               

               
Cow position:
               
chr5:64823244-64823425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
69, 126
               

               
Conread position:
               
505-648
               

               
Cow position:
               
chr5:34922903-34923040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
506-672
               

               
Cow position:
               
chr5:51800919-51801087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
79, 60
               

               
Conread position:
               
506-676
               

               
Cow position:
               
chr5:12709942-12709767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
79, 66
               

               
Conread position:
               
507-677
               

               
Cow position:
               
chr5:24485382-24485555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
73, 59
               

               
Conread position:
               
510-672
               

               
Cow position:
               
chr5:4797274-4797430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
75, 39
               

               
Conread position:
               
510-673
               

               
Cow position:
               
chr5:60126422-60126258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
51, 65
               

               
Conread position:
               
510-675
               

               
Cow position:
               
chr5:62826703-62826871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
9, 16
               

               
Conread position:
               
510-677
               

               
Cow position:
               
chr5:34115702-34115531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
12, 19
               

               
Conread position:
               
513-671
               

               
Cow position:
               
chr5:27015726-27015571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
65, 50
               

               
Conread position:
               
514-677
               

               
Cow position:
               
chr5:7921359-7921519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
515-655
               

               
Cow position:
               
chr5:29860395-29860250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
520-677
               

               
Cow position:
               
chr5:38647394-38647239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
65, 45
               

               
Conread position:
               
534-677
               

               
Cow position:
               
chr5:9859686-9859832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
37, 94
               
Show alignments to all cow chromosomes.